RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 TBC1D10BQ4KMP7 808 aaPredicted RBP30.02■■■□□ 2.4
SSNA1-203ENST00000463511 CCDC184Q52MB2 194 aa30.02■■■□□ 2.4
SSNA1-203ENST00000463511 DIEXFQ68CQ4 756 aaKnown RBP30.02■■■□□ 2.4
SSNA1-203ENST00000463511 DLK2Q6UY11 383 aa30.02■■■□□ 2.4
SSNA1-203ENST00000463511 EYA3Q99504 573 aa30.02■■■□□ 2.4
SSNA1-203ENST00000463511 KCNQ5Q9NR82 932 aa30.02■■■□□ 2.4
SSNA1-203ENST00000463511 ELL2O00472 640 aaPredicted RBP30.01■■■□□ 2.39
SSNA1-203ENST00000463511 EGFRP00533 1210 aa30.01■■■□□ 2.39
SSNA1-203ENST00000463511 ZBTB38Q8NAP3 1195 aaPredicted RBP30.01■■■□□ 2.39
SSNA1-203ENST00000463511 TBC1D16Q8TBP0 767 aa30.01■■■□□ 2.39
SSNA1-203ENST00000463511 APAF1O14727 1248 aa30■■■□□ 2.39
SSNA1-203ENST00000463511 MYD88Q99836 296 aa30■■■□□ 2.39
SSNA1-203ENST00000463511 SEC31BQ9NQW1 1179 aa30■■■□□ 2.39
SSNA1-203ENST00000463511 IFT57Q9NWB7 429 aa30■■■□□ 2.39
SSNA1-203ENST00000463511 RPS12P25398 132 aaKnown RBP29.99■■■□□ 2.39
SSNA1-203ENST00000463511 BRPF1P55201 1214 aaPredicted RBP29.98■■■□□ 2.39
SSNA1-203ENST00000463511 GNAI1P63096 354 aa29.98■■■□□ 2.39
SSNA1-203ENST00000463511 HUNKP57058 714 aa29.97■■■□□ 2.39
SSNA1-203ENST00000463511 RBM26Q5T8P6 1007 aaKnown RBP29.97■■■□□ 2.39
SSNA1-203ENST00000463511 KRT26Q7Z3Y9 468 aa29.97■■■□□ 2.39
SSNA1-203ENST00000463511 CA12O43570 354 aa29.96■■■□□ 2.39
SSNA1-203ENST00000463511 UFL1O94874 794 aa29.96■■■□□ 2.39
SSNA1-203ENST00000463511 ZC3H12CQ9C0D7 883 aaKnown RBP29.96■■■□□ 2.39
SSNA1-203ENST00000463511 ANKIB1Q9P2G1 1089 aa29.96■■■□□ 2.39
SSNA1-203ENST00000463511 CALD1Q05682 793 aaKnown RBP29.95■■■□□ 2.39
SSNA1-203ENST00000463511 JARID2Q92833 1246 aaPredicted RBP29.95■■■□□ 2.39
SSNA1-203ENST00000463511 PODXL2Q9NZ53 605 aa29.95■■■□□ 2.39
SSNA1-203ENST00000463511 ADM5C9JUS6 153 aa29.94■■■□□ 2.38
SSNA1-203ENST00000463511 PCCAP05165 728 aaPredicted RBP29.94■■■□□ 2.38
SSNA1-203ENST00000463511 HSP90B1P14625 803 aaKnown RBP29.94■■■□□ 2.38
SSNA1-203ENST00000463511 CCDC152Q4G0S7 254 aa29.94■■■□□ 2.38
SSNA1-203ENST00000463511 C8orf58Q8NAV2 365 aa29.94■■■□□ 2.38
SSNA1-203ENST00000463511 CCDC191Q8NCU4 936 aa29.94■■■□□ 2.38
SSNA1-203ENST00000463511 CCDC85AQ96PX6 553 aaPredicted RBP29.94■■■□□ 2.38
SSNA1-203ENST00000463511 AKAP11Q9UKA4 1901 aa29.94■■■□□ 2.38
SSNA1-203ENST00000463511 NOGQ13253 232 aa29.93■■■□□ 2.38
SSNA1-203ENST00000463511 KIF4BQ2VIQ3 1234 aa29.93■■■□□ 2.38
SSNA1-203ENST00000463511 DCPSQ96C86 337 aaKnown RBP29.93■■■□□ 2.38
SSNA1-203ENST00000463511 ZIC5Q96T25 663 aa29.93■■■□□ 2.38
SSNA1-203ENST00000463511 CWC25Q9NXE8 425 aaPredicted RBP29.93■■■□□ 2.38
SSNA1-203ENST00000463511 GGA1Q9UJY5 639 aa29.93■■■□□ 2.38
SSNA1-203ENST00000463511 G3V3G9 751 aa29.92■■■□□ 2.38
SSNA1-203ENST00000463511 DCAF8Q5TAQ9 597 aa29.92■■■□□ 2.38
SSNA1-203ENST00000463511 CCDC85CA6NKD9 419 aa29.91■■■□□ 2.38
SSNA1-203ENST00000463511 PDE8AO60658 829 aa29.91■■■□□ 2.38
SSNA1-203ENST00000463511 VIL1P09327 827 aaKnown RBP29.91■■■□□ 2.38
SSNA1-203ENST00000463511 GBA2Q9HCG7 927 aaPredicted RBP29.91■■■□□ 2.38
SSNA1-203ENST00000463511 METTL22Q9BUU2 404 aaPredicted RBP29.9■■■□□ 2.38
SSNA1-203ENST00000463511 GGA3Q9NZ52 723 aa29.9■■■□□ 2.38
SSNA1-203ENST00000463511 ZNF646O15015 1829 aaPredicted RBP29.89■■■□□ 2.38
SSNA1-203ENST00000463511 DDX58O95786 925 aaKnown RBP29.89■■■□□ 2.38
SSNA1-203ENST00000463511 C2orf69Q8N8R5 385 aa29.89■■■□□ 2.38
SSNA1-203ENST00000463511 ASTN2O75129 1339 aaPredicted RBP29.89■■■□□ 2.38
SSNA1-203ENST00000463511 FAM161AQ3B820 660 aa29.88■■■□□ 2.37
SSNA1-203ENST00000463511 CCDC30Q5VVM6 783 aa29.88■■■□□ 2.37
SSNA1-203ENST00000463511 RGMBQ6NW40 437 aa29.88■■■□□ 2.37
SSNA1-203ENST00000463511 MRS2Q9HD23 443 aa29.88■■■□□ 2.37
SSNA1-203ENST00000463511 ZNF609O15014 1411 aa29.88■■■□□ 2.37
SSNA1-203ENST00000463511 MAP3K2Q9Y2U5 619 aa29.87■■■□□ 2.37
SSNA1-203ENST00000463511 FAM155AB1AL88 458 aaPredicted RBP29.86■■■□□ 2.37
SSNA1-203ENST00000463511 ANKRD18AQ8IVF6 992 aa29.86■■■□□ 2.37
SSNA1-203ENST00000463511 SULF1Q8IWU6 871 aa29.86■■■□□ 2.37
SSNA1-203ENST00000463511 TSPYL6Q8N831 410 aa29.86■■■□□ 2.37
SSNA1-203ENST00000463511 MCOLN1Q9GZU1 580 aa29.86■■■□□ 2.37
SSNA1-203ENST00000463511 XDHP47989 1333 aa29.86■■■□□ 2.37
SSNA1-203ENST00000463511 RSBN1LQ6PCB5 846 aaPredicted RBP29.85■■■□□ 2.37
SSNA1-203ENST00000463511 CTSWP56202 376 aa29.83■■■□□ 2.37
SSNA1-203ENST00000463511 ZNF280AP59817 542 aaPredicted RBP29.83■■■□□ 2.37
SSNA1-203ENST00000463511 AGBL3Q8NEM8 1001 aa29.83■■■□□ 2.37
SSNA1-203ENST00000463511 ZNF157P51786 506 aaPredicted RBP29.82■■■□□ 2.36
SSNA1-203ENST00000463511 MIER1Q8N108 512 aa29.82■■■□□ 2.36
SSNA1-203ENST00000463511 CDCA5Q96FF9 252 aa29.82■■■□□ 2.36
SSNA1-203ENST00000463511 CHMP4AQ9BY43 222 aa29.82■■■□□ 2.36
SSNA1-203ENST00000463511 PAPPA2Q9BXP8 1791 aa29.82■■■□□ 2.36
SSNA1-203ENST00000463511 IGKV5-2P06315 115 aa29.81■■■□□ 2.36
SSNA1-203ENST00000463511 ANGEL2Q5VTE6 544 aaKnown RBP29.81■■■□□ 2.36
SSNA1-203ENST00000463511 KSR2Q6VAB6 950 aa29.81■■■□□ 2.36
SSNA1-203ENST00000463511 TSR2Q969E8 191 aaKnown RBP29.81■■■□□ 2.36
SSNA1-203ENST00000463511 CCDC102AQ96A19 550 aa29.81■■■□□ 2.36
SSNA1-203ENST00000463511 PI4KAP2A4QPH2 592 aa29.8■■■□□ 2.36
SSNA1-203ENST00000463511 ATP2B4P23634 1241 aa29.8■■■□□ 2.36
SSNA1-203ENST00000463511 DGKZQ13574 1117 aa29.8■■■□□ 2.36
SSNA1-203ENST00000463511 SCARF1Q14162 830 aa29.8■■■□□ 2.36
SSNA1-203ENST00000463511 PI4KAP1Q8N8J0 262 aa29.8■■■□□ 2.36
SSNA1-203ENST00000463511 CDC5LQ99459 802 aaKnown RBP29.8■■■□□ 2.36
SSNA1-203ENST00000463511 WTIPA6NIX2 430 aaPredicted RBP29.79■■■□□ 2.36
SSNA1-203ENST00000463511 KIF23Q02241 960 aaPredicted RBP29.79■■■□□ 2.36
SSNA1-203ENST00000463511 GMLQ99445 158 aa29.79■■■□□ 2.36
SSNA1-203ENST00000463511 CACNA1FO60840 1977 aa29.79■■■□□ 2.36
SSNA1-203ENST00000463511 USP17L8P0C7I0 530 aa29.78■■■□□ 2.36
SSNA1-203ENST00000463511 TTLL11Q8NHH1 800 aa29.78■■■□□ 2.36
SSNA1-203ENST00000463511 GREM2Q9H772 168 aa29.78■■■□□ 2.36
SSNA1-203ENST00000463511 MED23Q9ULK4 1368 aa29.77■■■□□ 2.36
SSNA1-203ENST00000463511 USP17L3A6NCW0 530 aa29.77■■■□□ 2.36
SSNA1-203ENST00000463511 USP17L4A6NCW7 530 aa29.77■■■□□ 2.36
SSNA1-203ENST00000463511 CCER2I3L3R5 266 aa29.77■■■□□ 2.36
SSNA1-203ENST00000463511 NEXNQ0ZGT2 675 aa29.77■■■□□ 2.36
SSNA1-203ENST00000463511 CWF19L2Q2TBE0 894 aaKnown RBP29.77■■■□□ 2.36
SSNA1-203ENST00000463511 USP17L1Q7RTZ2 530 aa29.77■■■□□ 2.36
SSNA1-203ENST00000463511 PODNQ7Z5L7 613 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms