RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 DPY19L2Q6NUT2 758 aa17.23■□□□□ 0.35
SEMA3D-203ENST00000463315 JDP2Q8WYK2 163 aa17.23■□□□□ 0.35
SEMA3D-203ENST00000463315 SUCLG2Q96I99 432 aa17.23■□□□□ 0.35
SEMA3D-203ENST00000463315 CCDC85AQ96PX6 553 aaPredicted RBP17.23■□□□□ 0.35
SEMA3D-203ENST00000463315 ZNF277Q9NRM2 450 aaPredicted RBP17.23■□□□□ 0.35
SEMA3D-203ENST00000463315 GLTPD2A6NH11 291 aa17.22■□□□□ 0.35
SEMA3D-203ENST00000463315 UBTFL1P0CB47 393 aaPredicted RBP17.22■□□□□ 0.35
SEMA3D-203ENST00000463315 MPHOSPH8Q99549 860 aa17.22■□□□□ 0.35
SEMA3D-203ENST00000463315 RCAN3Q9UKA8 241 aa17.22■□□□□ 0.35
SEMA3D-203ENST00000463315 NSFL1CQ9UNZ2 370 aaKnown RBP17.22■□□□□ 0.35
SEMA3D-203ENST00000463315 TAF1P21675 1872 aa17.22■□□□□ 0.35
SEMA3D-203ENST00000463315 XDHP47989 1333 aa17.21■□□□□ 0.35
SEMA3D-203ENST00000463315 FZD9O00144 591 aa17.21■□□□□ 0.35
SEMA3D-203ENST00000463315 KIAA2012Q0VF49 1180 aa17.21■□□□□ 0.35
SEMA3D-203ENST00000463315 DZIP1LQ8IYY4 767 aaKnown RBP17.21■□□□□ 0.35
SEMA3D-203ENST00000463315 EYA3Q99504 573 aa17.21■□□□□ 0.35
SEMA3D-203ENST00000463315 BICC1Q9H694 974 aaKnown RBP17.21■□□□□ 0.35
SEMA3D-203ENST00000463315 MINPP1Q9UNW1 487 aa17.21■□□□□ 0.35
SEMA3D-203ENST00000463315 CCDC88AQ3V6T2 1871 aa17.2■□□□□ 0.34
SEMA3D-203ENST00000463315 COL4A1P02462 1669 aa17.2■□□□□ 0.34
SEMA3D-203ENST00000463315 GPSM2P81274 684 aa17.2■□□□□ 0.34
SEMA3D-203ENST00000463315 LARGE2Q8N3Y3 721 aa17.2■□□□□ 0.34
SEMA3D-203ENST00000463315 ANKRD2Q9GZV1 360 aa17.2■□□□□ 0.34
SEMA3D-203ENST00000463315 GPBP1L1Q9HC44 474 aaPredicted RBP17.2■□□□□ 0.34
SEMA3D-203ENST00000463315 ANKIB1Q9P2G1 1089 aa17.2■□□□□ 0.34
SEMA3D-203ENST00000463315 LTBP1Q14766 1721 aa17.2■□□□□ 0.34
SEMA3D-203ENST00000463315 TIAM2Q8IVF5 1701 aa17.19■□□□□ 0.34
SEMA3D-203ENST00000463315 PPIP5K2O43314 1243 aa17.19■□□□□ 0.34
SEMA3D-203ENST00000463315 ATP2B4P23634 1241 aa17.19■□□□□ 0.34
SEMA3D-203ENST00000463315 WASHC4Q2M389 1173 aa17.19■□□□□ 0.34
SEMA3D-203ENST00000463315 CHRDL2Q6WN34 429 aa17.19■□□□□ 0.34
SEMA3D-203ENST00000463315 FTSJ3Q8IY81 847 aaKnown RBP17.19■□□□□ 0.34
SEMA3D-203ENST00000463315 ANKRD44Q8N8A2 993 aa17.19■□□□□ 0.34
SEMA3D-203ENST00000463315 TBC1D16Q8TBP0 767 aa17.19■□□□□ 0.34
SEMA3D-203ENST00000463315 POLLQ9UGP5 575 aa17.19■□□□□ 0.34
SEMA3D-203ENST00000463315 GGA1Q9UJY5 639 aa17.19■□□□□ 0.34
SEMA3D-203ENST00000463315 CHMP3Q9Y3E7 222 aa17.19■□□□□ 0.34
SEMA3D-203ENST00000463315 DUOX1Q9NRD9 1551 aa17.19■□□□□ 0.34
SEMA3D-203ENST00000463315 NIM1KQ8IY84 436 aa17.18■□□□□ 0.34
SEMA3D-203ENST00000463315 CLUAP1Q96AJ1 413 aa17.18■□□□□ 0.34
SEMA3D-203ENST00000463315 LEMD3Q9Y2U8 911 aa17.18■□□□□ 0.34
SEMA3D-203ENST00000463315 C6orf229H3BNL8 230 aa17.17■□□□□ 0.34
SEMA3D-203ENST00000463315 AOC3Q16853 763 aa17.17■□□□□ 0.34
SEMA3D-203ENST00000463315 TAF7LQ5H9L4 462 aa17.17■□□□□ 0.34
SEMA3D-203ENST00000463315 LDHAL6AQ6ZMR3 332 aa17.17■□□□□ 0.34
SEMA3D-203ENST00000463315 SLC51AQ86UW1 340 aa17.17■□□□□ 0.34
SEMA3D-203ENST00000463315 TMEM57Q8N5G2 664 aa17.17■□□□□ 0.34
SEMA3D-203ENST00000463315 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.17■□□□□ 0.34
SEMA3D-203ENST00000463315 MEIS3Q99687 375 aa17.17■□□□□ 0.34
SEMA3D-203ENST00000463315 ZC3H12CQ9C0D7 883 aaKnown RBP17.17■□□□□ 0.34
SEMA3D-203ENST00000463315 FBXO3Q9UK99 471 aa17.17■□□□□ 0.34
SEMA3D-203ENST00000463315 ZNRF3Q9ULT6 936 aa17.17■□□□□ 0.34
SEMA3D-203ENST00000463315 EIF6P56537 245 aaKnown RBP17.16■□□□□ 0.34
SEMA3D-203ENST00000463315 MTX1Q13505 466 aa17.16■□□□□ 0.34
SEMA3D-203ENST00000463315 GPC2Q8N158 579 aa17.16■□□□□ 0.34
SEMA3D-203ENST00000463315 L3MBTL3Q96JM7 780 aaPredicted RBP17.16■□□□□ 0.34
SEMA3D-203ENST00000463315 UFL1O94874 794 aa17.15■□□□□ 0.34
SEMA3D-203ENST00000463315 GNAI2P04899 355 aa17.14■□□□□ 0.33
SEMA3D-203ENST00000463315 CHRNDQ07001 517 aa17.14■□□□□ 0.33
SEMA3D-203ENST00000463315 PDE3AQ14432 1141 aa17.14■□□□□ 0.33
SEMA3D-203ENST00000463315 C15orf52Q6ZUT6 534 aaKnown RBP17.14■□□□□ 0.33
SEMA3D-203ENST00000463315 CHMP4BQ9H444 224 aaKnown RBP17.14■□□□□ 0.33
SEMA3D-203ENST00000463315 TNNQ9UQP3 1299 aa17.14■□□□□ 0.33
SEMA3D-203ENST00000463315 RIPOR2Q9Y4F9 1068 aa17.14■□□□□ 0.33
SEMA3D-203ENST00000463315 LRRFIP2Q9Y608 721 aaKnown RBP17.14■□□□□ 0.33
SEMA3D-203ENST00000463315 MROH5Q6ZUA9 1318 aa17.14■□□□□ 0.33
SEMA3D-203ENST00000463315 MED23Q9ULK4 1368 aa17.14■□□□□ 0.33
SEMA3D-203ENST00000463315 COL4A5P29400 1685 aa17.13■□□□□ 0.33
SEMA3D-203ENST00000463315 WDR90Q96KV7 1748 aa17.13■□□□□ 0.33
SEMA3D-203ENST00000463315 ZBTB7BO15156 539 aaPredicted RBP17.13■□□□□ 0.33
SEMA3D-203ENST00000463315 VEGFAP15692 232 aaPredicted RBP17.13■□□□□ 0.33
SEMA3D-203ENST00000463315 TNIP1Q15025 636 aa17.13■□□□□ 0.33
SEMA3D-203ENST00000463315 YTHDC1Q96MU7 727 aaKnown RBP17.13■□□□□ 0.33
SEMA3D-203ENST00000463315 CNNM1Q9NRU3 951 aa17.13■□□□□ 0.33
SEMA3D-203ENST00000463315 IQCA1LA6NCM1 817 aa17.12■□□□□ 0.33
SEMA3D-203ENST00000463315 RLBP1P12271 317 aa17.12■□□□□ 0.33
SEMA3D-203ENST00000463315 RFX5P48382 616 aaPredicted RBP17.12■□□□□ 0.33
SEMA3D-203ENST00000463315 PODNQ7Z5L7 613 aa17.12■□□□□ 0.33
SEMA3D-203ENST00000463315 ZNF526Q8TF50 670 aaPredicted RBP17.12■□□□□ 0.33
SEMA3D-203ENST00000463315 ZNF594Q96JF6 807 aaPredicted RBP17.12■□□□□ 0.33
SEMA3D-203ENST00000463315 ZNF804BA4D1E1 1349 aa17.12■□□□□ 0.33
SEMA3D-203ENST00000463315 KIF3CO14782 793 aa17.11■□□□□ 0.33
SEMA3D-203ENST00000463315 CIAO1O76071 339 aa17.11■□□□□ 0.33
SEMA3D-203ENST00000463315 DDNO94850 711 aaPredicted RBP17.11■□□□□ 0.33
SEMA3D-203ENST00000463315 PTPN12Q05209 780 aaKnown RBP17.11■□□□□ 0.33
SEMA3D-203ENST00000463315 UBE4AQ14139 1066 aa17.11■□□□□ 0.33
SEMA3D-203ENST00000463315 ITPRIPQ8IWB1 547 aa17.11■□□□□ 0.33
SEMA3D-203ENST00000463315 NMRK2Q9NPI5 230 aa17.11■□□□□ 0.33
SEMA3D-203ENST00000463315 ZNF541Q9H0D2 1346 aa17.11■□□□□ 0.33
SEMA3D-203ENST00000463315 SPEF2Q9C093 1822 aa17.1■□□□□ 0.33
SEMA3D-203ENST00000463315 KCNJ4P48050 445 aa17.1■□□□□ 0.33
SEMA3D-203ENST00000463315 CXCL9Q07325 125 aa17.1■□□□□ 0.33
SEMA3D-203ENST00000463315 COA1Q9GZY4 146 aa17.1■□□□□ 0.33
SEMA3D-203ENST00000463315 RRAGCQ9HB90 399 aa17.1■□□□□ 0.33
SEMA3D-203ENST00000463315 COPRSQ9NQ92 184 aa17.1■□□□□ 0.33
SEMA3D-203ENST00000463315 DDX19BQ9UMR2 479 aa17.1■□□□□ 0.33
SEMA3D-203ENST00000463315 G3V3G9 751 aa17.09■□□□□ 0.33
SEMA3D-203ENST00000463315 EYA2O00167 538 aa17.09■□□□□ 0.33
SEMA3D-203ENST00000463315 RIMBP2O15034 1052 aa17.09■□□□□ 0.33
SEMA3D-203ENST00000463315 MVPQ14764 893 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms