RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 COL3A1P02461 1466 aaPredicted RBP10.6□□□□□ -0.71
GARNL3-212ENST00000463005 KIF7Q2M1P5 1343 aa10.59□□□□□ -0.71
GARNL3-212ENST00000463005 PRAMEF22A3QJZ6 481 aa10.59□□□□□ -0.71
GARNL3-212ENST00000463005 FAM177BA6PVY3 158 aa10.59□□□□□ -0.71
GARNL3-212ENST00000463005 NBPF26B4DH59 902 aa10.59□□□□□ -0.71
GARNL3-212ENST00000463005 ERVV-1B6SEH8 477 aa10.59□□□□□ -0.71
GARNL3-212ENST00000463005 CA12O43570 354 aa10.59□□□□□ -0.71
GARNL3-212ENST00000463005 HOXA10P31260 410 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-212ENST00000463005 PRKAR2BP31323 418 aa10.59□□□□□ -0.71
GARNL3-212ENST00000463005 HIC1Q14526 733 aa10.59□□□□□ -0.71
GARNL3-212ENST00000463005 NBPF10Q6P3W6 841 aaKnown RBP10.59□□□□□ -0.71
GARNL3-212ENST00000463005 NBPF15Q8N660 670 aa10.59□□□□□ -0.71
GARNL3-212ENST00000463005 CFAP53Q96M91 514 aa10.59□□□□□ -0.71
GARNL3-212ENST00000463005 NUDCQ9Y266 331 aa10.59□□□□□ -0.71
GARNL3-212ENST00000463005 TLL2Q9Y6L7 1015 aa10.59□□□□□ -0.71
GARNL3-212ENST00000463005 SNED1Q8TER0 1413 aa10.58□□□□□ -0.72
GARNL3-212ENST00000463005 THSD7BQ9C0I4 1608 aa10.58□□□□□ -0.72
GARNL3-212ENST00000463005 CASP8AP2Q9UKL3 1982 aa10.58□□□□□ -0.72
GARNL3-212ENST00000463005 EPS15P42566 896 aa10.58□□□□□ -0.72
GARNL3-212ENST00000463005 SCNN1DP51172 638 aa10.58□□□□□ -0.72
GARNL3-212ENST00000463005 HLFQ16534 295 aa10.58□□□□□ -0.72
GARNL3-212ENST00000463005 CST9Q5W186 159 aa10.58□□□□□ -0.72
GARNL3-212ENST00000463005 CYP4F22Q6NT55 531 aa10.58□□□□□ -0.72
GARNL3-212ENST00000463005 LARGE2Q8N3Y3 721 aa10.58□□□□□ -0.72
GARNL3-212ENST00000463005 RPGRQ92834 1020 aaKnown RBP10.58□□□□□ -0.72
GARNL3-212ENST00000463005 HHIPL1Q96JK4 782 aa10.58□□□□□ -0.72
GARNL3-212ENST00000463005 CRAMP1Q96RY5 1269 aa10.58□□□□□ -0.72
GARNL3-212ENST00000463005 RSPH6AQ9H0K4 717 aa10.58□□□□□ -0.72
GARNL3-212ENST00000463005 TMX4Q9H1E5 349 aaPredicted RBP10.58□□□□□ -0.72
GARNL3-212ENST00000463005 TAF7Q15545 349 aaPredicted RBP10.57□□□□□ -0.72
GARNL3-212ENST00000463005 NIM1KQ8IY84 436 aa10.57□□□□□ -0.72
GARNL3-212ENST00000463005 RBM17Q96I25 401 aaKnown RBP10.57□□□□□ -0.72
GARNL3-212ENST00000463005 ADARB2Q9NS39 739 aaKnown RBP10.57□□□□□ -0.72
GARNL3-212ENST00000463005 LTBP1Q14766 1721 aa10.57□□□□□ -0.72
GARNL3-212ENST00000463005 SUPT20HQ8NEM7 779 aa10.56□□□□□ -0.72
GARNL3-212ENST00000463005 RIC1Q4ADV7 1423 aa10.56□□□□□ -0.72
GARNL3-212ENST00000463005 IBTKQ9P2D0 1353 aaPredicted RBP10.55□□□□□ -0.72
GARNL3-212ENST00000463005 LAMB4A4D0S4 1761 aa10.55□□□□□ -0.72
GARNL3-212ENST00000463005 FMR1Q06787 632 aaKnown RBP eCLIP10.55□□□□□ -0.72
GARNL3-212ENST00000463005 GRM1Q13255 1194 aa10.55□□□□□ -0.72
GARNL3-212ENST00000463005 TYW1BQ6NUM6 668 aa10.55□□□□□ -0.72
GARNL3-212ENST00000463005 MCM10Q7L590 875 aa10.55□□□□□ -0.72
GARNL3-212ENST00000463005 SAPCD2Q86UD0 394 aa10.55□□□□□ -0.72
GARNL3-212ENST00000463005 NUTM1Q86Y26 1132 aa10.55□□□□□ -0.72
GARNL3-212ENST00000463005 ZNF454Q8N9F8 522 aa10.55□□□□□ -0.72
GARNL3-212ENST00000463005 PNISRQ8TF01 805 aaKnown RBP10.55□□□□□ -0.72
GARNL3-212ENST00000463005 EPAS1Q99814 870 aa10.55□□□□□ -0.72
GARNL3-212ENST00000463005 GPRC5DQ9NZD1 345 aa10.55□□□□□ -0.72
GARNL3-212ENST00000463005 PGAP2Q9UHJ9 254 aa10.55□□□□□ -0.72
GARNL3-212ENST00000463005 MAP3K15Q6ZN16 1313 aa10.55□□□□□ -0.72
GARNL3-212ENST00000463005 TRAF5O00463 557 aa10.54□□□□□ -0.72
GARNL3-212ENST00000463005 PPEF1O14829 653 aaPredicted RBP10.54□□□□□ -0.72
GARNL3-212ENST00000463005 PPIP5K2O43314 1243 aa10.54□□□□□ -0.72
GARNL3-212ENST00000463005 KIF6Q6ZMV9 814 aa10.54□□□□□ -0.72
GARNL3-212ENST00000463005 PPP1R42Q7Z4L9 355 aa10.54□□□□□ -0.72
GARNL3-212ENST00000463005 PARP9Q8IXQ6 854 aa10.54□□□□□ -0.72
GARNL3-212ENST00000463005 NLRP3Q96P20 1036 aa10.54□□□□□ -0.72
GARNL3-212ENST00000463005 FAM117AQ9C073 453 aa10.54□□□□□ -0.72
GARNL3-212ENST00000463005 ZNRF3Q9ULT6 936 aa10.54□□□□□ -0.72
GARNL3-212ENST00000463005 COL4A5P29400 1685 aa10.53□□□□□ -0.72
GARNL3-212ENST00000463005 AOC2O75106 756 aa10.53□□□□□ -0.72
GARNL3-212ENST00000463005 CELF2O95319 508 aaKnown RBP10.53□□□□□ -0.72
GARNL3-212ENST00000463005 U2AF1L5P0DN76 240 aaPredicted RBP10.53□□□□□ -0.72
GARNL3-212ENST00000463005 FOSBP53539 338 aa10.53□□□□□ -0.72
GARNL3-212ENST00000463005 U2AF1Q01081 240 aaKnown RBP eCLIP10.53□□□□□ -0.72
GARNL3-212ENST00000463005 CXCL9Q07325 125 aa10.53□□□□□ -0.72
GARNL3-212ENST00000463005 SLC10A5Q5PT55 438 aa10.53□□□□□ -0.72
GARNL3-212ENST00000463005 SUSD4Q5VX71 490 aa10.53□□□□□ -0.72
GARNL3-212ENST00000463005 CDC37L1Q7L3B6 337 aa10.53□□□□□ -0.72
GARNL3-212ENST00000463005 ZNF34Q8IZ26 560 aa10.53□□□□□ -0.72
GARNL3-212ENST00000463005 NGEFQ8N5V2 710 aa10.53□□□□□ -0.72
GARNL3-212ENST00000463005 MCOLN1Q9GZU1 580 aa10.53□□□□□ -0.72
GARNL3-212ENST00000463005 ATP6V0A2Q9Y487 856 aa10.53□□□□□ -0.72
GARNL3-212ENST00000463005 POLR2AP24928 1970 aaKnown RBP10.53□□□□□ -0.72
GARNL3-212ENST00000463005 CDHR2Q9BYE9 1310 aa10.53□□□□□ -0.72
GARNL3-212ENST00000463005 ABCC12Q96J65 1359 aa10.52□□□□□ -0.72
GARNL3-212ENST00000463005 BBOX1O75936 387 aa10.52□□□□□ -0.73
GARNL3-212ENST00000463005 NEFMP07197 916 aa10.52□□□□□ -0.73
GARNL3-212ENST00000463005 DCTN1Q14203 1278 aa10.52□□□□□ -0.73
GARNL3-212ENST00000463005 TNIP1Q15025 636 aa10.52□□□□□ -0.73
GARNL3-212ENST00000463005 PARP10Q53GL7 1025 aa10.52□□□□□ -0.73
GARNL3-212ENST00000463005 GPR153Q6NV75 609 aa10.52□□□□□ -0.73
GARNL3-212ENST00000463005 GIGYF2Q6Y7W6 1299 aaKnown RBP10.52□□□□□ -0.73
GARNL3-212ENST00000463005 NLRP7Q8WX94 980 aa10.52□□□□□ -0.73
GARNL3-212ENST00000463005 REPIN1Q9BWE0 567 aaKnown RBP10.52□□□□□ -0.73
GARNL3-212ENST00000463005 RTFDC1Q9BY42 306 aaPredicted RBP10.52□□□□□ -0.73
GARNL3-212ENST00000463005 RRP7AQ9Y3A4 280 aaKnown RBP10.52□□□□□ -0.73
GARNL3-212ENST00000463005 DLG5Q8TDM6 1919 aa10.52□□□□□ -0.73
GARNL3-212ENST00000463005 AKAP11Q9UKA4 1901 aa10.51□□□□□ -0.73
GARNL3-212ENST00000463005 GPTP24298 496 aa10.51□□□□□ -0.73
GARNL3-212ENST00000463005 NOGQ13253 232 aa10.51□□□□□ -0.73
GARNL3-212ENST00000463005 DGKZQ13574 1117 aa10.51□□□□□ -0.73
GARNL3-212ENST00000463005 CNGB1Q14028 1251 aaPredicted RBP10.51□□□□□ -0.73
GARNL3-212ENST00000463005 AOC3Q16853 763 aa10.51□□□□□ -0.73
GARNL3-212ENST00000463005 DOK7Q18PE1 504 aa10.51□□□□□ -0.73
GARNL3-212ENST00000463005 CIAPIN1Q6FI81 312 aa10.51□□□□□ -0.73
GARNL3-212ENST00000463005 TTLL7Q6ZT98 887 aa10.51□□□□□ -0.73
GARNL3-212ENST00000463005 SP8Q8IXZ3 490 aa10.51□□□□□ -0.73
GARNL3-212ENST00000463005 PHOX2BQ99453 314 aa10.51□□□□□ -0.73
GARNL3-212ENST00000463005 BCL2L13Q9BXK5 485 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms