RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 ZSCAN20P17040 1043 aaPredicted RBP4.12□□□□□ -1.75
COL8A1-204ENST00000462604 KCNA6P17658 529 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 FAM160A1Q05DH4 1040 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 PSME1Q06323 249 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 GABPB1Q06547 395 aaPredicted RBP4.12□□□□□ -1.75
COL8A1-204ENST00000462604 AIMP1Q12904 312 aaKnown RBP4.12□□□□□ -1.75
COL8A1-204ENST00000462604 LRMPQ12912 555 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 PTPN14Q15678 1187 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 ATP2B3Q16720 1220 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 PROSER3Q2NL68 480 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 LRRFIP1Q32MZ4 808 aaKnown RBP4.12□□□□□ -1.75
COL8A1-204ENST00000462604 MCMDC2Q4G0Z9 681 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 TNNI3KQ59H18 835 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 TAF3Q5VWG9 929 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 FAM173BQ6P4H8 233 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 SAMD1Q6SPF0 538 aaPredicted RBP4.12□□□□□ -1.75
COL8A1-204ENST00000462604 MPRIPQ6WCQ1 1025 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 Q6ZUG5 572 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 ZNF589Q86UQ0 364 aaPredicted RBP4.12□□□□□ -1.75
COL8A1-204ENST00000462604 CCAR1Q8IX12 1150 aaKnown RBP4.12□□□□□ -1.75
COL8A1-204ENST00000462604 CCDC150Q8NCX0 1101 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 ZNF397Q8NF99 534 aaPredicted RBP4.12□□□□□ -1.75
COL8A1-204ENST00000462604 SMARCC2Q8TAQ2 1214 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 ANKRD24Q8TF21 1146 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 JARID2Q92833 1246 aaPredicted RBP4.12□□□□□ -1.75
COL8A1-204ENST00000462604 TCEANC2Q96MN5 208 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 DNAJC2Q99543 621 aaKnown RBP4.12□□□□□ -1.75
COL8A1-204ENST00000462604 METTL22Q9BUU2 404 aaPredicted RBP4.12□□□□□ -1.75
COL8A1-204ENST00000462604 FPGT-TNNI3KV9GXZ4 949 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 RIMS1Q86UR5 1692 aaKnown RBP4.12□□□□□ -1.75
COL8A1-204ENST00000462604 COL15A1P39059 1388 aa4.12□□□□□ -1.75
COL8A1-204ENST00000462604 DLG5Q8TDM6 1919 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 USP54Q70EL1 1684 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 CCDC69A6NI79 296 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 NEURL1BA8MQ27 555 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 CCP110O43303 1012 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 DTNBO60941 627 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 TUBB4AP04350 444 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 IGKV5-2P06315 115 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 SKILP12757 684 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 U2AF2P26368 475 aaKnown RBP eCLIP4.11□□□□□ -1.75
COL8A1-204ENST00000462604 ME1P48163 572 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 CEBPAP49715 358 aaPredicted RBP4.11□□□□□ -1.75
COL8A1-204ENST00000462604 FOSBP53539 338 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 RBM6P78332 1123 aaKnown RBP4.11□□□□□ -1.75
COL8A1-204ENST00000462604 SCRN1Q12765 414 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 TFCP2Q12800 502 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 GCKRQ14397 625 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 IQCB1Q15051 598 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 SLFNL1Q499Z3 407 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 C11orf57Q6ZUT1 292 aaPredicted RBP4.11□□□□□ -1.75
COL8A1-204ENST00000462604 ZNF771Q7L3S4 317 aaPredicted RBP4.11□□□□□ -1.75
COL8A1-204ENST00000462604 DHX32Q7L7V1 743 aaKnown RBP4.11□□□□□ -1.75
COL8A1-204ENST00000462604 LRRC8AQ8IWT6 810 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 AOPEPQ8N6M6 819 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 FSIP1Q8NA03 581 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 NSUN7Q8NE18 718 aaKnown RBP4.11□□□□□ -1.75
COL8A1-204ENST00000462604 KIF18AQ8NI77 898 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 KCNG4Q8TDN1 519 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 XAGE3Q8WTP9 111 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 CACTINQ8WUQ7 758 aaKnown RBP4.11□□□□□ -1.75
COL8A1-204ENST00000462604 MRPS27Q92552 414 aaKnown RBP4.11□□□□□ -1.75
COL8A1-204ENST00000462604 ZNF592Q92610 1267 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 LRRC59Q96AG4 307 aaKnown RBP4.11□□□□□ -1.75
COL8A1-204ENST00000462604 DDX11Q96FC9 970 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 ERO1AQ96HE7 468 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 KAZALD1Q96I82 304 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 PGBD1Q96JS3 809 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 MYD88Q99836 296 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 HAUS7Q99871 368 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 DSCC1Q9BVC3 393 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 COPRSQ9NQ92 184 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 HELLSQ9NRZ9 838 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 KCND1Q9NSA2 647 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 IMPACTQ9P2X3 320 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 ZNF219Q9P2Y4 722 aaPredicted RBP4.11□□□□□ -1.75
COL8A1-204ENST00000462604 NRBP1Q9UHY1 535 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 RCOR1Q9UKL0 485 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 ZHX1Q9UKY1 873 aaPredicted RBP4.11□□□□□ -1.75
COL8A1-204ENST00000462604 NAP1L2Q9ULW6 460 aaPredicted RBP4.11□□□□□ -1.75
COL8A1-204ENST00000462604 TAF6LQ9Y6J9 622 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 SH3TC1Q8TE82 1336 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 N4BP2Q86UW6 1770 aaPredicted RBP4.11□□□□□ -1.75
COL8A1-204ENST00000462604 ZNF609O15014 1411 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 PXDNQ92626 1479 aa4.11□□□□□ -1.75
COL8A1-204ENST00000462604 FMN2Q9NZ56 1722 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 A0A1W2PQ27 194 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 A0A1W2PQ64 194 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 A0A1W2PQD8 194 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 CBFA2T2O43439 604 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 DHX16O60231 1041 aaKnown RBP4.1□□□□□ -1.75
COL8A1-204ENST00000462604 SMC2O95347 1197 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 SLU7O95391 586 aaKnown RBP4.1□□□□□ -1.75
COL8A1-204ENST00000462604 YEATS4O95619 227 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 GCP02774 474 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 MYL6BP14649 208 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 TATP17735 454 aaPredicted RBP4.1□□□□□ -1.75
COL8A1-204ENST00000462604 KCNJ6P48051 423 aa4.1□□□□□ -1.75
COL8A1-204ENST00000462604 CEBPZQ03701 1054 aaKnown RBP4.1□□□□□ -1.75
COL8A1-204ENST00000462604 APOBRQ0VD83 1088 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms