RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 LINS1Q8NG48 757 aa33■■■□□ 2.87
U2AF1-206ENST00000464750 CDC5LQ99459 802 aaKnown RBP33■■■□□ 2.87
U2AF1-206ENST00000464750 GREM2Q9H772 168 aa33■■■□□ 2.87
U2AF1-206ENST00000464750 RTL9Q8NET4 1388 aa32.99■■■□□ 2.87
U2AF1-206ENST00000464750 GGA1Q9UJY5 639 aa32.99■■■□□ 2.87
U2AF1-206ENST00000464750 SCN9AQ15858 1988 aa32.98■■■□□ 2.87
U2AF1-206ENST00000464750 ECE2O60344 883 aa32.98■■■□□ 2.87
U2AF1-206ENST00000464750 TMEM88BA6NKF7 163 aa32.97■■■□□ 2.87
U2AF1-206ENST00000464750 DOK7Q18PE1 504 aa32.97■■■□□ 2.87
U2AF1-206ENST00000464750 MKRN1Q9UHC7 482 aaKnown RBP32.97■■■□□ 2.87
U2AF1-206ENST00000464750 CASP7P55210 303 aa32.96■■■□□ 2.87
U2AF1-206ENST00000464750 PLA2G12BQ9BX93 195 aa32.96■■■□□ 2.87
U2AF1-206ENST00000464750 ZC3H12CQ9C0D7 883 aaKnown RBP32.96■■■□□ 2.87
U2AF1-206ENST00000464750 XDHP47989 1333 aa32.96■■■□□ 2.87
U2AF1-206ENST00000464750 TRPM7Q96QT4 1865 aa32.95■■■□□ 2.87
U2AF1-206ENST00000464750 F6X3S4 739 aa32.95■■■□□ 2.87
U2AF1-206ENST00000464750 PSMD14O00487 310 aa32.95■■■□□ 2.87
U2AF1-206ENST00000464750 PCNTO95613 3336 aa32.94■■■□□ 2.86
U2AF1-206ENST00000464750 PSME4Q14997 1843 aa32.93■■■□□ 2.86
U2AF1-206ENST00000464750 ZBTB12Q9Y330 459 aaPredicted RBP32.93■■■□□ 2.86
U2AF1-206ENST00000464750 CNTNAP1P78357 1384 aa32.93■■■□□ 2.86
U2AF1-206ENST00000464750 BSDC1Q9NW68 430 aaPredicted RBP32.92■■■□□ 2.86
U2AF1-206ENST00000464750 SHTN1A0MZ66 631 aa32.91■■■□□ 2.86
U2AF1-206ENST00000464750 FAM161AQ3B820 660 aa32.91■■■□□ 2.86
U2AF1-206ENST00000464750 BEND3Q5T5X7 828 aa32.91■■■□□ 2.86
U2AF1-206ENST00000464750 KCNQ5Q9NR82 932 aa32.91■■■□□ 2.86
U2AF1-206ENST00000464750 CNOT7Q9UIV1 285 aaKnown RBP32.91■■■□□ 2.86
U2AF1-206ENST00000464750 G3V3G9 751 aa32.9■■■□□ 2.86
U2AF1-206ENST00000464750 ATP2B4P23634 1241 aa32.9■■■□□ 2.86
U2AF1-206ENST00000464750 DCAF8Q5TAQ9 597 aa32.9■■■□□ 2.86
U2AF1-206ENST00000464750 MICALL2Q8IY33 904 aa32.9■■■□□ 2.86
U2AF1-206ENST00000464750 TRPM4Q8TD43 1214 aa32.9■■■□□ 2.86
U2AF1-206ENST00000464750 DPF2Q92785 391 aa32.89■■■□□ 2.86
U2AF1-206ENST00000464750 MINPP1Q9UNW1 487 aa32.89■■■□□ 2.86
U2AF1-206ENST00000464750 H7C1D1 291 aa32.88■■■□□ 2.85
U2AF1-206ENST00000464750 ITGA6P23229 1130 aa32.88■■■□□ 2.85
U2AF1-206ENST00000464750 IGHMBP2P38935 993 aaKnown RBP32.88■■■□□ 2.85
U2AF1-206ENST00000464750 FMR1Q06787 632 aaKnown RBP eCLIP32.88■■■□□ 2.85
U2AF1-206ENST00000464750 E9PSI1 815 aa32.87■■■□□ 2.85
U2AF1-206ENST00000464750 CSF1RP07333 972 aa32.87■■■□□ 2.85
U2AF1-206ENST00000464750 RPS12P25398 132 aaKnown RBP32.87■■■□□ 2.85
U2AF1-206ENST00000464750 TRAF5O00463 557 aa32.86■■■□□ 2.85
U2AF1-206ENST00000464750 HIRAP54198 1017 aaPredicted RBP32.86■■■□□ 2.85
U2AF1-206ENST00000464750 MED23Q9ULK4 1368 aa32.84■■■□□ 2.85
U2AF1-206ENST00000464750 A0A1B0GUL6 1792 aa32.84■■■□□ 2.85
U2AF1-206ENST00000464750 HSPA1AP0DMV8 641 aaKnown RBP32.84■■■□□ 2.85
U2AF1-206ENST00000464750 HSPA1BP0DMV9 641 aaKnown RBP32.84■■■□□ 2.85
U2AF1-206ENST00000464750 ZC3H15Q8WU90 426 aaKnown RBP32.84■■■□□ 2.85
U2AF1-206ENST00000464750 PGAP2Q9UHJ9 254 aa32.84■■■□□ 2.85
U2AF1-206ENST00000464750 CCT4P50991 539 aaKnown RBP32.83■■■□□ 2.85
U2AF1-206ENST00000464750 SLC4A10Q6U841 1118 aa32.83■■■□□ 2.85
U2AF1-206ENST00000464750 ABT1Q9ULW3 272 aaKnown RBP32.83■■■□□ 2.85
U2AF1-206ENST00000464750 WTIPA6NIX2 430 aaPredicted RBP32.82■■■□□ 2.84
U2AF1-206ENST00000464750 CCER2I3L3R5 266 aa32.82■■■□□ 2.84
U2AF1-206ENST00000464750 GRM8O00222 908 aa32.82■■■□□ 2.84
U2AF1-206ENST00000464750 VIL1P09327 827 aaKnown RBP32.82■■■□□ 2.84
U2AF1-206ENST00000464750 SAMD7Q7Z3H4 446 aa32.82■■■□□ 2.84
U2AF1-206ENST00000464750 MPHOSPH8Q99549 860 aa32.82■■■□□ 2.84
U2AF1-206ENST00000464750 GLIS2Q9BZE0 524 aaPredicted RBP32.82■■■□□ 2.84
U2AF1-206ENST00000464750 RASSF10A6NK89 507 aa32.81■■■□□ 2.84
U2AF1-206ENST00000464750 ZNF609O15014 1411 aa32.81■■■□□ 2.84
U2AF1-206ENST00000464750 FOXO4P98177 505 aa32.81■■■□□ 2.84
U2AF1-206ENST00000464750 SLFN5Q08AF3 891 aa32.81■■■□□ 2.84
U2AF1-206ENST00000464750 ANKRD18BA2A2Z9 1011 aa32.8■■■□□ 2.84
U2AF1-206ENST00000464750 ALDH1L1O75891 902 aa32.8■■■□□ 2.84
U2AF1-206ENST00000464750 VEGFBP49765 207 aa32.8■■■□□ 2.84
U2AF1-206ENST00000464750 TBC1D10BQ4KMP7 808 aaPredicted RBP32.8■■■□□ 2.84
U2AF1-206ENST00000464750 CHMP3Q9Y3E7 222 aa32.8■■■□□ 2.84
U2AF1-206ENST00000464750 ZNF646O15015 1829 aaPredicted RBP32.79■■■□□ 2.84
U2AF1-206ENST00000464750 MRPL50Q8N5N7 158 aaKnown RBP32.79■■■□□ 2.84
U2AF1-206ENST00000464750 SRCIN1Q9C0H9 1055 aa32.79■■■□□ 2.84
U2AF1-206ENST00000464750 EGFRP00533 1210 aa32.78■■■□□ 2.84
U2AF1-206ENST00000464750 DEFB115Q30KQ5 88 aa32.78■■■□□ 2.84
U2AF1-206ENST00000464750 PODNQ7Z5L7 613 aa32.78■■■□□ 2.84
U2AF1-206ENST00000464750 ANKRD2Q9GZV1 360 aa32.78■■■□□ 2.84
U2AF1-206ENST00000464750 C9orf78Q9NZ63 289 aaPredicted RBP32.78■■■□□ 2.84
U2AF1-206ENST00000464750 LEMD3Q9Y2U8 911 aa32.78■■■□□ 2.84
U2AF1-206ENST00000464750 POLR2AP24928 1970 aaKnown RBP32.78■■■□□ 2.84
U2AF1-206ENST00000464750 CST9Q5W186 159 aa32.77■■■□□ 2.84
U2AF1-206ENST00000464750 RSBN1LQ6PCB5 846 aaPredicted RBP32.77■■■□□ 2.84
U2AF1-206ENST00000464750 IFIT5Q13325 482 aaKnown RBP32.76■■■□□ 2.83
U2AF1-206ENST00000464750 EPHA10Q5JZY3 1008 aa32.76■■■□□ 2.83
U2AF1-206ENST00000464750 RBM26Q5T8P6 1007 aaKnown RBP32.76■■■□□ 2.83
U2AF1-206ENST00000464750 CDC37L1Q7L3B6 337 aa32.76■■■□□ 2.83
U2AF1-206ENST00000464750 CDCA7LQ96GN5 454 aa32.76■■■□□ 2.83
U2AF1-206ENST00000464750 KIF4BQ2VIQ3 1234 aa32.75■■■□□ 2.83
U2AF1-206ENST00000464750 LMBR1LQ6UX01 489 aa32.75■■■□□ 2.83
U2AF1-206ENST00000464750 AGBL3Q8NEM8 1001 aa32.75■■■□□ 2.83
U2AF1-206ENST00000464750 ZNF804BA4D1E1 1349 aa32.75■■■□□ 2.83
U2AF1-206ENST00000464750 USP17L3A6NCW0 530 aa32.74■■■□□ 2.83
U2AF1-206ENST00000464750 USP17L4A6NCW7 530 aa32.74■■■□□ 2.83
U2AF1-206ENST00000464750 CELF2O95319 508 aaKnown RBP32.74■■■□□ 2.83
U2AF1-206ENST00000464750 CHRNDQ07001 517 aa32.74■■■□□ 2.83
U2AF1-206ENST00000464750 USP17L1Q7RTZ2 530 aa32.74■■■□□ 2.83
U2AF1-206ENST00000464750 SSH1Q8WYL5 1049 aa32.74■■■□□ 2.83
U2AF1-206ENST00000464750 IFFO2Q5TF58 517 aa32.73■■■□□ 2.83
U2AF1-206ENST00000464750 TXNRD3Q86VQ6 643 aa32.73■■■□□ 2.83
U2AF1-206ENST00000464750 PTPRCP08575 1304 aa32.73■■■□□ 2.83
U2AF1-206ENST00000464750 KLRK1P26718 216 aa32.72■■■□□ 2.83
U2AF1-206ENST00000464750 KCNJ4P48050 445 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms