RNA–Protein interactions for RNA: ENST00000464605.1

UBA3-206, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 431 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-206	ENST00000464605	YDJC	A8MPS7	323 aa		28.08	■■■□□ 2.09
UBA3-206	ENST00000464605	C6orf229	H3BNL8	230 aa		28.08	■■■□□ 2.09
UBA3-206	ENST00000464605	ITGA6	P23229	1130 aa		28.08	■■■□□ 2.09
UBA3-206	ENST00000464605	BRPF1	P55201	1214 aa	Predicted RBP	28.08	■■■□□ 2.09
UBA3-206	ENST00000464605	HNRNPU	Q00839	825 aa	Known RBP eCLIP	28.08	■■■□□ 2.09
UBA3-206	ENST00000464605	IFFO2	Q5TF58	517 aa		28.08	■■■□□ 2.09
UBA3-206	ENST00000464605	SMC4	Q9NTJ3	1288 aa		28.08	■■■□□ 2.09
UBA3-206	ENST00000464605	GJA3	Q9Y6H8	435 aa		28.08	■■■□□ 2.09
UBA3-206	ENST00000464605	ADAMTSL1	Q8N6G6	1762 aa		28.08	■■■□□ 2.09
UBA3-206	ENST00000464605	MINPP1	Q9UNW1	487 aa		28.07	■■■□□ 2.08
UBA3-206	ENST00000464605	UTY	O14607	1347 aa		28.07	■■■□□ 2.08
UBA3-206	ENST00000464605	RIMBP2	O15034	1052 aa		28.06	■■■□□ 2.08
UBA3-206	ENST00000464605	SCNN1D	P51172	638 aa		28.06	■■■□□ 2.08
UBA3-206	ENST00000464605	KAZALD1	Q96I82	304 aa		28.06	■■■□□ 2.08
UBA3-206	ENST00000464605	C9orf78	Q9NZ63	289 aa	Predicted RBP	28.06	■■■□□ 2.08
UBA3-206	ENST00000464605	ANKIB1	Q9P2G1	1089 aa		28.06	■■■□□ 2.08
UBA3-206	ENST00000464605	HACL1	Q9UJ83	578 aa		28.06	■■■□□ 2.08
UBA3-206	ENST00000464605		A0A1B0GUL6	1792 aa		28.06	■■■□□ 2.08
UBA3-206	ENST00000464605	WTIP	A6NIX2	430 aa	Predicted RBP	28.05	■■■□□ 2.08
UBA3-206	ENST00000464605	NBPF7	P0C2Y1	421 aa	Predicted RBP	28.05	■■■□□ 2.08
UBA3-206	ENST00000464605	RARS	P54136	660 aa	Known RBP	28.05	■■■□□ 2.08
UBA3-206	ENST00000464605	XDH	P47989	1333 aa		28.04	■■■□□ 2.08
UBA3-206	ENST00000464605	UFL1	O94874	794 aa		28.04	■■■□□ 2.08
UBA3-206	ENST00000464605	LDHD	Q86WU2	507 aa		28.04	■■■□□ 2.08
UBA3-206	ENST00000464605	EYA3	Q99504	573 aa		28.04	■■■□□ 2.08
UBA3-206	ENST00000464605	GGA1	Q9UJY5	639 aa		28.04	■■■□□ 2.08
UBA3-206	ENST00000464605	EPHX2	P34913	555 aa		28.03	■■■□□ 2.08
UBA3-206	ENST00000464605	LMBR1L	Q6UX01	489 aa		28.03	■■■□□ 2.08
UBA3-206	ENST00000464605	SUCLG2	Q96I99	432 aa		28.03	■■■□□ 2.08
UBA3-206	ENST00000464605	DBNDD1	Q9H9R9	158 aa		28.03	■■■□□ 2.08
UBA3-206	ENST00000464605	NOB1	Q9ULX3	412 aa	Known RBP	28.03	■■■□□ 2.08
UBA3-206	ENST00000464605	PSME4	Q14997	1843 aa		28.03	■■■□□ 2.08
UBA3-206	ENST00000464605	RAD17	O75943	681 aa		28.02	■■■□□ 2.08
UBA3-206	ENST00000464605	CIAPIN1	Q6FI81	312 aa		28.02	■■■□□ 2.08
UBA3-206	ENST00000464605	ATP2B4	P23634	1241 aa		28.01	■■■□□ 2.07
UBA3-206	ENST00000464605	IGHMBP2	P38935	993 aa	Known RBP	28.01	■■■□□ 2.07
UBA3-206	ENST00000464605	EPS15	P42566	896 aa		28.01	■■■□□ 2.07
UBA3-206	ENST00000464605	DOK7	Q18PE1	504 aa		28.01	■■■□□ 2.07
UBA3-206	ENST00000464605	ANKRD18B	A2A2Z9	1011 aa		28	■■■□□ 2.07
UBA3-206	ENST00000464605	ZC3H12C	Q9C0D7	883 aa	Known RBP	28	■■■□□ 2.07
UBA3-206	ENST00000464605	USP44	Q9H0E7	712 aa		28	■■■□□ 2.07
UBA3-206	ENST00000464605	KCNQ5	Q9NR82	932 aa		28	■■■□□ 2.07
UBA3-206	ENST00000464605	ECE2	O60344	883 aa		27.99	■■■□□ 2.07
UBA3-206	ENST00000464605	PASK	Q96RG2	1323 aa		27.98	■■■□□ 2.07
UBA3-206	ENST00000464605	GMPS	P49915	693 aa	Predicted RBP	27.98	■■■□□ 2.07
UBA3-206	ENST00000464605	IFIT5	Q13325	482 aa	Known RBP	27.98	■■■□□ 2.07
UBA3-206	ENST00000464605	CREBZF	Q9NS37	354 aa		27.98	■■■□□ 2.07
UBA3-206	ENST00000464605	GPRC5D	Q9NZD1	345 aa		27.98	■■■□□ 2.07
UBA3-206	ENST00000464605	CCT4	P50991	539 aa	Known RBP	27.97	■■■□□ 2.07
UBA3-206	ENST00000464605	TNIP1	Q15025	636 aa		27.97	■■■□□ 2.07
UBA3-206	ENST00000464605	EAPP	Q56P03	285 aa	Predicted RBP	27.97	■■■□□ 2.07
UBA3-206	ENST00000464605	MPHOSPH8	Q99549	860 aa		27.97	■■■□□ 2.07
UBA3-206	ENST00000464605	ZNF646	O15015	1829 aa	Predicted RBP	27.97	■■■□□ 2.07
UBA3-206	ENST00000464605	PSMD14	O00487	310 aa		27.96	■■■□□ 2.07
UBA3-206	ENST00000464605	ITGBL1	O95965	494 aa	Predicted RBP	27.96	■■■□□ 2.07
UBA3-206	ENST00000464605	RABL6	Q3YEC7	729 aa	Predicted RBP	27.96	■■■□□ 2.07
UBA3-206	ENST00000464605	PNMA8A	Q86V59	439 aa	Predicted RBP	27.96	■■■□□ 2.07
UBA3-206	ENST00000464605	ZNF594	Q96JF6	807 aa	Predicted RBP	27.96	■■■□□ 2.07
UBA3-206	ENST00000464605	CHMP3	Q9Y3E7	222 aa		27.96	■■■□□ 2.07
UBA3-206	ENST00000464605	ZBED9	Q6R2W3	1325 aa		27.95	■■■□□ 2.07
UBA3-206	ENST00000464605	LMOD1	P29536	600 aa	Predicted RBP	27.95	■■■□□ 2.06
UBA3-206	ENST00000464605	ANKRD44	Q8N8A2	993 aa		27.95	■■■□□ 2.06
UBA3-206	ENST00000464605	CHRND	Q07001	517 aa		27.94	■■■□□ 2.06
UBA3-206	ENST00000464605	API5	Q9BZZ5	524 aa	Known RBP	27.94	■■■□□ 2.06
UBA3-206	ENST00000464605	ANKRD2	Q9GZV1	360 aa		27.94	■■■□□ 2.06
UBA3-206	ENST00000464605	BICC1	Q9H694	974 aa	Known RBP	27.94	■■■□□ 2.06
UBA3-206	ENST00000464605	LEMD3	Q9Y2U8	911 aa		27.94	■■■□□ 2.06
UBA3-206	ENST00000464605	MED23	Q9ULK4	1368 aa		27.94	■■■□□ 2.06
UBA3-206	ENST00000464605	CCDC57	Q2TAC2	916 aa		27.93	■■■□□ 2.06
UBA3-206	ENST00000464605	TXNRD3	Q86VQ6	643 aa		27.93	■■■□□ 2.06
UBA3-206	ENST00000464605	ARHGAP45	Q92619	1136 aa		27.93	■■■□□ 2.06
UBA3-206	ENST00000464605	ZBTB12	Q9Y330	459 aa	Predicted RBP	27.93	■■■□□ 2.06
UBA3-206	ENST00000464605	POLR2A	P24928	1970 aa	Known RBP	27.92	■■■□□ 2.06
UBA3-206	ENST00000464605	BCAR3	O75815	825 aa		27.92	■■■□□ 2.06
UBA3-206	ENST00000464605	SHTN1	A0MZ66	631 aa		27.91	■■■□□ 2.06
UBA3-206	ENST00000464605	USP50	Q70EL3	339 aa	Predicted RBP	27.91	■■■□□ 2.06
UBA3-206	ENST00000464605	ADARB2	Q9NS39	739 aa	Known RBP	27.91	■■■□□ 2.06
UBA3-206	ENST00000464605	CLEC11A	Q9Y240	323 aa		27.91	■■■□□ 2.06
UBA3-206	ENST00000464605	ZNF804B	A4D1E1	1349 aa		27.91	■■■□□ 2.06
UBA3-206	ENST00000464605	KIF16B	Q96L93	1317 aa		27.91	■■■□□ 2.06
UBA3-206	ENST00000464605	IRS2	Q9Y4H2	1338 aa		27.91	■■■□□ 2.06
UBA3-206	ENST00000464605	PCNT	O95613	3336 aa		27.9	■■■□□ 2.06
UBA3-206	ENST00000464605	SNAP23	O00161	211 aa		27.9	■■■□□ 2.06
UBA3-206	ENST00000464605	VIL1	P09327	827 aa	Known RBP	27.9	■■■□□ 2.06
UBA3-206	ENST00000464605	KLRK1	P26718	216 aa		27.9	■■■□□ 2.06
UBA3-206	ENST00000464605	DPF2	Q92785	391 aa		27.9	■■■□□ 2.06
UBA3-206	ENST00000464605	TAF5L	O75529	589 aa		27.89	■■■□□ 2.06
UBA3-206	ENST00000464605	MAP1S	Q66K74	1059 aa	Predicted RBP	27.89	■■■□□ 2.06
UBA3-206	ENST00000464605	HELB	Q8NG08	1087 aa	Predicted RBP	27.89	■■■□□ 2.06
UBA3-206	ENST00000464605	CNOT7	Q9UIV1	285 aa	Known RBP	27.89	■■■□□ 2.06
UBA3-206	ENST00000464605	LDHAL6A	Q6ZMR3	332 aa		27.88	■■■□□ 2.05
UBA3-206	ENST00000464605	PODN	Q7Z5L7	613 aa		27.88	■■■□□ 2.05
UBA3-206	ENST00000464605	CNTROB	Q8N137	903 aa		27.88	■■■□□ 2.05
UBA3-206	ENST00000464605	PUS3	Q9BZE2	481 aa	Known RBP	27.88	■■■□□ 2.05
UBA3-206	ENST00000464605	MKRN1	Q9UHC7	482 aa	Known RBP	27.88	■■■□□ 2.05
UBA3-206	ENST00000464605		G3V3G9	751 aa		27.87	■■■□□ 2.05
UBA3-206	ENST00000464605	HIRA	P54198	1017 aa	Predicted RBP	27.87	■■■□□ 2.05
UBA3-206	ENST00000464605	DCAF8	Q5TAQ9	597 aa		27.87	■■■□□ 2.05
UBA3-206	ENST00000464605	INTS3	Q68E01	1043 aa	Known RBP	27.87	■■■□□ 2.05
UBA3-206	ENST00000464605	TNN	Q9UQP3	1299 aa		27.87	■■■□□ 2.05

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