RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 MYH16Q9H6N6 1097 aa26.28■■□□□ 1.8
PDLIM4-205ENST00000463615 LINS1Q8NG48 757 aa26.27■■□□□ 1.8
PDLIM4-205ENST00000463615 DBNDD1Q9H9R9 158 aa26.27■■□□□ 1.8
PDLIM4-205ENST00000463615 GGA1Q9UJY5 639 aa26.27■■□□□ 1.8
PDLIM4-205ENST00000463615 ZNF521Q96K83 1311 aa26.27■■□□□ 1.8
PDLIM4-205ENST00000463615 MYH3P11055 1940 aa26.26■■□□□ 1.79
PDLIM4-205ENST00000463615 XDHP47989 1333 aa26.26■■□□□ 1.79
PDLIM4-205ENST00000463615 PSMD14O00487 310 aa26.26■■□□□ 1.79
PDLIM4-205ENST00000463615 RIMBP2O15034 1052 aa26.26■■□□□ 1.79
PDLIM4-205ENST00000463615 ECE2O60344 883 aa26.26■■□□□ 1.79
PDLIM4-205ENST00000463615 RPS12P25398 132 aaKnown RBP26.26■■□□□ 1.79
PDLIM4-205ENST00000463615 CASP7P55210 303 aa26.26■■□□□ 1.79
PDLIM4-205ENST00000463615 FKBP5Q13451 457 aaPredicted RBP26.26■■□□□ 1.79
PDLIM4-205ENST00000463615 ZC3H12CQ9C0D7 883 aaKnown RBP26.26■■□□□ 1.79
PDLIM4-205ENST00000463615 ANKIB1Q9P2G1 1089 aa26.26■■□□□ 1.79
PDLIM4-205ENST00000463615 CNOT7Q9UIV1 285 aaKnown RBP26.26■■□□□ 1.79
PDLIM4-205ENST00000463615 HSPA1AP0DMV8 641 aaKnown RBP26.25■■□□□ 1.79
PDLIM4-205ENST00000463615 HSPA1BP0DMV9 641 aaKnown RBP26.25■■□□□ 1.79
PDLIM4-205ENST00000463615 CCDC85AQ96PX6 553 aaPredicted RBP26.25■■□□□ 1.79
PDLIM4-205ENST00000463615 BSDC1Q9NW68 430 aaPredicted RBP26.25■■□□□ 1.79
PDLIM4-205ENST00000463615 ZNF609O15014 1411 aa26.24■■□□□ 1.79
PDLIM4-205ENST00000463615 UFL1O94874 794 aa26.24■■□□□ 1.79
PDLIM4-205ENST00000463615 HIRAP54198 1017 aaPredicted RBP26.24■■□□□ 1.79
PDLIM4-205ENST00000463615 UBE3BQ7Z3V4 1068 aa26.24■■□□□ 1.79
PDLIM4-205ENST00000463615 GREM2Q9H772 168 aa26.24■■□□□ 1.79
PDLIM4-205ENST00000463615 H7C1D1 291 aa26.23■■□□□ 1.79
PDLIM4-205ENST00000463615 CSF1RP07333 972 aa26.22■■□□□ 1.79
PDLIM4-205ENST00000463615 VIL1P09327 827 aaKnown RBP26.22■■□□□ 1.79
PDLIM4-205ENST00000463615 ATP2B4P23634 1241 aa26.22■■□□□ 1.79
PDLIM4-205ENST00000463615 VEGFBP49765 207 aa26.22■■□□□ 1.79
PDLIM4-205ENST00000463615 DOK7Q18PE1 504 aa26.22■■□□□ 1.79
PDLIM4-205ENST00000463615 MICALL2Q8IY33 904 aa26.22■■□□□ 1.79
PDLIM4-205ENST00000463615 TRPM4Q8TD43 1214 aa26.22■■□□□ 1.79
PDLIM4-205ENST00000463615 GPR101Q96P66 508 aaPredicted RBP26.22■■□□□ 1.79
PDLIM4-205ENST00000463615 DEFB115Q30KQ5 88 aa26.21■■□□□ 1.79
PDLIM4-205ENST00000463615 KCNQ5Q9NR82 932 aa26.21■■□□□ 1.79
PDLIM4-205ENST00000463615 ZBTB12Q9Y330 459 aaPredicted RBP26.21■■□□□ 1.79
PDLIM4-205ENST00000463615 TRPM7Q96QT4 1865 aa26.21■■□□□ 1.79
PDLIM4-205ENST00000463615 CST9Q5W186 159 aa26.2■■□□□ 1.78
PDLIM4-205ENST00000463615 MINPP1Q9UNW1 487 aa26.2■■□□□ 1.78
PDLIM4-205ENST00000463615 SCN9AQ15858 1988 aa26.2■■□□□ 1.78
PDLIM4-205ENST00000463615 SHTN1A0MZ66 631 aa26.19■■□□□ 1.78
PDLIM4-205ENST00000463615 FMR1Q06787 632 aaKnown RBP eCLIP26.19■■□□□ 1.78
PDLIM4-205ENST00000463615 TRAF5O00463 557 aa26.18■■□□□ 1.78
PDLIM4-205ENST00000463615 BEND3Q5T5X7 828 aa26.18■■□□□ 1.78
PDLIM4-205ENST00000463615 MED23Q9ULK4 1368 aa26.18■■□□□ 1.78
PDLIM4-205ENST00000463615 COL13A1Q5TAT6 717 aaPredicted RBP26.17■■□□□ 1.78
PDLIM4-205ENST00000463615 CDC37L1Q7L3B6 337 aa26.17■■□□□ 1.78
PDLIM4-205ENST00000463615 PODNQ7Z5L7 613 aa26.17■■□□□ 1.78
PDLIM4-205ENST00000463615 ABT1Q9ULW3 272 aaKnown RBP26.17■■□□□ 1.78
PDLIM4-205ENST00000463615 PSME4Q14997 1843 aa26.16■■□□□ 1.78
PDLIM4-205ENST00000463615 AGBL3Q8NEM8 1001 aa26.16■■□□□ 1.78
PDLIM4-205ENST00000463615 GLIS2Q9BZE0 524 aaPredicted RBP26.16■■□□□ 1.78
PDLIM4-205ENST00000463615 TLL2Q9Y6L7 1015 aa26.16■■□□□ 1.78
PDLIM4-205ENST00000463615 ITGA6P23229 1130 aa26.15■■□□□ 1.78
PDLIM4-205ENST00000463615 IGHMBP2P38935 993 aaKnown RBP26.15■■□□□ 1.78
PDLIM4-205ENST00000463615 SAMD7Q7Z3H4 446 aa26.15■■□□□ 1.78
PDLIM4-205ENST00000463615 F6X3S4 739 aa26.14■■□□□ 1.78
PDLIM4-205ENST00000463615 G3V3G9 751 aa26.14■■□□□ 1.78
PDLIM4-205ENST00000463615 CCT4P50991 539 aaKnown RBP26.14■■□□□ 1.78
PDLIM4-205ENST00000463615 FAM161AQ3B820 660 aa26.14■■□□□ 1.78
PDLIM4-205ENST00000463615 DCAF8Q5TAQ9 597 aa26.14■■□□□ 1.78
PDLIM4-205ENST00000463615 LEMD3Q9Y2U8 911 aa26.14■■□□□ 1.78
PDLIM4-205ENST00000463615 THSD7BQ9C0I4 1608 aa26.14■■□□□ 1.77
PDLIM4-205ENST00000463615 WDR33Q9C0J8 1336 aaKnown RBP26.14■■□□□ 1.77
PDLIM4-205ENST00000463615 ZNF280AP59817 542 aaPredicted RBP26.13■■□□□ 1.77
PDLIM4-205ENST00000463615 RSBN1LQ6PCB5 846 aaPredicted RBP26.13■■□□□ 1.77
PDLIM4-205ENST00000463615 HHIPL1Q96JK4 782 aa26.13■■□□□ 1.77
PDLIM4-205ENST00000463615 GMLQ99445 158 aa26.13■■□□□ 1.77
PDLIM4-205ENST00000463615 WBP1LQ9NX94 342 aa26.13■■□□□ 1.77
PDLIM4-205ENST00000463615 EGFRP00533 1210 aa26.12■■□□□ 1.77
PDLIM4-205ENST00000463615 FOXO4P98177 505 aa26.12■■□□□ 1.77
PDLIM4-205ENST00000463615 ANKRD2Q9GZV1 360 aa26.12■■□□□ 1.77
PDLIM4-205ENST00000463615 WTIPA6NIX2 430 aaPredicted RBP26.11■■□□□ 1.77
PDLIM4-205ENST00000463615 ALDH1L1O75891 902 aa26.11■■□□□ 1.77
PDLIM4-205ENST00000463615 CELF2O95319 508 aaKnown RBP26.11■■□□□ 1.77
PDLIM4-205ENST00000463615 ECE1P42892 770 aa26.11■■□□□ 1.77
PDLIM4-205ENST00000463615 TBC1D10BQ4KMP7 808 aaPredicted RBP26.11■■□□□ 1.77
PDLIM4-205ENST00000463615 SAPCD2Q86UD0 394 aa26.11■■□□□ 1.77
PDLIM4-205ENST00000463615 SPEF2Q9C093 1822 aa26.11■■□□□ 1.77
PDLIM4-205ENST00000463615 USP17L3A6NCW0 530 aa26.1■■□□□ 1.77
PDLIM4-205ENST00000463615 USP17L4A6NCW7 530 aa26.1■■□□□ 1.77
PDLIM4-205ENST00000463615 USP17L1Q7RTZ2 530 aa26.1■■□□□ 1.77
PDLIM4-205ENST00000463615 MPHOSPH8Q99549 860 aa26.1■■□□□ 1.77
PDLIM4-205ENST00000463615 ANKRD18BA2A2Z9 1011 aa26.09■■□□□ 1.77
PDLIM4-205ENST00000463615 E9PSI1 815 aa26.09■■□□□ 1.77
PDLIM4-205ENST00000463615 KIF4BQ2VIQ3 1234 aa26.09■■□□□ 1.77
PDLIM4-205ENST00000463615 CAPNS2Q96L46 248 aa26.09■■□□□ 1.77
PDLIM4-205ENST00000463615 COA1Q9GZY4 146 aa26.09■■□□□ 1.77
PDLIM4-205ENST00000463615 GRM8O00222 908 aa26.08■■□□□ 1.77
PDLIM4-205ENST00000463615 FOXN1O15353 648 aa26.08■■□□□ 1.77
PDLIM4-205ENST00000463615 MAP2K1Q02750 393 aaPredicted RBP26.08■■□□□ 1.77
PDLIM4-205ENST00000463615 ZNF804BA4D1E1 1349 aa26.08■■□□□ 1.77
PDLIM4-205ENST00000463615 USP48Q86UV5 1035 aa26.07■■□□□ 1.76
PDLIM4-205ENST00000463615 PRDM10Q9NQV6 1147 aa26.07■■□□□ 1.76
PDLIM4-205ENST00000463615 CTCFP49711 727 aaPredicted RBP26.06■■□□□ 1.76
PDLIM4-205ENST00000463615 IFIT5Q13325 482 aaKnown RBP26.06■■□□□ 1.76
PDLIM4-205ENST00000463615 KRT26Q7Z3Y9 468 aa26.06■■□□□ 1.76
PDLIM4-205ENST00000463615 TXNRD3Q86VQ6 643 aa26.06■■□□□ 1.76
PDLIM4-205ENST00000463615 AIDAQ96BJ3 306 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms