RNA–Protein interactions for RNA: ENST00000463094.5

MSH5-210, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-210ENST00000463094 F6X3S4 739 aa25.25■■□□□ 1.63
MSH5-210ENST00000463094 H7C1D1 291 aa25.25■■□□□ 1.63
MSH5-210ENST00000463094 ATP2B4P23634 1241 aa25.25■■□□□ 1.63
MSH5-210ENST00000463094 DOK7Q18PE1 504 aa25.25■■□□□ 1.63
MSH5-210ENST00000463094 MPHOSPH8Q99549 860 aa25.25■■□□□ 1.63
MSH5-210ENST00000463094 DUOX1Q9NRD9 1551 aa25.25■■□□□ 1.63
MSH5-210ENST00000463094 CACNA1FO60840 1977 aa25.25■■□□□ 1.63
MSH5-210ENST00000463094 RTL9Q8NET4 1388 aa25.24■■□□□ 1.63
MSH5-210ENST00000463094 TMEM88BA6NKF7 163 aa25.24■■□□□ 1.63
MSH5-210ENST00000463094 SLC4A10Q6U841 1118 aa25.24■■□□□ 1.63
MSH5-210ENST00000463094 BSDC1Q9NW68 430 aaPredicted RBP25.24■■□□□ 1.63
MSH5-210ENST00000463094 PASKQ96RG2 1323 aa25.23■■□□□ 1.63
MSH5-210ENST00000463094 YDJCA8MPS7 323 aa25.23■■□□□ 1.63
MSH5-210ENST00000463094 PLA2G12BQ9BX93 195 aa25.23■■□□□ 1.63
MSH5-210ENST00000463094 C9orf78Q9NZ63 289 aaPredicted RBP25.23■■□□□ 1.63
MSH5-210ENST00000463094 CHMP3Q9Y3E7 222 aa25.23■■□□□ 1.63
MSH5-210ENST00000463094 ITGBL1O95965 494 aaPredicted RBP25.22■■□□□ 1.63
MSH5-210ENST00000463094 GPR101Q96P66 508 aaPredicted RBP25.22■■□□□ 1.63
MSH5-210ENST00000463094 CNOT7Q9UIV1 285 aaKnown RBP25.22■■□□□ 1.63
MSH5-210ENST00000463094 ITGA6P23229 1130 aa25.21■■□□□ 1.63
MSH5-210ENST00000463094 RPS12P25398 132 aaKnown RBP25.21■■□□□ 1.63
MSH5-210ENST00000463094 BEND3Q5T5X7 828 aa25.21■■□□□ 1.63
MSH5-210ENST00000463094 JMYQ8N9B5 988 aa25.21■■□□□ 1.63
MSH5-210ENST00000463094 ANKRD18BA2A2Z9 1011 aa25.2■■□□□ 1.62
MSH5-210ENST00000463094 PSMD14O00487 310 aa25.2■■□□□ 1.62
MSH5-210ENST00000463094 SRCIN1Q9C0H9 1055 aa25.2■■□□□ 1.62
MSH5-210ENST00000463094 ALDH1L1O75891 902 aa25.19■■□□□ 1.62
MSH5-210ENST00000463094 FAM161AQ3B820 660 aa25.19■■□□□ 1.62
MSH5-210ENST00000463094 MICALL2Q8IY33 904 aa25.19■■□□□ 1.62
MSH5-210ENST00000463094 DPF2Q92785 391 aa25.19■■□□□ 1.62
MSH5-210ENST00000463094 ANKRD2Q9GZV1 360 aa25.19■■□□□ 1.62
MSH5-210ENST00000463094 MKRN1Q9UHC7 482 aaKnown RBP25.19■■□□□ 1.62
MSH5-210ENST00000463094 MINPP1Q9UNW1 487 aa25.19■■□□□ 1.62
MSH5-210ENST00000463094 ZBTB12Q9Y330 459 aaPredicted RBP25.19■■□□□ 1.62
MSH5-210ENST00000463094 COL4A1P02462 1669 aa25.19■■□□□ 1.62
MSH5-210ENST00000463094 GRM8O00222 908 aa25.18■■□□□ 1.62
MSH5-210ENST00000463094 KCNJ4P48050 445 aa25.18■■□□□ 1.62
MSH5-210ENST00000463094 IFIT5Q13325 482 aaKnown RBP25.18■■□□□ 1.62
MSH5-210ENST00000463094 TAF7LQ5H9L4 462 aa25.18■■□□□ 1.62
MSH5-210ENST00000463094 ABT1Q9ULW3 272 aaKnown RBP25.18■■□□□ 1.62
MSH5-210ENST00000463094 ADAMTSL1Q8N6G6 1762 aa25.18■■□□□ 1.62
MSH5-210ENST00000463094 LTBP1Q14766 1721 aa25.17■■□□□ 1.62
MSH5-210ENST00000463094 CASP7P55210 303 aa25.17■■□□□ 1.62
MSH5-210ENST00000463094 SLFN5Q08AF3 891 aa25.17■■□□□ 1.62
MSH5-210ENST00000463094 ZC3H15Q8WU90 426 aaKnown RBP25.17■■□□□ 1.62
MSH5-210ENST00000463094 MYH3P11055 1940 aa25.17■■□□□ 1.62
MSH5-210ENST00000463094 CSF1RP07333 972 aa25.16■■□□□ 1.62
MSH5-210ENST00000463094 PTPRCP08575 1304 aa25.15■■□□□ 1.62
MSH5-210ENST00000463094 CCT4P50991 539 aaKnown RBP25.15■■□□□ 1.62
MSH5-210ENST00000463094 CCDC57Q2TAC2 916 aa25.15■■□□□ 1.62
MSH5-210ENST00000463094 PODNQ7Z5L7 613 aa25.15■■□□□ 1.62
MSH5-210ENST00000463094 LEMD3Q9Y2U8 911 aa25.15■■□□□ 1.62
MSH5-210ENST00000463094 MED23Q9ULK4 1368 aa25.14■■□□□ 1.61
MSH5-210ENST00000463094 VIL1P09327 827 aaKnown RBP25.12■■□□□ 1.61
MSH5-210ENST00000463094 RBM26Q5T8P6 1007 aaKnown RBP25.12■■□□□ 1.61
MSH5-210ENST00000463094 LMBR1LQ6UX01 489 aa25.12■■□□□ 1.61
MSH5-210ENST00000463094 MRPL50Q8N5N7 158 aaKnown RBP25.12■■□□□ 1.61
MSH5-210ENST00000463094 FBXW7Q969H0 707 aa25.12■■□□□ 1.61
MSH5-210ENST00000463094 KCNQ5Q9NR82 932 aa25.12■■□□□ 1.61
MSH5-210ENST00000463094 CNTNAP1P78357 1384 aa25.12■■□□□ 1.61
MSH5-210ENST00000463094 USP17L3A6NCW0 530 aa25.11■■□□□ 1.61
MSH5-210ENST00000463094 USP17L4A6NCW7 530 aa25.11■■□□□ 1.61
MSH5-210ENST00000463094 FOXO4P98177 505 aa25.11■■□□□ 1.61
MSH5-210ENST00000463094 DEFB115Q30KQ5 88 aa25.11■■□□□ 1.61
MSH5-210ENST00000463094 TBC1D10BQ4KMP7 808 aaPredicted RBP25.11■■□□□ 1.61
MSH5-210ENST00000463094 PAXIP1Q6ZW49 1069 aaPredicted RBP25.11■■□□□ 1.61
MSH5-210ENST00000463094 CDC37L1Q7L3B6 337 aa25.11■■□□□ 1.61
MSH5-210ENST00000463094 USP17L1Q7RTZ2 530 aa25.11■■□□□ 1.61
MSH5-210ENST00000463094 TRPM4Q8TD43 1214 aa25.11■■□□□ 1.61
MSH5-210ENST00000463094 SMC4Q9NTJ3 1288 aa25.11■■□□□ 1.61
MSH5-210ENST00000463094 ZNF804BA4D1E1 1349 aa25.11■■□□□ 1.61
MSH5-210ENST00000463094 ALDH1L2Q3SY69 923 aa25.1■■□□□ 1.61
MSH5-210ENST00000463094 RSBN1LQ6PCB5 846 aaPredicted RBP25.1■■□□□ 1.61
MSH5-210ENST00000463094 SAMD7Q7Z3H4 446 aa25.1■■□□□ 1.61
MSH5-210ENST00000463094 AGBL3Q8NEM8 1001 aa25.1■■□□□ 1.61
MSH5-210ENST00000463094 SSH1Q8WYL5 1049 aa25.1■■□□□ 1.61
MSH5-210ENST00000463094 DCPSQ96C86 337 aaKnown RBP25.1■■□□□ 1.61
MSH5-210ENST00000463094 CDCA7LQ96GN5 454 aa25.1■■□□□ 1.61
MSH5-210ENST00000463094 COA1Q9GZY4 146 aa25.1■■□□□ 1.61
MSH5-210ENST00000463094 TRAF5O00463 557 aa25.09■■□□□ 1.61
MSH5-210ENST00000463094 CT47B1P0C2W7 299 aaPredicted RBP25.09■■□□□ 1.61
MSH5-210ENST00000463094 CHRNDQ07001 517 aa25.09■■□□□ 1.61
MSH5-210ENST00000463094 SPEF2Q9C093 1822 aa25.08■■□□□ 1.61
MSH5-210ENST00000463094 SHTN1A0MZ66 631 aa25.08■■□□□ 1.61
MSH5-210ENST00000463094 KIF4BQ2VIQ3 1234 aa25.08■■□□□ 1.61
MSH5-210ENST00000463094 GLIS2Q9BZE0 524 aaPredicted RBP25.08■■□□□ 1.61
MSH5-210ENST00000463094 ZNF408Q9H9D4 720 aa25.08■■□□□ 1.61
MSH5-210ENST00000463094 CNNM1Q9NRU3 951 aa25.08■■□□□ 1.61
MSH5-210ENST00000463094 PGAP2Q9UHJ9 254 aa25.08■■□□□ 1.61
MSH5-210ENST00000463094 HSPA1AP0DMV8 641 aaKnown RBP25.07■■□□□ 1.6
MSH5-210ENST00000463094 HSPA1BP0DMV9 641 aaKnown RBP25.07■■□□□ 1.6
MSH5-210ENST00000463094 HIRAP54198 1017 aaPredicted RBP25.07■■□□□ 1.6
MSH5-210ENST00000463094 LDHAL6AQ6ZMR3 332 aa25.07■■□□□ 1.6
MSH5-210ENST00000463094 RASSF10A6NK89 507 aa25.06■■□□□ 1.6
MSH5-210ENST00000463094 CELF2O95319 508 aaKnown RBP25.06■■□□□ 1.6
MSH5-210ENST00000463094 USP17L8P0C7I0 530 aa25.06■■□□□ 1.6
MSH5-210ENST00000463094 DIEXFQ68CQ4 756 aaKnown RBP25.06■■□□□ 1.6
MSH5-210ENST00000463094 OGFOD1Q8N543 542 aa25.06■■□□□ 1.6
MSH5-210ENST00000463094 ECE1P42892 770 aa25.05■■□□□ 1.6
MSH5-210ENST00000463094 VEGFBP49765 207 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms