RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 ZNF408Q9H9D4 720 aa14.24□□□□□ -0.13
COL11A1-207ENST00000465209 RIMBP2O15034 1052 aa14.23□□□□□ -0.13
COL11A1-207ENST00000465209 RGS19P49795 217 aa14.23□□□□□ -0.13
COL11A1-207ENST00000465209 TBC1D10BQ4KMP7 808 aaPredicted RBP14.23□□□□□ -0.13
COL11A1-207ENST00000465209 ZBTB38Q8NAP3 1195 aaPredicted RBP14.23□□□□□ -0.13
COL11A1-207ENST00000465209 PHAXQ9H814 394 aaKnown RBP14.23□□□□□ -0.13
COL11A1-207ENST00000465209 SEC31BQ9NQW1 1179 aa14.23□□□□□ -0.13
COL11A1-207ENST00000465209 AKAP11Q9UKA4 1901 aa14.22□□□□□ -0.13
COL11A1-207ENST00000465209 ADM5C9JUS6 153 aa14.22□□□□□ -0.13
COL11A1-207ENST00000465209 C6orf229H3BNL8 230 aa14.22□□□□□ -0.13
COL11A1-207ENST00000465209 VIL1P09327 827 aaKnown RBP14.22□□□□□ -0.13
COL11A1-207ENST00000465209 RPS8P62241 208 aaKnown RBP14.22□□□□□ -0.13
COL11A1-207ENST00000465209 WDR43Q15061 677 aaKnown RBP eCLIP14.22□□□□□ -0.13
COL11A1-207ENST00000465209 DOK7Q18PE1 504 aa14.22□□□□□ -0.13
COL11A1-207ENST00000465209 FAM161AQ3B820 660 aa14.22□□□□□ -0.13
COL11A1-207ENST00000465209 HUNKP57058 714 aa14.21□□□□□ -0.13
COL11A1-207ENST00000465209 NOGQ13253 232 aa14.21□□□□□ -0.13
COL11A1-207ENST00000465209 KRT26Q7Z3Y9 468 aa14.21□□□□□ -0.13
COL11A1-207ENST00000465209 EYA3Q99504 573 aa14.21□□□□□ -0.13
COL11A1-207ENST00000465209 MCOLN1Q9GZU1 580 aa14.21□□□□□ -0.13
COL11A1-207ENST00000465209 IFT57Q9NWB7 429 aa14.21□□□□□ -0.13
COL11A1-207ENST00000465209 ASTN2O75129 1339 aaPredicted RBP14.2□□□□□ -0.14
COL11A1-207ENST00000465209 PAPPA2Q9BXP8 1791 aa14.2□□□□□ -0.14
COL11A1-207ENST00000465209 PCCAP05165 728 aaPredicted RBP14.2□□□□□ -0.14
COL11A1-207ENST00000465209 KIF4BQ2VIQ3 1234 aa14.2□□□□□ -0.14
COL11A1-207ENST00000465209 CCDC191Q8NCU4 936 aa14.2□□□□□ -0.14
COL11A1-207ENST00000465209 PRKRIP1Q9H875 184 aaPredicted RBP14.2□□□□□ -0.14
COL11A1-207ENST00000465209 GBA2Q9HCG7 927 aaPredicted RBP14.2□□□□□ -0.14
COL11A1-207ENST00000465209 UFL1O94874 794 aa14.19□□□□□ -0.14
COL11A1-207ENST00000465209 ZNF280AP59817 542 aaPredicted RBP14.19□□□□□ -0.14
COL11A1-207ENST00000465209 GOLGA2Q08379 1002 aa14.19□□□□□ -0.14
COL11A1-207ENST00000465209 RGMBQ6NW40 437 aa14.19□□□□□ -0.14
COL11A1-207ENST00000465209 RIC3Q7Z5B4 369 aa14.19□□□□□ -0.14
COL11A1-207ENST00000465209 GMLQ99445 158 aa14.19□□□□□ -0.14
COL11A1-207ENST00000465209 MYD88Q99836 296 aa14.19□□□□□ -0.14
COL11A1-207ENST00000465209 GGA3Q9NZ52 723 aa14.19□□□□□ -0.14
COL11A1-207ENST00000465209 CCDC85CA6NKD9 419 aa14.18□□□□□ -0.14
COL11A1-207ENST00000465209 APAF1O14727 1248 aa14.18□□□□□ -0.14
COL11A1-207ENST00000465209 PDE8AO60658 829 aa14.18□□□□□ -0.14
COL11A1-207ENST00000465209 C8orf58Q8NAV2 365 aa14.18□□□□□ -0.14
COL11A1-207ENST00000465209 A0A1B0GUL6 1792 aa14.17□□□□□ -0.14
COL11A1-207ENST00000465209 SLC10A3P09131 477 aa14.17□□□□□ -0.14
COL11A1-207ENST00000465209 GNAI1P63096 354 aa14.17□□□□□ -0.14
COL11A1-207ENST00000465209 CCDC152Q4G0S7 254 aa14.17□□□□□ -0.14
COL11A1-207ENST00000465209 RSBN1LQ6PCB5 846 aaPredicted RBP14.17□□□□□ -0.14
COL11A1-207ENST00000465209 DCPSQ96C86 337 aaKnown RBP14.17□□□□□ -0.14
COL11A1-207ENST00000465209 METTL22Q9BUU2 404 aaPredicted RBP14.17□□□□□ -0.14
COL11A1-207ENST00000465209 ZC3H12CQ9C0D7 883 aaKnown RBP14.17□□□□□ -0.14
COL11A1-207ENST00000465209 SAGE1Q9NXZ1 904 aa14.17□□□□□ -0.14
COL11A1-207ENST00000465209 GGA1Q9UJY5 639 aa14.17□□□□□ -0.14
COL11A1-207ENST00000465209 WTIPA6NIX2 430 aaPredicted RBP14.16□□□□□ -0.14
COL11A1-207ENST00000465209 ELL2O00472 640 aaPredicted RBP14.16□□□□□ -0.14
COL11A1-207ENST00000465209 IGKV5-2P06315 115 aa14.16□□□□□ -0.14
COL11A1-207ENST00000465209 RBM26Q5T8P6 1007 aaKnown RBP14.16□□□□□ -0.14
COL11A1-207ENST00000465209 TSPYL6Q8N831 410 aa14.16□□□□□ -0.14
COL11A1-207ENST00000465209 AGBL3Q8NEM8 1001 aa14.16□□□□□ -0.14
COL11A1-207ENST00000465209 JARID2Q92833 1246 aaPredicted RBP14.16□□□□□ -0.14
COL11A1-207ENST00000465209 CDCA5Q96FF9 252 aa14.16□□□□□ -0.14
COL11A1-207ENST00000465209 CWC25Q9NXE8 425 aaPredicted RBP14.16□□□□□ -0.14
COL11A1-207ENST00000465209 HTTP42858 3142 aa14.16□□□□□ -0.14
COL11A1-207ENST00000465209 XDHP47989 1333 aa14.15□□□□□ -0.14
COL11A1-207ENST00000465209 MED23Q9ULK4 1368 aa14.15□□□□□ -0.14
COL11A1-207ENST00000465209 SLC34A2O95436 690 aa14.15□□□□□ -0.14
COL11A1-207ENST00000465209 KIF23Q02241 960 aaPredicted RBP14.15□□□□□ -0.14
COL11A1-207ENST00000465209 C2orf69Q8N8R5 385 aa14.15□□□□□ -0.14
COL11A1-207ENST00000465209 CCDC85AQ96PX6 553 aaPredicted RBP14.15□□□□□ -0.14
COL11A1-207ENST00000465209 ANKIB1Q9P2G1 1089 aa14.15□□□□□ -0.14
COL11A1-207ENST00000465209 PITPNM2Q9BZ72 1349 aa14.15□□□□□ -0.15
COL11A1-207ENST00000465209 HSP90B1P14625 803 aaKnown RBP14.14□□□□□ -0.15
COL11A1-207ENST00000465209 CTSWP56202 376 aa14.14□□□□□ -0.15
COL11A1-207ENST00000465209 MLLT1Q03111 559 aaPredicted RBP14.14□□□□□ -0.15
COL11A1-207ENST00000465209 DGKZQ13574 1117 aa14.14□□□□□ -0.15
COL11A1-207ENST00000465209 ANGEL2Q5VTE6 544 aaKnown RBP14.14□□□□□ -0.15
COL11A1-207ENST00000465209 RASAL3Q86YV0 1011 aa14.14□□□□□ -0.15
COL11A1-207ENST00000465209 SULF1Q8IWU6 871 aa14.14□□□□□ -0.15
COL11A1-207ENST00000465209 CCDC102AQ96A19 550 aa14.14□□□□□ -0.15
COL11A1-207ENST00000465209 LAMB1P07942 1786 aa14.14□□□□□ -0.15
COL11A1-207ENST00000465209 CACNA1FO60840 1977 aa14.13□□□□□ -0.15
COL11A1-207ENST00000465209 ZNF157P51786 506 aaPredicted RBP14.13□□□□□ -0.15
COL11A1-207ENST00000465209 CALD1Q05682 793 aaKnown RBP14.13□□□□□ -0.15
COL11A1-207ENST00000465209 SCARF1Q14162 830 aa14.13□□□□□ -0.15
COL11A1-207ENST00000465209 PODNQ7Z5L7 613 aa14.13□□□□□ -0.15
COL11A1-207ENST00000465209 ANKRD18AQ8IVF6 992 aa14.13□□□□□ -0.15
COL11A1-207ENST00000465209 TTLL11Q8NHH1 800 aa14.13□□□□□ -0.15
COL11A1-207ENST00000465209 CSRNP1Q96S65 589 aa14.13□□□□□ -0.15
COL11A1-207ENST00000465209 MYOZ2Q9NPC6 264 aa14.13□□□□□ -0.15
COL11A1-207ENST00000465209 RNF186Q9NXI6 227 aa14.13□□□□□ -0.15
COL11A1-207ENST00000465209 MAP3K2Q9Y2U5 619 aa14.13□□□□□ -0.15
COL11A1-207ENST00000465209 BRCA2P51587 3418 aa14.13□□□□□ -0.15
COL11A1-207ENST00000465209 CENPFP49454 3210 aa14.12□□□□□ -0.15
COL11A1-207ENST00000465209 PDE4DIPQ5VU43 2346 aa14.12□□□□□ -0.15
COL11A1-207ENST00000465209 PI4KAP2A4QPH2 592 aa14.12□□□□□ -0.15
COL11A1-207ENST00000465209 ATP2B4P23634 1241 aa14.12□□□□□ -0.15
COL11A1-207ENST00000465209 CCDC30Q5VVM6 783 aa14.12□□□□□ -0.15
COL11A1-207ENST00000465209 PI4KAP1Q8N8J0 262 aa14.12□□□□□ -0.15
COL11A1-207ENST00000465209 GREM2Q9H772 168 aa14.12□□□□□ -0.15
COL11A1-207ENST00000465209 BSDC1Q9NW68 430 aaPredicted RBP14.12□□□□□ -0.15
COL11A1-207ENST00000465209 MINPP1Q9UNW1 487 aa14.12□□□□□ -0.15
COL11A1-207ENST00000465209 MKI67P46013 3256 aaKnown RBP14.12□□□□□ -0.15
COL11A1-207ENST00000465209 ECM29Q5VYK3 1845 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms