RNA–Protein interactions for RNA: ENST00000461934.5

UBA3-205, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,224 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-205ENST00000461934 ZNF316A6NFI3 1004 aaPredicted RBP16.97■□□□□ 0.31
UBA3-205ENST00000461934 YDJCA8MPS7 323 aa16.97■□□□□ 0.31
UBA3-205ENST00000461934 ECE2O60344 883 aa16.97■□□□□ 0.31
UBA3-205ENST00000461934 CAPN15O75808 1086 aa16.97■□□□□ 0.31
UBA3-205ENST00000461934 UFL1O94874 794 aa16.97■□□□□ 0.31
UBA3-205ENST00000461934 MICALL2Q8IY33 904 aa16.97■□□□□ 0.31
UBA3-205ENST00000461934 PI4KAP1Q8N8J0 262 aa16.97■□□□□ 0.31
UBA3-205ENST00000461934 JARID2Q92833 1246 aaPredicted RBP16.97■□□□□ 0.31
UBA3-205ENST00000461934 SEC31BQ9NQW1 1179 aa16.97■□□□□ 0.31
UBA3-205ENST00000461934 POLLQ9UGP5 575 aa16.97■□□□□ 0.31
UBA3-205ENST00000461934 GGA1Q9UJY5 639 aa16.97■□□□□ 0.31
UBA3-205ENST00000461934 AKAP11Q9UKA4 1901 aa16.97■□□□□ 0.31
UBA3-205ENST00000461934 THSD7BQ9C0I4 1608 aa16.96■□□□□ 0.31
UBA3-205ENST00000461934 TRAF5O00463 557 aa16.96■□□□□ 0.31
UBA3-205ENST00000461934 PSMD14O00487 310 aa16.96■□□□□ 0.31
UBA3-205ENST00000461934 CTCFP49711 727 aaPredicted RBP16.96■□□□□ 0.31
UBA3-205ENST00000461934 DOK7Q18PE1 504 aa16.96■□□□□ 0.31
UBA3-205ENST00000461934 TBC1D16Q8TBP0 767 aa16.96■□□□□ 0.31
UBA3-205ENST00000461934 CDC5LQ99459 802 aaKnown RBP16.96■□□□□ 0.31
UBA3-205ENST00000461934 BEGAINQ9BUH8 593 aa16.96■□□□□ 0.31
UBA3-205ENST00000461934 ZNF408Q9H9D4 720 aa16.96■□□□□ 0.31
UBA3-205ENST00000461934 SALL2Q9Y467 1007 aaPredicted RBP16.96■□□□□ 0.31
UBA3-205ENST00000461934 IL16Q14005 1332 aa16.96■□□□□ 0.3
UBA3-205ENST00000461934 FOXN1O15353 648 aa16.95■□□□□ 0.3
UBA3-205ENST00000461934 SLC4A2P04920 1241 aa16.95■□□□□ 0.3
UBA3-205ENST00000461934 MAP2K1Q02750 393 aaPredicted RBP16.95■□□□□ 0.3
UBA3-205ENST00000461934 FMR1Q06787 632 aaKnown RBP eCLIP16.95■□□□□ 0.3
UBA3-205ENST00000461934 ZC3H15Q8WU90 426 aaKnown RBP16.95■□□□□ 0.3
UBA3-205ENST00000461934 ZBTB12Q9Y330 459 aaPredicted RBP16.95■□□□□ 0.3
UBA3-205ENST00000461934 CELF2O95319 508 aaKnown RBP16.94■□□□□ 0.3
UBA3-205ENST00000461934 RPS12P25398 132 aaKnown RBP16.94■□□□□ 0.3
UBA3-205ENST00000461934 CDC37L1Q7L3B6 337 aa16.94■□□□□ 0.3
UBA3-205ENST00000461934 DPF2Q92785 391 aa16.94■□□□□ 0.3
UBA3-205ENST00000461934 GLIS2Q9BZE0 524 aaPredicted RBP16.94■□□□□ 0.3
UBA3-205ENST00000461934 PODXL2Q9NZ53 605 aa16.94■□□□□ 0.3
UBA3-205ENST00000461934 A0A1B0GUL6 1792 aa16.93■□□□□ 0.3
UBA3-205ENST00000461934 CTSWP56202 376 aa16.93■□□□□ 0.3
UBA3-205ENST00000461934 TRPM4Q8TD43 1214 aa16.93■□□□□ 0.3
UBA3-205ENST00000461934 CAPNS2Q96L46 248 aa16.93■□□□□ 0.3
UBA3-205ENST00000461934 GPR101Q96P66 508 aaPredicted RBP16.93■□□□□ 0.3
UBA3-205ENST00000461934 TLL2Q9Y6L7 1015 aa16.93■□□□□ 0.3
UBA3-205ENST00000461934 XDHP47989 1333 aa16.93■□□□□ 0.3
UBA3-205ENST00000461934 ATP2B4P23634 1241 aa16.92■□□□□ 0.3
UBA3-205ENST00000461934 FKBP5Q13451 457 aaPredicted RBP16.92■□□□□ 0.3
UBA3-205ENST00000461934 CWF19L2Q2TBE0 894 aaKnown RBP16.92■□□□□ 0.3
UBA3-205ENST00000461934 NCBP3Q53F19 620 aaKnown RBP16.92■□□□□ 0.3
UBA3-205ENST00000461934 RBM26Q5T8P6 1007 aaKnown RBP16.92■□□□□ 0.3
UBA3-205ENST00000461934 CST9Q5W186 159 aa16.92■□□□□ 0.3
UBA3-205ENST00000461934 CYP4F22Q6NT55 531 aa16.92■□□□□ 0.3
UBA3-205ENST00000461934 MYH16Q9H6N6 1097 aa16.92■□□□□ 0.3
UBA3-205ENST00000461934 PRDM10Q9NQV6 1147 aa16.92■□□□□ 0.3
UBA3-205ENST00000461934 SHTN1A0MZ66 631 aa16.91■□□□□ 0.3
UBA3-205ENST00000461934 NEURL1BA8MQ27 555 aa16.91■□□□□ 0.3
UBA3-205ENST00000461934 IGKV5-2P06315 115 aa16.91■□□□□ 0.3
UBA3-205ENST00000461934 TBC1D10BQ4KMP7 808 aaPredicted RBP16.91■□□□□ 0.3
UBA3-205ENST00000461934 SAMD7Q7Z3H4 446 aa16.91■□□□□ 0.3
UBA3-205ENST00000461934 DCPSQ96C86 337 aaKnown RBP16.91■□□□□ 0.3
UBA3-205ENST00000461934 WBP1LQ9NX94 342 aa16.91■□□□□ 0.3
UBA3-205ENST00000461934 PGAP2Q9UHJ9 254 aa16.91■□□□□ 0.3
UBA3-205ENST00000461934 FANCIQ9NVI1 1328 aa16.91■□□□□ 0.3
UBA3-205ENST00000461934 IGHMBP2P38935 993 aaKnown RBP16.9■□□□□ 0.3
UBA3-205ENST00000461934 HIRAP54198 1017 aaPredicted RBP16.9■□□□□ 0.3
UBA3-205ENST00000461934 FLIIQ13045 1269 aa16.9■□□□□ 0.3
UBA3-205ENST00000461934 G2E3Q7L622 706 aa16.9■□□□□ 0.3
UBA3-205ENST00000461934 UBE3BQ7Z3V4 1068 aa16.9■□□□□ 0.3
UBA3-205ENST00000461934 WDR63Q8IWG1 891 aa16.9■□□□□ 0.3
UBA3-205ENST00000461934 ECM29Q5VYK3 1845 aa16.9■□□□□ 0.3
UBA3-205ENST00000461934 ZNF646O15015 1829 aaPredicted RBP16.89■□□□□ 0.29
UBA3-205ENST00000461934 LBX1P52954 281 aa16.89■□□□□ 0.29
UBA3-205ENST00000461934 KIF4BQ2VIQ3 1234 aa16.89■□□□□ 0.29
UBA3-205ENST00000461934 USP48Q86UV5 1035 aa16.89■□□□□ 0.29
UBA3-205ENST00000461934 TTLL11Q8NHH1 800 aa16.89■□□□□ 0.29
UBA3-205ENST00000461934 KCNQ5Q9NR82 932 aa16.89■□□□□ 0.29
UBA3-205ENST00000461934 CASP8AP2Q9UKL3 1982 aa16.89■□□□□ 0.29
UBA3-205ENST00000461934 RTL9Q8NET4 1388 aa16.89■□□□□ 0.29
UBA3-205ENST00000461934 VIL1P09327 827 aaKnown RBP16.88■□□□□ 0.29
UBA3-205ENST00000461934 KRT26Q7Z3Y9 468 aa16.88■□□□□ 0.29
UBA3-205ENST00000461934 SAPCD2Q86UD0 394 aa16.88■□□□□ 0.29
UBA3-205ENST00000461934 FAM9BQ8IZU0 186 aa16.88■□□□□ 0.29
UBA3-205ENST00000461934 DNAAF4Q8WXU2 420 aa16.88■□□□□ 0.29
UBA3-205ENST00000461934 GREM2Q9H772 168 aa16.88■□□□□ 0.29
UBA3-205ENST00000461934 EXOSC9Q06265 439 aaKnown RBP16.87■□□□□ 0.29
UBA3-205ENST00000461934 AGBL3Q8NEM8 1001 aa16.87■□□□□ 0.29
UBA3-205ENST00000461934 FBXW7Q969H0 707 aa16.87■□□□□ 0.29
UBA3-205ENST00000461934 HHIPL1Q96JK4 782 aa16.87■□□□□ 0.29
UBA3-205ENST00000461934 MPHOSPH8Q99549 860 aa16.87■□□□□ 0.29
UBA3-205ENST00000461934 BSDC1Q9NW68 430 aaPredicted RBP16.87■□□□□ 0.29
UBA3-205ENST00000461934 H7C1W4 665 aa16.86■□□□□ 0.29
UBA3-205ENST00000461934 MAP2K2P36507 400 aa16.86■□□□□ 0.29
UBA3-205ENST00000461934 GCKRQ14397 625 aa16.86■□□□□ 0.29
UBA3-205ENST00000461934 RSBN1LQ6PCB5 846 aaPredicted RBP16.86■□□□□ 0.29
UBA3-205ENST00000461934 PODNQ7Z5L7 613 aa16.86■□□□□ 0.29
UBA3-205ENST00000461934 SULF1Q8IWU6 871 aa16.86■□□□□ 0.29
UBA3-205ENST00000461934 MED23Q9ULK4 1368 aa16.86■□□□□ 0.29
UBA3-205ENST00000461934 USP17L3A6NCW0 530 aa16.85■□□□□ 0.29
UBA3-205ENST00000461934 USP17L4A6NCW7 530 aa16.85■□□□□ 0.29
UBA3-205ENST00000461934 VAMP4O75379 141 aa16.85■□□□□ 0.29
UBA3-205ENST00000461934 HSPA8P11142 646 aaKnown RBP16.85■□□□□ 0.29
UBA3-205ENST00000461934 KCNJ4P48050 445 aa16.85■□□□□ 0.29
UBA3-205ENST00000461934 CCT4P50991 539 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms