RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 PTF1AQ7RTS3 328 aa12.21□□□□□ -0.45
MSH5-211ENST00000463144 FNBP4Q8N3X1 1017 aaPredicted RBP12.21□□□□□ -0.45
MSH5-211ENST00000463144 GZF1Q9H116 711 aaPredicted RBP12.21□□□□□ -0.45
MSH5-211ENST00000463144 LIMCH1Q9UPQ0 1083 aa12.21□□□□□ -0.45
MSH5-211ENST00000463144 AKAP2Q9Y2D5 859 aa12.21□□□□□ -0.45
MSH5-211ENST00000463144 ANKRD18BA2A2Z9 1011 aa12.21□□□□□ -0.46
MSH5-211ENST00000463144 LARGE1O95461 756 aa12.21□□□□□ -0.46
MSH5-211ENST00000463144 ZKSCAN1P17029 563 aaPredicted RBP12.21□□□□□ -0.46
MSH5-211ENST00000463144 VPS53Q5VIR6 699 aa12.21□□□□□ -0.46
MSH5-211ENST00000463144 LDHAL6AQ6ZMR3 332 aa12.21□□□□□ -0.46
MSH5-211ENST00000463144 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.21□□□□□ -0.46
MSH5-211ENST00000463144 PDRG1Q9NUG6 133 aa12.21□□□□□ -0.46
MSH5-211ENST00000463144 CYP46A1Q9Y6A2 500 aa12.21□□□□□ -0.46
MSH5-211ENST00000463144 BRD1O95696 1058 aa12.2□□□□□ -0.46
MSH5-211ENST00000463144 ILDR1Q86SU0 546 aaPredicted RBP12.2□□□□□ -0.46
MSH5-211ENST00000463144 SMARCC1Q92922 1105 aaPredicted RBP12.2□□□□□ -0.46
MSH5-211ENST00000463144 CHAMP1Q96JM3 812 aa12.2□□□□□ -0.46
MSH5-211ENST00000463144 SPEF2Q9C093 1822 aa12.2□□□□□ -0.46
MSH5-211ENST00000463144 ZNF831Q5JPB2 1677 aa12.2□□□□□ -0.46
MSH5-211ENST00000463144 SCARF1Q14162 830 aa12.2□□□□□ -0.46
MSH5-211ENST00000463144 TSGA10IPQ3SY00 556 aa12.2□□□□□ -0.46
MSH5-211ENST00000463144 VGLL2Q8N8G2 317 aa12.2□□□□□ -0.46
MSH5-211ENST00000463144 SPATA31A6Q5VVP1 1343 aa12.19□□□□□ -0.46
MSH5-211ENST00000463144 SH3TC1Q8TE82 1336 aa12.19□□□□□ -0.46
MSH5-211ENST00000463144 DDX60Q8IY21 1712 aaKnown RBP12.19□□□□□ -0.46
MSH5-211ENST00000463144 FAM177BA6PVY3 158 aa12.19□□□□□ -0.46
MSH5-211ENST00000463144 HCLS1P14317 486 aaPredicted RBP12.19□□□□□ -0.46
MSH5-211ENST00000463144 KCNQ4P56696 695 aa12.19□□□□□ -0.46
MSH5-211ENST00000463144 METTL24Q5JXM2 366 aa12.19□□□□□ -0.46
MSH5-211ENST00000463144 ZMYM1Q5SVZ6 1142 aa12.19□□□□□ -0.46
MSH5-211ENST00000463144 MCTP1Q6DN14 999 aa12.19□□□□□ -0.46
MSH5-211ENST00000463144 ATP2B3Q16720 1220 aa12.18□□□□□ -0.46
MSH5-211ENST00000463144 CCDC158Q5M9N0 1113 aa12.18□□□□□ -0.46
MSH5-211ENST00000463144 FOXD4L5Q5VV16 416 aaPredicted RBP12.18□□□□□ -0.46
MSH5-211ENST00000463144 LINC00116Q8NCU8 138 aa12.18□□□□□ -0.46
MSH5-211ENST00000463144 FOXD4L4Q8WXT5 416 aaPredicted RBP12.18□□□□□ -0.46
MSH5-211ENST00000463144 ST3GAL1Q11201 340 aa12.18□□□□□ -0.46
MSH5-211ENST00000463144 TTC39AQ5SRH9 613 aa12.18□□□□□ -0.46
MSH5-211ENST00000463144 GORABQ5T7V8 394 aa12.18□□□□□ -0.46
MSH5-211ENST00000463144 RNF20Q5VTR2 975 aa12.18□□□□□ -0.46
MSH5-211ENST00000463144 TICAM2Q86XR7 235 aa12.18□□□□□ -0.46
MSH5-211ENST00000463144 CNNM1Q9NRU3 951 aa12.18□□□□□ -0.46
MSH5-211ENST00000463144 HELLSQ9NRZ9 838 aa12.18□□□□□ -0.46
MSH5-211ENST00000463144 HMG20BQ9P0W2 317 aa12.18□□□□□ -0.46
MSH5-211ENST00000463144 LRP5O75197 1615 aa12.18□□□□□ -0.46
MSH5-211ENST00000463144 AKAP11Q9UKA4 1901 aa12.18□□□□□ -0.46
MSH5-211ENST00000463144 RNF113AO15541 343 aaKnown RBP12.17□□□□□ -0.46
MSH5-211ENST00000463144 PTMSP20962 102 aa12.17□□□□□ -0.46
MSH5-211ENST00000463144 PSMA5P28066 241 aa12.17□□□□□ -0.46
MSH5-211ENST00000463144 FKBP4Q02790 459 aaKnown RBP eCLIP12.17□□□□□ -0.46
MSH5-211ENST00000463144 AK7Q96M32 723 aa12.17□□□□□ -0.46
MSH5-211ENST00000463144 UTP14AQ9BVJ6 771 aaKnown RBP12.17□□□□□ -0.46
MSH5-211ENST00000463144 LMBRD1Q9NUN5 540 aa12.17□□□□□ -0.46
MSH5-211ENST00000463144 BCORQ6W2J9 1755 aa12.17□□□□□ -0.46
MSH5-211ENST00000463144 DTNBO60941 627 aa12.17□□□□□ -0.46
MSH5-211ENST00000463144 NTSR2O95665 410 aa12.17□□□□□ -0.46
MSH5-211ENST00000463144 CYP21A2P08686 494 aa12.17□□□□□ -0.46
MSH5-211ENST00000463144 RPS6KB1P23443 525 aa12.17□□□□□ -0.46
MSH5-211ENST00000463144 ZAP70P43403 619 aa12.17□□□□□ -0.46
MSH5-211ENST00000463144 ME3Q16798 604 aa12.17□□□□□ -0.46
MSH5-211ENST00000463144 SKOR2Q2VWA4 1001 aaPredicted RBP12.17□□□□□ -0.46
MSH5-211ENST00000463144 PI16Q6UXB8 463 aa12.17□□□□□ -0.46
MSH5-211ENST00000463144 TCEANC2Q96MN5 208 aa12.17□□□□□ -0.46
MSH5-211ENST00000463144 USP21Q9UK80 565 aa12.17□□□□□ -0.46
MSH5-211ENST00000463144 TPCN1Q9ULQ1 816 aa12.17□□□□□ -0.46
MSH5-211ENST00000463144 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
MSH5-211ENST00000463144 MAST3O60307 1309 aa12.17□□□□□ -0.46
MSH5-211ENST00000463144 THSD7AQ9UPZ6 1657 aa12.16□□□□□ -0.46
MSH5-211ENST00000463144 PDE8BO95263 885 aa12.16□□□□□ -0.46
MSH5-211ENST00000463144 PARP10Q53GL7 1025 aa12.16□□□□□ -0.46
MSH5-211ENST00000463144 BLOC1S2Q6QNY1 142 aa12.16□□□□□ -0.46
MSH5-211ENST00000463144 SMIM5Q71RC9 77 aa12.16□□□□□ -0.46
MSH5-211ENST00000463144 ALDH8A1Q9H2A2 487 aaPredicted RBP12.16□□□□□ -0.46
MSH5-211ENST00000463144 SEC31BQ9NQW1 1179 aa12.16□□□□□ -0.46
MSH5-211ENST00000463144 NIP7Q9Y221 180 aaKnown RBP eCLIP12.16□□□□□ -0.46
MSH5-211ENST00000463144 GOLGA6L22H0YM25 854 aa12.16□□□□□ -0.46
MSH5-211ENST00000463144 M0R2C6 588 aa12.16□□□□□ -0.46
MSH5-211ENST00000463144 FAM182BQ5T319 152 aa12.16□□□□□ -0.46
MSH5-211ENST00000463144 CCDC83Q8IWF9 413 aa12.16□□□□□ -0.46
MSH5-211ENST00000463144 OSBP2Q969R2 916 aa12.16□□□□□ -0.46
MSH5-211ENST00000463144 ZSCAN31Q96LW9 406 aaPredicted RBP12.16□□□□□ -0.46
MSH5-211ENST00000463144 A0A0G2JLW4 131 aa12.15□□□□□ -0.46
MSH5-211ENST00000463144 FSD2A1L4K1 749 aa12.15□□□□□ -0.46
MSH5-211ENST00000463144 MCAMP43121 646 aa12.15□□□□□ -0.46
MSH5-211ENST00000463144 TOB2Q14106 344 aaPredicted RBP12.15□□□□□ -0.46
MSH5-211ENST00000463144 HELBQ8NG08 1087 aaPredicted RBP12.15□□□□□ -0.46
MSH5-211ENST00000463144 LAMB2P55268 1798 aa12.15□□□□□ -0.46
MSH5-211ENST00000463144 BTAF1O14981 1849 aa12.15□□□□□ -0.46
MSH5-211ENST00000463144 LAMA4Q16363 1823 aa12.15□□□□□ -0.46
MSH5-211ENST00000463144 MYO5AQ9Y4I1 1855 aaKnown RBP12.15□□□□□ -0.47
MSH5-211ENST00000463144 COL4A1P02462 1669 aa12.15□□□□□ -0.47
MSH5-211ENST00000463144 ABCC12Q96J65 1359 aa12.14□□□□□ -0.47
MSH5-211ENST00000463144 HSPD1P10809 573 aaKnown RBP12.14□□□□□ -0.47
MSH5-211ENST00000463144 FGFR2P21802 821 aa12.14□□□□□ -0.47
MSH5-211ENST00000463144 STOX1Q6ZVD7 989 aa12.14□□□□□ -0.47
MSH5-211ENST00000463144 NECAB1Q8N987 351 aa12.14□□□□□ -0.47
MSH5-211ENST00000463144 DSCC1Q9BVC3 393 aa12.14□□□□□ -0.47
MSH5-211ENST00000463144 SH2B1Q9NRF2 756 aaPredicted RBP12.14□□□□□ -0.47
MSH5-211ENST00000463144 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.14□□□□□ -0.47
MSH5-211ENST00000463144 SNAP23O00161 211 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms