RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 CASC1Q6TDU7 716 aa18.28■□□□□ 0.52
RPRD1B-203ENST00000462548 ESYT1Q9BSJ8 1104 aa18.28■□□□□ 0.52
RPRD1B-203ENST00000462548 MSH5O43196 834 aa18.28■□□□□ 0.52
RPRD1B-203ENST00000462548 EN1Q05925 392 aaPredicted RBP18.28■□□□□ 0.52
RPRD1B-203ENST00000462548 EZH2Q15910 746 aaKnown RBP18.28■□□□□ 0.52
RPRD1B-203ENST00000462548 HELBQ8NG08 1087 aaPredicted RBP18.28■□□□□ 0.52
RPRD1B-203ENST00000462548 CAMKK2Q96RR4 588 aa18.27■□□□□ 0.52
RPRD1B-203ENST00000462548 RBM25P49756 843 aaKnown RBP18.27■□□□□ 0.51
RPRD1B-203ENST00000462548 DDR1Q08345 913 aa18.27■□□□□ 0.51
RPRD1B-203ENST00000462548 EVI5LQ96CN4 794 aa18.27■□□□□ 0.51
RPRD1B-203ENST00000462548 XAGE2Q96GT9 111 aa18.27■□□□□ 0.51
RPRD1B-203ENST00000462548 AKAP2Q9Y2D5 859 aa18.27■□□□□ 0.51
RPRD1B-203ENST00000462548 PDE8BO95263 885 aa18.26■□□□□ 0.51
RPRD1B-203ENST00000462548 ATP2B3Q16720 1220 aa18.26■□□□□ 0.51
RPRD1B-203ENST00000462548 PRR5LQ6MZQ0 368 aa18.26■□□□□ 0.51
RPRD1B-203ENST00000462548 MPHOSPH8Q99549 860 aa18.26■□□□□ 0.51
RPRD1B-203ENST00000462548 NLRP3Q96P20 1036 aa18.25■□□□□ 0.51
RPRD1B-203ENST00000462548 USP26Q9BXU7 913 aa18.25■□□□□ 0.51
RPRD1B-203ENST00000462548 MROH5Q6ZUA9 1318 aa18.25■□□□□ 0.51
RPRD1B-203ENST00000462548 SNAP23O00161 211 aa18.25■□□□□ 0.51
RPRD1B-203ENST00000462548 HMGB2P26583 209 aaKnown RBP18.25■□□□□ 0.51
RPRD1B-203ENST00000462548 IGHMBP2P38935 993 aaKnown RBP18.25■□□□□ 0.51
RPRD1B-203ENST00000462548 CNBD1Q8NA66 436 aa18.25■□□□□ 0.51
RPRD1B-203ENST00000462548 CELF1Q92879 486 aaKnown RBP18.25■□□□□ 0.51
RPRD1B-203ENST00000462548 HAUS7Q99871 368 aa18.25■□□□□ 0.51
RPRD1B-203ENST00000462548 ANO8Q9HCE9 1232 aaPredicted RBP18.25■□□□□ 0.51
RPRD1B-203ENST00000462548 PNPLA7Q6ZV29 1317 aa18.25■□□□□ 0.51
RPRD1B-203ENST00000462548 TAF5LO75529 589 aa18.24■□□□□ 0.51
RPRD1B-203ENST00000462548 SERPINB2P05120 415 aa18.24■□□□□ 0.51
RPRD1B-203ENST00000462548 FGFR2P21802 821 aa18.24■□□□□ 0.51
RPRD1B-203ENST00000462548 CDC5LQ99459 802 aaKnown RBP18.24■□□□□ 0.51
RPRD1B-203ENST00000462548 DNAJC2Q99543 621 aaKnown RBP18.24■□□□□ 0.51
RPRD1B-203ENST00000462548 KIF2CQ99661 725 aa18.23■□□□□ 0.51
RPRD1B-203ENST00000462548 POLRMTO00411 1230 aaKnown RBP18.23■□□□□ 0.51
RPRD1B-203ENST00000462548 NPHP1O15259 732 aa18.23■□□□□ 0.51
RPRD1B-203ENST00000462548 ANKRD18AQ8IVF6 992 aa18.23■□□□□ 0.51
RPRD1B-203ENST00000462548 A0A1B0GUL6 1792 aa18.23■□□□□ 0.51
RPRD1B-203ENST00000462548 CHRNDQ07001 517 aa18.22■□□□□ 0.51
RPRD1B-203ENST00000462548 SCARF1Q14162 830 aa18.22■□□□□ 0.51
RPRD1B-203ENST00000462548 CWC27Q6UX04 472 aaKnown RBP18.22■□□□□ 0.51
RPRD1B-203ENST00000462548 ARAP2Q8WZ64 1704 aa18.21■□□□□ 0.51
RPRD1B-203ENST00000462548 SGSM2O43147 1006 aa18.21■□□□□ 0.51
RPRD1B-203ENST00000462548 PUM3Q15397 648 aaKnown RBP18.21■□□□□ 0.51
RPRD1B-203ENST00000462548 DDX46Q7L014 1031 aaKnown RBP18.21■□□□□ 0.51
RPRD1B-203ENST00000462548 FSD1Q9BTV5 496 aa18.21■□□□□ 0.51
RPRD1B-203ENST00000462548 REC8O95072 547 aa18.21■□□□□ 0.51
RPRD1B-203ENST00000462548 CHGBP05060 677 aa18.21■□□□□ 0.51
RPRD1B-203ENST00000462548 IFIT1P09914 478 aaKnown RBP18.21■□□□□ 0.51
RPRD1B-203ENST00000462548 GORABQ5T7V8 394 aa18.21■□□□□ 0.51
RPRD1B-203ENST00000462548 DEFB132Q7Z7B7 95 aa18.21■□□□□ 0.51
RPRD1B-203ENST00000462548 BSDC1Q9NW68 430 aaPredicted RBP18.21■□□□□ 0.51
RPRD1B-203ENST00000462548 WTIPA6NIX2 430 aaPredicted RBP18.2■□□□□ 0.5
RPRD1B-203ENST00000462548 CCDC158Q5M9N0 1113 aa18.2■□□□□ 0.5
RPRD1B-203ENST00000462548 TTC39AQ5SRH9 613 aa18.2■□□□□ 0.5
RPRD1B-203ENST00000462548 DDRGK1Q96HY6 314 aa18.2■□□□□ 0.5
RPRD1B-203ENST00000462548 FAM227BQ96M60 508 aa18.2■□□□□ 0.5
RPRD1B-203ENST00000462548 DIAPH3Q9NSV4 1193 aa18.2■□□□□ 0.5
RPRD1B-203ENST00000462548 SLC4A3P48751 1232 aa18.2■□□□□ 0.5
RPRD1B-203ENST00000462548 NMIQ13287 307 aaPredicted RBP18.2■□□□□ 0.5
RPRD1B-203ENST00000462548 SLC51AQ86UW1 340 aa18.2■□□□□ 0.5
RPRD1B-203ENST00000462548 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.2■□□□□ 0.5
RPRD1B-203ENST00000462548 LPIN2Q92539 896 aa18.2■□□□□ 0.5
RPRD1B-203ENST00000462548 GOLIM4O00461 696 aa18.19■□□□□ 0.5
RPRD1B-203ENST00000462548 EIF5BO60841 1220 aaKnown RBP18.19■□□□□ 0.5
RPRD1B-203ENST00000462548 FLAD1Q8NFF5 587 aa18.19■□□□□ 0.5
RPRD1B-203ENST00000462548 ANTXR1Q9H6X2 564 aa18.19■□□□□ 0.5
RPRD1B-203ENST00000462548 ANO2Q9NQ90 1003 aa18.19■□□□□ 0.5
RPRD1B-203ENST00000462548 SNRKQ9NRH2 765 aa18.19■□□□□ 0.5
RPRD1B-203ENST00000462548 PAG1Q9NWQ8 432 aa18.19■□□□□ 0.5
RPRD1B-203ENST00000462548 PHKA1P46020 1223 aa18.19■□□□□ 0.5
RPRD1B-203ENST00000462548 RPS8P62241 208 aaKnown RBP18.19■□□□□ 0.5
RPRD1B-203ENST00000462548 SLC15A2Q16348 729 aa18.19■□□□□ 0.5
RPRD1B-203ENST00000462548 PI16Q6UXB8 463 aa18.19■□□□□ 0.5
RPRD1B-203ENST00000462548 MINPP1Q9UNW1 487 aa18.19■□□□□ 0.5
RPRD1B-203ENST00000462548 AKAP11Q9UKA4 1901 aa18.18■□□□□ 0.5
RPRD1B-203ENST00000462548 A0A0D9SFI3 127 aa18.18■□□□□ 0.5
RPRD1B-203ENST00000462548 CCDC102BQ68D86 513 aa18.18■□□□□ 0.5
RPRD1B-203ENST00000462548 NLGN1Q8N2Q7 840 aa18.18■□□□□ 0.5
RPRD1B-203ENST00000462548 MCAMP43121 646 aa18.17■□□□□ 0.5
RPRD1B-203ENST00000462548 ST5P78524 1137 aa18.17■□□□□ 0.5
RPRD1B-203ENST00000462548 MSL1Q68DK7 614 aa18.17■□□□□ 0.5
RPRD1B-203ENST00000462548 KBTBD3Q8NAB2 608 aa18.17■□□□□ 0.5
RPRD1B-203ENST00000462548 NRXN2Q9P2S2 1712 aa18.17■□□□□ 0.5
RPRD1B-203ENST00000462548 SLC5A1P13866 664 aa18.17■□□□□ 0.5
RPRD1B-203ENST00000462548 SLFNL1Q499Z3 407 aa18.17■□□□□ 0.5
RPRD1B-203ENST00000462548 LSG1Q9H089 658 aaKnown RBP18.17■□□□□ 0.5
RPRD1B-203ENST00000462548 ZAP70P43403 619 aa18.16■□□□□ 0.5
RPRD1B-203ENST00000462548 FKBP4Q02790 459 aaKnown RBP eCLIP18.16■□□□□ 0.5
RPRD1B-203ENST00000462548 CRY2Q49AN0 593 aa18.16■□□□□ 0.5
RPRD1B-203ENST00000462548 ANKRD31Q8N7Z5 1873 aa18.16■□□□□ 0.5
RPRD1B-203ENST00000462548 ZNF512BQ96KM6 892 aaPredicted RBP18.15■□□□□ 0.5
RPRD1B-203ENST00000462548 RFX7Q2KHR2 1363 aa18.15■□□□□ 0.5
RPRD1B-203ENST00000462548 HIP1O00291 1037 aa18.15■□□□□ 0.5
RPRD1B-203ENST00000462548 BAG6P46379 1132 aa18.15■□□□□ 0.5
RPRD1B-203ENST00000462548 RUFY2Q8WXA3 655 aa18.15■□□□□ 0.5
RPRD1B-203ENST00000462548 STK32BQ9NY57 414 aa18.15■□□□□ 0.5
RPRD1B-203ENST00000462548 MMP10P09238 476 aa18.14■□□□□ 0.5
RPRD1B-203ENST00000462548 ARID4AP29374 1257 aaPredicted RBP18.14■□□□□ 0.5
RPRD1B-203ENST00000462548 SF3B2Q13435 895 aaKnown RBP18.14■□□□□ 0.5
RPRD1B-203ENST00000462548 GRAPQ13588 217 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms