RNA–Protein interactions for RNA: ENST00000462451.1

VAMP5-202, Transcript of vesicle associated membrane protein 5, humanhuman

TSL 2

Gene VAMP5, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP5-202ENST00000462451 TAF1P21675 1872 aa15.19■□□□□ 0.02
VAMP5-202ENST00000462451 RPS8P62241 208 aaKnown RBP15.19■□□□□ 0.02
VAMP5-202ENST00000462451 LMOD3Q0VAK6 560 aa15.19■□□□□ 0.02
VAMP5-202ENST00000462451 KIF4BQ2VIQ3 1234 aa15.19■□□□□ 0.02
VAMP5-202ENST00000462451 EYA3Q99504 573 aa15.19■□□□□ 0.02
VAMP5-202ENST00000462451 IRS4O14654 1257 aaPredicted RBP15.18■□□□□ 0.02
VAMP5-202ENST00000462451 SLC10A3P09131 477 aa15.18■□□□□ 0.02
VAMP5-202ENST00000462451 SOX10P56693 466 aa15.18■□□□□ 0.02
VAMP5-202ENST00000462451 NEUROD2Q15784 382 aa15.18■□□□□ 0.02
VAMP5-202ENST00000462451 SULF1Q8IWU6 871 aa15.18■□□□□ 0.02
VAMP5-202ENST00000462451 ZC3H12CQ9C0D7 883 aaKnown RBP15.18■□□□□ 0.02
VAMP5-202ENST00000462451 GGA3Q9NZ52 723 aa15.18■□□□□ 0.02
VAMP5-202ENST00000462451 LAS1LQ9Y4W2 734 aaKnown RBP15.18■□□□□ 0.02
VAMP5-202ENST00000462451 COL4A1P02462 1669 aa15.17■□□□□ 0.02
VAMP5-202ENST00000462451 TRIM28Q13263 835 aaKnown RBP15.17■□□□□ 0.02
VAMP5-202ENST00000462451 HDGFL1Q5TGJ6 251 aa15.17■□□□□ 0.02
VAMP5-202ENST00000462451 CDCA5Q96FF9 252 aa15.17■□□□□ 0.02
VAMP5-202ENST00000462451 PODXL2Q9NZ53 605 aa15.17■□□□□ 0.02
VAMP5-202ENST00000462451 DBF4Q9UBU7 674 aaPredicted RBP15.17■□□□□ 0.02
VAMP5-202ENST00000462451 ZNF280AP59817 542 aaPredicted RBP15.16■□□□□ 0.02
VAMP5-202ENST00000462451 SCARF1Q14162 830 aa15.16■□□□□ 0.02
VAMP5-202ENST00000462451 CCDC146Q8IYE0 955 aa15.16■□□□□ 0.02
VAMP5-202ENST00000462451 SEC31BQ9NQW1 1179 aa15.16■□□□□ 0.02
VAMP5-202ENST00000462451 TRIM35Q9UPQ4 493 aa15.16■□□□□ 0.02
VAMP5-202ENST00000462451 LRRC37AA6NMS7 1700 aa15.16■□□□□ 0.02
VAMP5-202ENST00000462451 ANGEL2Q5VTE6 544 aaKnown RBP15.15■□□□□ 0.02
VAMP5-202ENST00000462451 G3V3G9 751 aa15.14■□□□□ 0.01
VAMP5-202ENST00000462451 UFL1O94874 794 aa15.14■□□□□ 0.01
VAMP5-202ENST00000462451 HOXB7P09629 217 aa15.14■□□□□ 0.01
VAMP5-202ENST00000462451 DCAF8Q5TAQ9 597 aa15.14■□□□□ 0.01
VAMP5-202ENST00000462451 RSBN1LQ6PCB5 846 aaPredicted RBP15.14■□□□□ 0.01
VAMP5-202ENST00000462451 CTU1Q7Z7A3 348 aaKnown RBP15.14■□□□□ 0.01
VAMP5-202ENST00000462451 RASAL3Q86YV0 1011 aa15.14■□□□□ 0.01
VAMP5-202ENST00000462451 HYPKQ9NX55 129 aa15.14■□□□□ 0.01
VAMP5-202ENST00000462451 ANKIB1Q9P2G1 1089 aa15.14■□□□□ 0.01
VAMP5-202ENST00000462451 PDE4DIPQ5VU43 2346 aa15.14■□□□□ 0.01
VAMP5-202ENST00000462451 POLR2AP24928 1970 aaKnown RBP15.13■□□□□ 0.01
VAMP5-202ENST00000462451 DDX60Q8IY21 1712 aaKnown RBP15.13■□□□□ 0.01
VAMP5-202ENST00000462451 REM2Q8IYK8 340 aaPredicted RBP15.13■□□□□ 0.01
VAMP5-202ENST00000462451 ZBTB38Q8NAP3 1195 aaPredicted RBP15.13■□□□□ 0.01
VAMP5-202ENST00000462451 AGBL3Q8NEM8 1001 aa15.13■□□□□ 0.01
VAMP5-202ENST00000462451 GMLQ99445 158 aa15.13■□□□□ 0.01
VAMP5-202ENST00000462451 GGA1Q9UJY5 639 aa15.13■□□□□ 0.01
VAMP5-202ENST00000462451 FKBP1BP68106 108 aa15.12■□□□□ 0.01
VAMP5-202ENST00000462451 DUSP27Q5VZP5 1158 aa15.12■□□□□ 0.01
VAMP5-202ENST00000462451 MOB2Q70IA6 237 aa15.12■□□□□ 0.01
VAMP5-202ENST00000462451 SCAF8Q9UPN6 1271 aaKnown RBP15.12■□□□□ 0.01
VAMP5-202ENST00000462451 USP17L8P0C7I0 530 aa15.11■□□□□ 0.01
VAMP5-202ENST00000462451 RALBP1Q15311 655 aa15.11■□□□□ 0.01
VAMP5-202ENST00000462451 RIC3Q7Z5B4 369 aa15.11■□□□□ 0.01
VAMP5-202ENST00000462451 JARID2Q92833 1246 aaPredicted RBP15.11■□□□□ 0.01
VAMP5-202ENST00000462451 MYOZ2Q9NPC6 264 aa15.11■□□□□ 0.01
VAMP5-202ENST00000462451 HPS5Q9UPZ3 1129 aa15.11■□□□□ 0.01
VAMP5-202ENST00000462451 WTIPA6NIX2 430 aaPredicted RBP15.1■□□□□ 0.01
VAMP5-202ENST00000462451 UBE2Q2LH0YL09 131 aa15.1■□□□□ 0.01
VAMP5-202ENST00000462451 TBC1D8O95759 1140 aa15.1■□□□□ 0.01
VAMP5-202ENST00000462451 PRAMEF18Q5VWM3 479 aa15.1■□□□□ 0.01
VAMP5-202ENST00000462451 RUNDC1Q96C34 613 aa15.1■□□□□ 0.01
VAMP5-202ENST00000462451 CCDC85AQ96PX6 553 aaPredicted RBP15.1■□□□□ 0.01
VAMP5-202ENST00000462451 PHAXQ9H814 394 aaKnown RBP15.1■□□□□ 0.01
VAMP5-202ENST00000462451 ZNF609O15014 1411 aa15.09■□□□□ 0.01
VAMP5-202ENST00000462451 SCN9AQ15858 1988 aa15.09■□□□□ 0.01
VAMP5-202ENST00000462451 USP17L3A6NCW0 530 aa15.09■□□□□ 0.01
VAMP5-202ENST00000462451 USP17L4A6NCW7 530 aa15.09■□□□□ 0.01
VAMP5-202ENST00000462451 HSP90B1P14625 803 aaKnown RBP15.09■□□□□ 0.01
VAMP5-202ENST00000462451 CCDC152Q4G0S7 254 aa15.09■□□□□ 0.01
VAMP5-202ENST00000462451 USP17L1Q7RTZ2 530 aa15.09■□□□□ 0.01
VAMP5-202ENST00000462451 ZNF296Q8WUU4 475 aaPredicted RBP15.09■□□□□ 0.01
VAMP5-202ENST00000462451 MYD88Q99836 296 aa15.09■□□□□ 0.01
VAMP5-202ENST00000462451 PITPNM2Q9BZ72 1349 aa15.09■□□□□ 0.01
VAMP5-202ENST00000462451 PDE8AO60658 829 aa15.08■□□□□ 0
VAMP5-202ENST00000462451 PCCAP05165 728 aaPredicted RBP15.08■□□□□ 0
VAMP5-202ENST00000462451 GOLGA2Q08379 1002 aa15.08■□□□□ 0
VAMP5-202ENST00000462451 PKN2Q16513 984 aaKnown RBP15.08■□□□□ 0
VAMP5-202ENST00000462451 NBPF9Q3BBW0 867 aa15.08■□□□□ 0
VAMP5-202ENST00000462451 PRPF38BQ5VTL8 546 aaKnown RBP15.08■□□□□ 0
VAMP5-202ENST00000462451 PODNQ7Z5L7 613 aa15.08■□□□□ 0
VAMP5-202ENST00000462451 CCDC191Q8NCU4 936 aa15.08■□□□□ 0
VAMP5-202ENST00000462451 MBIPQ9NS73 344 aa15.08■□□□□ 0
VAMP5-202ENST00000462451 XDHP47989 1333 aa15.08■□□□□ 0
VAMP5-202ENST00000462451 ATP2B4P23634 1241 aa15.07■□□□□ 0
VAMP5-202ENST00000462451 TM4SF4P48230 202 aa15.07■□□□□ 0
VAMP5-202ENST00000462451 ANKRD18AQ8IVF6 992 aa15.07■□□□□ 0
VAMP5-202ENST00000462451 MXD3Q9BW11 206 aa15.07■□□□□ 0
VAMP5-202ENST00000462451 HDAC9Q9UKV0 1011 aa15.07■□□□□ 0
VAMP5-202ENST00000462451 ADAMTS8Q9UP79 889 aa15.07■□□□□ 0
VAMP5-202ENST00000462451 ELL2O00472 640 aaPredicted RBP15.06■□□□□ 0
VAMP5-202ENST00000462451 ZNF853P0CG23 659 aa15.06■□□□□ 0
VAMP5-202ENST00000462451 CWC25Q9NXE8 425 aaPredicted RBP15.06■□□□□ 0
VAMP5-202ENST00000462451 METTL22Q9BUU2 404 aaPredicted RBP15.05■□□□□ -0
VAMP5-202ENST00000462451 AKAP11Q9UKA4 1901 aa15.04■□□□□ -0
VAMP5-202ENST00000462451 GPR25O00155 361 aa15.04■□□□□ -0
VAMP5-202ENST00000462451 WNT10BO00744 389 aa15.04■□□□□ -0
VAMP5-202ENST00000462451 MKRN3Q13064 507 aaKnown RBP15.04■□□□□ -0
VAMP5-202ENST00000462451 TTLL12Q14166 644 aaPredicted RBP15.04■□□□□ -0
VAMP5-202ENST00000462451 WDR43Q15061 677 aaKnown RBP eCLIP15.04■□□□□ -0
VAMP5-202ENST00000462451 DACT2Q5SW24 774 aa15.04■□□□□ -0
VAMP5-202ENST00000462451 MINPP1Q9UNW1 487 aa15.04■□□□□ -0
VAMP5-202ENST00000462451 PAPPA2Q9BXP8 1791 aa15.03■□□□□ -0
VAMP5-202ENST00000462451 MYBBP1AQ9BQG0 1328 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms