RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 KSR2Q6VAB6 950 aa18.68■□□□□ 0.58
ALMS1-202ENST00000464408 SAMD7Q7Z3H4 446 aa18.68■□□□□ 0.58
ALMS1-202ENST00000464408 MRS2Q9HD23 443 aa18.68■□□□□ 0.58
ALMS1-202ENST00000464408 WBP1LQ9NX94 342 aa18.68■□□□□ 0.58
ALMS1-202ENST00000464408 PGAP2Q9UHJ9 254 aa18.68■□□□□ 0.58
ALMS1-202ENST00000464408 GRM1Q13255 1194 aa18.67■□□□□ 0.58
ALMS1-202ENST00000464408 TWISTNBQ3B726 338 aaPredicted RBP18.67■□□□□ 0.58
ALMS1-202ENST00000464408 CCDC152Q4G0S7 254 aa18.67■□□□□ 0.58
ALMS1-202ENST00000464408 PAXIP1Q6ZW49 1069 aaPredicted RBP18.67■□□□□ 0.58
ALMS1-202ENST00000464408 PODXL2Q9NZ53 605 aa18.67■□□□□ 0.58
ALMS1-202ENST00000464408 SALL2Q9Y467 1007 aaPredicted RBP18.67■□□□□ 0.58
ALMS1-202ENST00000464408 TLL2Q9Y6L7 1015 aa18.67■□□□□ 0.58
ALMS1-202ENST00000464408 PSME4Q14997 1843 aa18.67■□□□□ 0.58
ALMS1-202ENST00000464408 WTIPA6NIX2 430 aaPredicted RBP18.66■□□□□ 0.58
ALMS1-202ENST00000464408 UFL1O94874 794 aa18.66■□□□□ 0.58
ALMS1-202ENST00000464408 CELF2O95319 508 aaKnown RBP18.66■□□□□ 0.58
ALMS1-202ENST00000464408 AIDAQ96BJ3 306 aa18.66■□□□□ 0.58
ALMS1-202ENST00000464408 CAPNS2Q96L46 248 aa18.66■□□□□ 0.58
ALMS1-202ENST00000464408 ANKIB1Q9P2G1 1089 aa18.66■□□□□ 0.58
ALMS1-202ENST00000464408 H7C1D1 291 aa18.65■□□□□ 0.58
ALMS1-202ENST00000464408 CTSWP56202 376 aa18.65■□□□□ 0.58
ALMS1-202ENST00000464408 TBC1D10BQ4KMP7 808 aaPredicted RBP18.65■□□□□ 0.58
ALMS1-202ENST00000464408 EYA3Q99504 573 aa18.65■□□□□ 0.58
ALMS1-202ENST00000464408 STK31Q9BXU1 1019 aa18.65■□□□□ 0.58
ALMS1-202ENST00000464408 FANCIQ9NVI1 1328 aa18.65■□□□□ 0.58
ALMS1-202ENST00000464408 NEURL1BA8MQ27 555 aa18.64■□□□□ 0.57
ALMS1-202ENST00000464408 AOC2O75106 756 aa18.64■□□□□ 0.57
ALMS1-202ENST00000464408 SLC4A2P04920 1241 aa18.64■□□□□ 0.57
ALMS1-202ENST00000464408 CTCFP49711 727 aaPredicted RBP18.64■□□□□ 0.57
ALMS1-202ENST00000464408 LBX1P52954 281 aa18.64■□□□□ 0.57
ALMS1-202ENST00000464408 ZC3H15Q8WU90 426 aaKnown RBP18.64■□□□□ 0.57
ALMS1-202ENST00000464408 DPF2Q92785 391 aa18.64■□□□□ 0.57
ALMS1-202ENST00000464408 ZNF408Q9H9D4 720 aa18.64■□□□□ 0.57
ALMS1-202ENST00000464408 GGA1Q9UJY5 639 aa18.64■□□□□ 0.57
ALMS1-202ENST00000464408 IL16Q14005 1332 aa18.64■□□□□ 0.57
ALMS1-202ENST00000464408 CACNA1FO60840 1977 aa18.63■□□□□ 0.57
ALMS1-202ENST00000464408 HSP90B1P14625 803 aaKnown RBP18.63■□□□□ 0.57
ALMS1-202ENST00000464408 RBM26Q5T8P6 1007 aaKnown RBP18.63■□□□□ 0.57
ALMS1-202ENST00000464408 SAPCD2Q86UD0 394 aa18.63■□□□□ 0.57
ALMS1-202ENST00000464408 USP48Q86UV5 1035 aa18.63■□□□□ 0.57
ALMS1-202ENST00000464408 ANKRD18AQ8IVF6 992 aa18.63■□□□□ 0.57
ALMS1-202ENST00000464408 TTLL11Q8NHH1 800 aa18.63■□□□□ 0.57
ALMS1-202ENST00000464408 ZC3H12CQ9C0D7 883 aaKnown RBP18.63■□□□□ 0.57
ALMS1-202ENST00000464408 GREM2Q9H772 168 aa18.63■□□□□ 0.57
ALMS1-202ENST00000464408 ZNF646O15015 1829 aaPredicted RBP18.63■□□□□ 0.57
ALMS1-202ENST00000464408 ZNF316A6NFI3 1004 aaPredicted RBP18.62■□□□□ 0.57
ALMS1-202ENST00000464408 HSPA8P11142 646 aaKnown RBP18.62■□□□□ 0.57
ALMS1-202ENST00000464408 UBE3BQ7Z3V4 1068 aa18.62■□□□□ 0.57
ALMS1-202ENST00000464408 CHMP4AQ9BY43 222 aa18.62■□□□□ 0.57
ALMS1-202ENST00000464408 ASTN2O75129 1339 aaPredicted RBP18.62■□□□□ 0.57
ALMS1-202ENST00000464408 XDHP47989 1333 aa18.61■□□□□ 0.57
ALMS1-202ENST00000464408 RPS12P25398 132 aaKnown RBP18.61■□□□□ 0.57
ALMS1-202ENST00000464408 NEXNQ0ZGT2 675 aa18.61■□□□□ 0.57
ALMS1-202ENST00000464408 FLIIQ13045 1269 aa18.61■□□□□ 0.57
ALMS1-202ENST00000464408 CDC37L1Q7L3B6 337 aa18.61■□□□□ 0.57
ALMS1-202ENST00000464408 SPINK5Q9NQ38 1064 aaPredicted RBP18.61■□□□□ 0.57
ALMS1-202ENST00000464408 PRDM10Q9NQV6 1147 aa18.61■□□□□ 0.57
ALMS1-202ENST00000464408 ADM5C9JUS6 153 aa18.6■□□□□ 0.57
ALMS1-202ENST00000464408 H7C1W4 665 aa18.6■□□□□ 0.57
ALMS1-202ENST00000464408 ANP32CO43423 234 aa18.6■□□□□ 0.57
ALMS1-202ENST00000464408 VIL1P09327 827 aaKnown RBP18.6■□□□□ 0.57
ALMS1-202ENST00000464408 MAP2K1Q02750 393 aaPredicted RBP18.6■□□□□ 0.57
ALMS1-202ENST00000464408 VAMP4O75379 141 aa18.59■□□□□ 0.57
ALMS1-202ENST00000464408 ECE1P42892 770 aa18.59■□□□□ 0.57
ALMS1-202ENST00000464408 EXOSC9Q06265 439 aaKnown RBP18.59■□□□□ 0.57
ALMS1-202ENST00000464408 MINPP1Q9UNW1 487 aa18.59■□□□□ 0.57
ALMS1-202ENST00000464408 G3V3G9 751 aa18.58■□□□□ 0.56
ALMS1-202ENST00000464408 ZEB1P37275 1124 aaPredicted RBP18.58■□□□□ 0.56
ALMS1-202ENST00000464408 CASP7P55210 303 aa18.58■□□□□ 0.56
ALMS1-202ENST00000464408 FKBP5Q13451 457 aaPredicted RBP18.58■□□□□ 0.56
ALMS1-202ENST00000464408 GCKRQ14397 625 aa18.58■□□□□ 0.56
ALMS1-202ENST00000464408 KIF4BQ2VIQ3 1234 aa18.58■□□□□ 0.56
ALMS1-202ENST00000464408 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
ALMS1-202ENST00000464408 DCAF8Q5TAQ9 597 aa18.58■□□□□ 0.56
ALMS1-202ENST00000464408 KRT26Q7Z3Y9 468 aa18.58■□□□□ 0.56
ALMS1-202ENST00000464408 CDC5LQ99459 802 aaKnown RBP18.58■□□□□ 0.56
ALMS1-202ENST00000464408 TSKSQ9UJT2 592 aa18.58■□□□□ 0.56
ALMS1-202ENST00000464408 ATP2B4P23634 1241 aa18.57■□□□□ 0.56
ALMS1-202ENST00000464408 RSBN1LQ6PCB5 846 aaPredicted RBP18.57■□□□□ 0.56
ALMS1-202ENST00000464408 ZIC5Q96T25 663 aa18.57■□□□□ 0.56
ALMS1-202ENST00000464408 BSDC1Q9NW68 430 aaPredicted RBP18.57■□□□□ 0.56
ALMS1-202ENST00000464408 A0A1B0GUL6 1792 aa18.56■□□□□ 0.56
ALMS1-202ENST00000464408 FAM161AQ3B820 660 aa18.56■□□□□ 0.56
ALMS1-202ENST00000464408 WDR63Q8IWG1 891 aa18.56■□□□□ 0.56
ALMS1-202ENST00000464408 DNAAF4Q8WXU2 420 aa18.56■□□□□ 0.56
ALMS1-202ENST00000464408 GMLQ99445 158 aa18.56■□□□□ 0.56
ALMS1-202ENST00000464408 MXD3Q9BW11 206 aa18.56■□□□□ 0.56
ALMS1-202ENST00000464408 GGA3Q9NZ52 723 aa18.56■□□□□ 0.56
ALMS1-202ENST00000464408 ZNF609O15014 1411 aa18.56■□□□□ 0.56
ALMS1-202ENST00000464408 F6X3S4 739 aa18.55■□□□□ 0.56
ALMS1-202ENST00000464408 KLRK1P26718 216 aa18.55■□□□□ 0.56
ALMS1-202ENST00000464408 TXNRD3Q86VQ6 643 aa18.55■□□□□ 0.56
ALMS1-202ENST00000464408 PLA2G12BQ9BX93 195 aa18.55■□□□□ 0.56
ALMS1-202ENST00000464408 MED23Q9ULK4 1368 aa18.55■□□□□ 0.56
ALMS1-202ENST00000464408 ITGA6P23229 1130 aa18.54■□□□□ 0.56
ALMS1-202ENST00000464408 CCT4P50991 539 aaKnown RBP18.54■□□□□ 0.56
ALMS1-202ENST00000464408 HUNKP57058 714 aa18.54■□□□□ 0.56
ALMS1-202ENST00000464408 ZNF280AP59817 542 aaPredicted RBP18.54■□□□□ 0.56
ALMS1-202ENST00000464408 FAM9BQ8IZU0 186 aa18.54■□□□□ 0.56
ALMS1-202ENST00000464408 DCPSQ96C86 337 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms