RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 NLRP10Q86W26 655 aa14.59□□□□□ -0.07
SSR3-202ENST00000463503 REM2Q8IYK8 340 aaPredicted RBP14.59□□□□□ -0.07
SSR3-202ENST00000463503 PNISRQ8TF01 805 aaKnown RBP14.59□□□□□ -0.07
SSR3-202ENST00000463503 ECE2O60344 883 aa14.58□□□□□ -0.08
SSR3-202ENST00000463503 WASHC4Q2M389 1173 aa14.58□□□□□ -0.08
SSR3-202ENST00000463503 HABP4Q5JVS0 413 aaKnown RBP14.58□□□□□ -0.08
SSR3-202ENST00000463503 DDX46Q7L014 1031 aaKnown RBP14.58□□□□□ -0.08
SSR3-202ENST00000463503 TMC4Q7Z404 712 aa14.58□□□□□ -0.08
SSR3-202ENST00000463503 SULF1Q8IWU6 871 aa14.58□□□□□ -0.08
SSR3-202ENST00000463503 MYH3P11055 1940 aa14.58□□□□□ -0.08
SSR3-202ENST00000463503 CCDC184Q52MB2 194 aa14.57□□□□□ -0.08
SSR3-202ENST00000463503 NOM1Q5C9Z4 860 aaKnown RBP14.57□□□□□ -0.08
SSR3-202ENST00000463503 RBM26Q5T8P6 1007 aaKnown RBP14.57□□□□□ -0.08
SSR3-202ENST00000463503 MRS2Q9HD23 443 aa14.57□□□□□ -0.08
SSR3-202ENST00000463503 POLLQ9UGP5 575 aa14.57□□□□□ -0.08
SSR3-202ENST00000463503 TRIOBPQ9H2D6 2365 aa14.57□□□□□ -0.08
SSR3-202ENST00000463503 COL6A3P12111 3177 aa14.57□□□□□ -0.08
SSR3-202ENST00000463503 TBC1D8O95759 1140 aa14.56□□□□□ -0.08
SSR3-202ENST00000463503 ANXA1P04083 346 aa14.56□□□□□ -0.08
SSR3-202ENST00000463503 FBXO46Q6PJ61 603 aaPredicted RBP14.56□□□□□ -0.08
SSR3-202ENST00000463503 CELF1Q92879 486 aaKnown RBP14.56□□□□□ -0.08
SSR3-202ENST00000463503 SH3TC1Q8TE82 1336 aa14.56□□□□□ -0.08
SSR3-202ENST00000463503 OTOFQ9HC10 1997 aa14.55□□□□□ -0.08
SSR3-202ENST00000463503 RIMBP2O15034 1052 aa14.55□□□□□ -0.08
SSR3-202ENST00000463503 FKBP1BP68106 108 aa14.55□□□□□ -0.08
SSR3-202ENST00000463503 GPSM2P81274 684 aa14.55□□□□□ -0.08
SSR3-202ENST00000463503 ANGEL2Q5VTE6 544 aaKnown RBP14.55□□□□□ -0.08
SSR3-202ENST00000463503 MOB2Q70IA6 237 aa14.55□□□□□ -0.08
SSR3-202ENST00000463503 HDAC9Q9UKV0 1011 aa14.55□□□□□ -0.08
SSR3-202ENST00000463503 NSFL1CQ9UNZ2 370 aaKnown RBP14.55□□□□□ -0.08
SSR3-202ENST00000463503 GPR25O00155 361 aa14.54□□□□□ -0.08
SSR3-202ENST00000463503 VIL1P09327 827 aaKnown RBP14.54□□□□□ -0.08
SSR3-202ENST00000463503 ZNF280AP59817 542 aaPredicted RBP14.54□□□□□ -0.08
SSR3-202ENST00000463503 DOK7Q18PE1 504 aa14.54□□□□□ -0.08
SSR3-202ENST00000463503 PNNQ9H307 717 aaKnown RBP14.54□□□□□ -0.08
SSR3-202ENST00000463503 PITPNM2Q9BZ72 1349 aa14.53□□□□□ -0.08
SSR3-202ENST00000463503 FXR1P51114 621 aaKnown RBP eCLIP14.53□□□□□ -0.08
SSR3-202ENST00000463503 HSP90AB3PQ58FF7 597 aa14.53□□□□□ -0.08
SSR3-202ENST00000463503 PLEKHF1Q96S99 279 aa14.53□□□□□ -0.08
SSR3-202ENST00000463503 CFHR5Q9BXR6 569 aa14.53□□□□□ -0.08
SSR3-202ENST00000463503 TRMT112Q9UI30 125 aaKnown RBP14.53□□□□□ -0.08
SSR3-202ENST00000463503 C6orf229H3BNL8 230 aa14.52□□□□□ -0.09
SSR3-202ENST00000463503 TM4SF4P48230 202 aa14.52□□□□□ -0.09
SSR3-202ENST00000463503 SCARF1Q14162 830 aa14.52□□□□□ -0.09
SSR3-202ENST00000463503 WDR43Q15061 677 aaKnown RBP eCLIP14.52□□□□□ -0.09
SSR3-202ENST00000463503 TBC1D16Q8TBP0 767 aa14.52□□□□□ -0.09
SSR3-202ENST00000463503 R3HDMLQ9H3Y0 253 aa14.52□□□□□ -0.09
SSR3-202ENST00000463503 A0A0C4DFX4 3053 aa14.51□□□□□ -0.09
SSR3-202ENST00000463503 TCIRG1Q13488 830 aa14.51□□□□□ -0.09
SSR3-202ENST00000463503 SF3B3Q15393 1217 aaKnown RBP14.51□□□□□ -0.09
SSR3-202ENST00000463503 COPS6Q7L5N1 327 aa14.51□□□□□ -0.09
SSR3-202ENST00000463503 XAGE3Q8WTP9 111 aa14.51□□□□□ -0.09
SSR3-202ENST00000463503 ZNF428Q96B54 188 aa14.51□□□□□ -0.09
SSR3-202ENST00000463503 GMLQ99445 158 aa14.51□□□□□ -0.09
SSR3-202ENST00000463503 SCAF8Q9UPN6 1271 aaKnown RBP14.51□□□□□ -0.09
SSR3-202ENST00000463503 A0A1B0GUL6 1792 aa14.51□□□□□ -0.09
SSR3-202ENST00000463503 LAMA3Q16787 3333 aa14.51□□□□□ -0.09
SSR3-202ENST00000463503 POTEFA5A3E0 1075 aa14.5□□□□□ -0.09
SSR3-202ENST00000463503 EIF2S2P20042 333 aaKnown RBP14.5□□□□□ -0.09
SSR3-202ENST00000463503 NFE2L2Q16236 605 aa14.5□□□□□ -0.09
SSR3-202ENST00000463503 EYA3Q99504 573 aa14.5□□□□□ -0.09
SSR3-202ENST00000463503 ADAMTS8Q9UP79 889 aa14.5□□□□□ -0.09
SSR3-202ENST00000463503 UBE2Q2LH0YL09 131 aa14.49□□□□□ -0.09
SSR3-202ENST00000463503 RSBN1LQ6PCB5 846 aaPredicted RBP14.49□□□□□ -0.09
SSR3-202ENST00000463503 AGBL3Q8NEM8 1001 aa14.49□□□□□ -0.09
SSR3-202ENST00000463503 MYOZ2Q9NPC6 264 aa14.49□□□□□ -0.09
SSR3-202ENST00000463503 PODXL2Q9NZ53 605 aa14.49□□□□□ -0.09
SSR3-202ENST00000463503 TSPYL4Q9UJ04 414 aa14.49□□□□□ -0.09
SSR3-202ENST00000463503 ZSWIM8A7E2V4 1837 aa14.48□□□□□ -0.09
SSR3-202ENST00000463503 FKTNO75072 461 aa14.48□□□□□ -0.09
SSR3-202ENST00000463503 AIMP1Q12904 312 aaKnown RBP14.48□□□□□ -0.09
SSR3-202ENST00000463503 NCBP3Q53F19 620 aaKnown RBP14.48□□□□□ -0.09
SSR3-202ENST00000463503 FAM89AQ96GI7 184 aa14.48□□□□□ -0.09
SSR3-202ENST00000463503 CUL9Q8IWT3 2517 aa14.48□□□□□ -0.09
SSR3-202ENST00000463503 MKRN3Q13064 507 aaKnown RBP14.47□□□□□ -0.09
SSR3-202ENST00000463503 PRAMEF18Q5VWM3 479 aa14.47□□□□□ -0.09
SSR3-202ENST00000463503 RUNDC1Q96C34 613 aa14.47□□□□□ -0.09
SSR3-202ENST00000463503 ISCA1Q9BUE6 129 aa14.47□□□□□ -0.09
SSR3-202ENST00000463503 SSC5DA1L4H1 1573 aa14.47□□□□□ -0.09
SSR3-202ENST00000463503 UFL1O94874 794 aa14.46□□□□□ -0.09
SSR3-202ENST00000463503 SREBF2Q12772 1141 aa14.46□□□□□ -0.09
SSR3-202ENST00000463503 NECTIN2Q92692 538 aa14.46□□□□□ -0.09
SSR3-202ENST00000463503 ZC3H12CQ9C0D7 883 aaKnown RBP14.46□□□□□ -0.09
SSR3-202ENST00000463503 USP17L8P0C7I0 530 aa14.45□□□□□ -0.1
SSR3-202ENST00000463503 NBPF9Q3BBW0 867 aa14.45□□□□□ -0.1
SSR3-202ENST00000463503 OTOP1Q7RTM1 612 aa14.45□□□□□ -0.1
SSR3-202ENST00000463503 NEFMP07197 916 aa14.44□□□□□ -0.1
SSR3-202ENST00000463503 RPS8P62241 208 aaKnown RBP14.44□□□□□ -0.1
SSR3-202ENST00000463503 PTPN12Q05209 780 aaKnown RBP14.43□□□□□ -0.1
SSR3-202ENST00000463503 KRT24Q2M2I5 525 aa14.43□□□□□ -0.1
SSR3-202ENST00000463503 INTS3Q68E01 1043 aaKnown RBP14.43□□□□□ -0.1
SSR3-202ENST00000463503 PLBD2Q8NHP8 589 aa14.43□□□□□ -0.1
SSR3-202ENST00000463503 SEC31BQ9NQW1 1179 aa14.43□□□□□ -0.1
SSR3-202ENST00000463503 BABAM1Q9NWV8 329 aa14.43□□□□□ -0.1
SSR3-202ENST00000463503 CHPF2Q9P2E5 772 aa14.43□□□□□ -0.1
SSR3-202ENST00000463503 GGA1Q9UJY5 639 aa14.43□□□□□ -0.1
SSR3-202ENST00000463503 TRIM17Q9Y577 477 aa14.43□□□□□ -0.1
SSR3-202ENST00000463503 COL1A1P02452 1464 aaPredicted RBP14.43□□□□□ -0.1
SSR3-202ENST00000463503 ATP5J2-PTCD1G3V325 749 aa14.42□□□□□ -0.1
SSR3-202ENST00000463503 WNT10BO00744 389 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms