RNA–Protein interactions for RNA: ENST00000462944.1

MDH1-209, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-209ENST00000462944 WASHC4Q2M389 1173 aa11.94□□□□□ -0.5
MDH1-209ENST00000462944 C3orf67Q6ZVT6 689 aa11.94□□□□□ -0.5
MDH1-209ENST00000462944 EYA3Q99504 573 aa11.94□□□□□ -0.5
MDH1-209ENST00000462944 RNF186Q9NXI6 227 aa11.94□□□□□ -0.5
MDH1-209ENST00000462944 MIS18AQ9NYP9 233 aa11.94□□□□□ -0.5
MDH1-209ENST00000462944 LAMB1P07942 1786 aa11.94□□□□□ -0.5
MDH1-209ENST00000462944 RBBP6Q7Z6E9 1792 aaKnown RBP11.94□□□□□ -0.5
MDH1-209ENST00000462944 ZBED9Q6R2W3 1325 aa11.93□□□□□ -0.5
MDH1-209ENST00000462944 YDJCA8MPS7 323 aa11.93□□□□□ -0.5
MDH1-209ENST00000462944 KIF23Q02241 960 aaPredicted RBP11.93□□□□□ -0.5
MDH1-209ENST00000462944 NOM1Q5C9Z4 860 aaKnown RBP11.93□□□□□ -0.5
MDH1-209ENST00000462944 SULF1Q8IWU6 871 aa11.93□□□□□ -0.5
MDH1-209ENST00000462944 MYH3P11055 1940 aa11.93□□□□□ -0.5
MDH1-209ENST00000462944 PSMD14O00487 310 aa11.92□□□□□ -0.5
MDH1-209ENST00000462944 TRPA1O75762 1119 aa11.92□□□□□ -0.5
MDH1-209ENST00000462944 TCIRG1Q13488 830 aa11.92□□□□□ -0.5
MDH1-209ENST00000462944 NFE2L2Q16236 605 aa11.92□□□□□ -0.5
MDH1-209ENST00000462944 LRP10Q7Z4F1 713 aa11.92□□□□□ -0.5
MDH1-209ENST00000462944 NLRP10Q86W26 655 aa11.92□□□□□ -0.5
MDH1-209ENST00000462944 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
MDH1-209ENST00000462944 TRMT112Q9UI30 125 aaKnown RBP11.92□□□□□ -0.5
MDH1-209ENST00000462944 HSP90B1P14625 803 aaKnown RBP11.91□□□□□ -0.5
MDH1-209ENST00000462944 FXR2P51116 673 aaKnown RBP eCLIP11.91□□□□□ -0.5
MDH1-209ENST00000462944 SAMD7Q7Z3H4 446 aa11.91□□□□□ -0.5
MDH1-209ENST00000462944 ZIC5Q96T25 663 aa11.91□□□□□ -0.5
MDH1-209ENST00000462944 PITPNM2Q9BZ72 1349 aa11.9□□□□□ -0.5
MDH1-209ENST00000462944 MAPK8IP3Q9UPT6 1336 aa11.9□□□□□ -0.5
MDH1-209ENST00000462944 SOX10P56693 466 aa11.9□□□□□ -0.5
MDH1-209ENST00000462944 LMOD3Q0VAK6 560 aa11.9□□□□□ -0.5
MDH1-209ENST00000462944 CNGB1Q14028 1251 aaPredicted RBP11.9□□□□□ -0.5
MDH1-209ENST00000462944 PDIA6Q15084 440 aa11.9□□□□□ -0.5
MDH1-209ENST00000462944 SF3B3Q15393 1217 aaKnown RBP11.9□□□□□ -0.5
MDH1-209ENST00000462944 KIF4BQ2VIQ3 1234 aa11.9□□□□□ -0.5
MDH1-209ENST00000462944 CSRNP1Q96S65 589 aa11.9□□□□□ -0.5
MDH1-209ENST00000462944 PLEKHF1Q96S99 279 aa11.9□□□□□ -0.5
MDH1-209ENST00000462944 TSPYL4Q9UJ04 414 aa11.9□□□□□ -0.5
MDH1-209ENST00000462944 ECM29Q5VYK3 1845 aa11.9□□□□□ -0.5
MDH1-209ENST00000462944 ECE2O60344 883 aa11.89□□□□□ -0.51
MDH1-209ENST00000462944 VIL1P09327 827 aaKnown RBP11.89□□□□□ -0.51
MDH1-209ENST00000462944 TBC1D10BQ4KMP7 808 aaPredicted RBP11.89□□□□□ -0.51
MDH1-209ENST00000462944 AGBL3Q8NEM8 1001 aa11.89□□□□□ -0.51
MDH1-209ENST00000462944 NSFL1CQ9UNZ2 370 aaKnown RBP11.89□□□□□ -0.51
MDH1-209ENST00000462944 C6orf229H3BNL8 230 aa11.88□□□□□ -0.51
MDH1-209ENST00000462944 HCLS1P14317 486 aaPredicted RBP11.88□□□□□ -0.51
MDH1-209ENST00000462944 EIF2S2P20042 333 aaKnown RBP11.88□□□□□ -0.51
MDH1-209ENST00000462944 MMP14P50281 582 aa11.88□□□□□ -0.51
MDH1-209ENST00000462944 HNRNPUQ00839 825 aaKnown RBP eCLIP11.88□□□□□ -0.51
MDH1-209ENST00000462944 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
MDH1-209ENST00000462944 COPS6Q7L5N1 327 aa11.88□□□□□ -0.51
MDH1-209ENST00000462944 ZC3H12CQ9C0D7 883 aaKnown RBP11.88□□□□□ -0.51
MDH1-209ENST00000462944 DBNDD1Q9H9R9 158 aa11.88□□□□□ -0.51
MDH1-209ENST00000462944 GGA3Q9NZ52 723 aa11.88□□□□□ -0.51
MDH1-209ENST00000462944 PODXL2Q9NZ53 605 aa11.88□□□□□ -0.51
MDH1-209ENST00000462944 HDAC9Q9UKV0 1011 aa11.88□□□□□ -0.51
MDH1-209ENST00000462944 HPS5Q9UPZ3 1129 aa11.88□□□□□ -0.51
MDH1-209ENST00000462944 SHTN1A0MZ66 631 aa11.87□□□□□ -0.51
MDH1-209ENST00000462944 ADM5C9JUS6 153 aa11.87□□□□□ -0.51
MDH1-209ENST00000462944 G3V3G9 751 aa11.87□□□□□ -0.51
MDH1-209ENST00000462944 DCAF8Q5TAQ9 597 aa11.87□□□□□ -0.51
MDH1-209ENST00000462944 SLC51AQ86UW1 340 aa11.87□□□□□ -0.51
MDH1-209ENST00000462944 RASAL3Q86YV0 1011 aa11.87□□□□□ -0.51
MDH1-209ENST00000462944 CDCA5Q96FF9 252 aa11.87□□□□□ -0.51
MDH1-209ENST00000462944 HAX1O00165 279 aa11.86□□□□□ -0.51
MDH1-209ENST00000462944 HOXB7P09629 217 aa11.86□□□□□ -0.51
MDH1-209ENST00000462944 ZNF280AP59817 542 aaPredicted RBP11.86□□□□□ -0.51
MDH1-209ENST00000462944 FBXO46Q6PJ61 603 aaPredicted RBP11.86□□□□□ -0.51
MDH1-209ENST00000462944 PLBD2Q8NHP8 589 aa11.86□□□□□ -0.51
MDH1-209ENST00000462944 XAGE3Q8WTP9 111 aa11.86□□□□□ -0.51
MDH1-209ENST00000462944 THUMPD2Q9BTF0 503 aaKnown RBP11.86□□□□□ -0.51
MDH1-209ENST00000462944 CFHR5Q9BXR6 569 aa11.86□□□□□ -0.51
MDH1-209ENST00000462944 POLLQ9UGP5 575 aa11.86□□□□□ -0.51
MDH1-209ENST00000462944 RTL9Q8NET4 1388 aa11.86□□□□□ -0.51
MDH1-209ENST00000462944 ZNF646O15015 1829 aaPredicted RBP11.86□□□□□ -0.51
MDH1-209ENST00000462944 TM4SF4P48230 202 aa11.85□□□□□ -0.51
MDH1-209ENST00000462944 RPS8P62241 208 aaKnown RBP11.85□□□□□ -0.51
MDH1-209ENST00000462944 SREBF2Q12772 1141 aa11.85□□□□□ -0.51
MDH1-209ENST00000462944 RBM26Q5T8P6 1007 aaKnown RBP11.85□□□□□ -0.51
MDH1-209ENST00000462944 TBC1D16Q8TBP0 767 aa11.85□□□□□ -0.51
MDH1-209ENST00000462944 SPEF2Q9C093 1822 aa11.84□□□□□ -0.51
MDH1-209ENST00000462944 RIMBP2O15034 1052 aa11.84□□□□□ -0.51
MDH1-209ENST00000462944 EGFRP00533 1210 aa11.84□□□□□ -0.51
MDH1-209ENST00000462944 NF2P35240 595 aa11.84□□□□□ -0.51
MDH1-209ENST00000462944 GPSM2P81274 684 aa11.84□□□□□ -0.51
MDH1-209ENST00000462944 AIMP1Q12904 312 aaKnown RBP11.84□□□□□ -0.51
MDH1-209ENST00000462944 TRIM28Q13263 835 aaKnown RBP11.84□□□□□ -0.51
MDH1-209ENST00000462944 PROSER3Q2NL68 480 aa11.84□□□□□ -0.51
MDH1-209ENST00000462944 INTS3Q68E01 1043 aaKnown RBP11.84□□□□□ -0.51
MDH1-209ENST00000462944 RSBN1LQ6PCB5 846 aaPredicted RBP11.84□□□□□ -0.51
MDH1-209ENST00000462944 ANKRD13DQ6ZTN6 518 aa11.84□□□□□ -0.51
MDH1-209ENST00000462944 FAM9BQ8IZU0 186 aa11.84□□□□□ -0.51
MDH1-209ENST00000462944 CELF1Q92879 486 aaKnown RBP11.84□□□□□ -0.51
MDH1-209ENST00000462944 CACNA1FO60840 1977 aa11.83□□□□□ -0.52
MDH1-209ENST00000462944 ALDH1A1P00352 501 aa11.83□□□□□ -0.52
MDH1-209ENST00000462944 USP17L8P0C7I0 530 aa11.83□□□□□ -0.52
MDH1-209ENST00000462944 SCARF1Q14162 830 aa11.83□□□□□ -0.52
MDH1-209ENST00000462944 ANGEL2Q5VTE6 544 aaKnown RBP11.83□□□□□ -0.52
MDH1-209ENST00000462944 PODNQ7Z5L7 613 aa11.83□□□□□ -0.52
MDH1-209ENST00000462944 ZNF296Q8WUU4 475 aaPredicted RBP11.83□□□□□ -0.52
MDH1-209ENST00000462944 ISCA1Q9BUE6 129 aa11.83□□□□□ -0.52
MDH1-209ENST00000462944 DBF4Q9UBU7 674 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms