RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 BEGAINQ9BUH8 593 aa11.27□□□□□ -0.61
LDB1-203ENST00000461873 SEC31BQ9NQW1 1179 aa11.27□□□□□ -0.61
LDB1-203ENST00000461873 CNOT7Q9UIV1 285 aaKnown RBP11.27□□□□□ -0.61
LDB1-203ENST00000461873 CHMP3Q9Y3E7 222 aa11.27□□□□□ -0.61
LDB1-203ENST00000461873 XDHP47989 1333 aa11.27□□□□□ -0.61
LDB1-203ENST00000461873 NEURL1BA8MQ27 555 aa11.26□□□□□ -0.61
LDB1-203ENST00000461873 RPS12P25398 132 aaKnown RBP11.26□□□□□ -0.61
LDB1-203ENST00000461873 ECE1P42892 770 aa11.26□□□□□ -0.61
LDB1-203ENST00000461873 GRM1Q13255 1194 aa11.26□□□□□ -0.61
LDB1-203ENST00000461873 CWF19L2Q2TBE0 894 aaKnown RBP11.26□□□□□ -0.61
LDB1-203ENST00000461873 TAF7LQ5H9L4 462 aa11.26□□□□□ -0.61
LDB1-203ENST00000461873 FBXW7Q969H0 707 aa11.26□□□□□ -0.61
LDB1-203ENST00000461873 PASKQ96RG2 1323 aa11.26□□□□□ -0.61
LDB1-203ENST00000461873 SNED1Q8TER0 1413 aa11.26□□□□□ -0.61
LDB1-203ENST00000461873 VAMP4O75379 141 aa11.25□□□□□ -0.61
LDB1-203ENST00000461873 ITGBL1O95965 494 aaPredicted RBP11.25□□□□□ -0.61
LDB1-203ENST00000461873 HSPA1AP0DMV8 641 aaKnown RBP11.25□□□□□ -0.61
LDB1-203ENST00000461873 HSPA1BP0DMV9 641 aaKnown RBP11.25□□□□□ -0.61
LDB1-203ENST00000461873 RBM26Q5T8P6 1007 aaKnown RBP11.25□□□□□ -0.61
LDB1-203ENST00000461873 IFFO2Q5TF58 517 aa11.25□□□□□ -0.61
LDB1-203ENST00000461873 SLC4A10Q6U841 1118 aa11.25□□□□□ -0.61
LDB1-203ENST00000461873 CDC37L1Q7L3B6 337 aa11.25□□□□□ -0.61
LDB1-203ENST00000461873 MICALL2Q8IY33 904 aa11.25□□□□□ -0.61
LDB1-203ENST00000461873 LINS1Q8NG48 757 aa11.25□□□□□ -0.61
LDB1-203ENST00000461873 ZC3H15Q8WU90 426 aaKnown RBP11.25□□□□□ -0.61
LDB1-203ENST00000461873 DCPSQ96C86 337 aaKnown RBP11.25□□□□□ -0.61
LDB1-203ENST00000461873 ANKRD2Q9GZV1 360 aa11.25□□□□□ -0.61
LDB1-203ENST00000461873 ZNF408Q9H9D4 720 aa11.25□□□□□ -0.61
LDB1-203ENST00000461873 PODXL2Q9NZ53 605 aa11.25□□□□□ -0.61
LDB1-203ENST00000461873 C9orf78Q9NZ63 289 aaPredicted RBP11.25□□□□□ -0.61
LDB1-203ENST00000461873 POLLQ9UGP5 575 aa11.25□□□□□ -0.61
LDB1-203ENST00000461873 ANKRD18BA2A2Z9 1011 aa11.24□□□□□ -0.61
LDB1-203ENST00000461873 PSMD14O00487 310 aa11.24□□□□□ -0.61
LDB1-203ENST00000461873 IGKV5-2P06315 115 aa11.24□□□□□ -0.61
LDB1-203ENST00000461873 GCKRQ14397 625 aa11.24□□□□□ -0.61
LDB1-203ENST00000461873 G2E3Q7L622 706 aa11.24□□□□□ -0.61
LDB1-203ENST00000461873 SLC51AQ86UW1 340 aa11.24□□□□□ -0.61
LDB1-203ENST00000461873 DPF2Q92785 391 aa11.24□□□□□ -0.61
LDB1-203ENST00000461873 BSDC1Q9NW68 430 aaPredicted RBP11.24□□□□□ -0.61
LDB1-203ENST00000461873 MYH3P11055 1940 aa11.24□□□□□ -0.61
LDB1-203ENST00000461873 CNTNAP1P78357 1384 aa11.24□□□□□ -0.61
LDB1-203ENST00000461873 CELF2O95319 508 aaKnown RBP11.23□□□□□ -0.61
LDB1-203ENST00000461873 MAP2K1Q02750 393 aaPredicted RBP11.23□□□□□ -0.61
LDB1-203ENST00000461873 IFIT5Q13325 482 aaKnown RBP11.23□□□□□ -0.61
LDB1-203ENST00000461873 CCDC57Q2TAC2 916 aa11.23□□□□□ -0.61
LDB1-203ENST00000461873 OGFOD1Q8N543 542 aa11.23□□□□□ -0.61
LDB1-203ENST00000461873 TTLL11Q8NHH1 800 aa11.23□□□□□ -0.61
LDB1-203ENST00000461873 GREM2Q9H772 168 aa11.23□□□□□ -0.61
LDB1-203ENST00000461873 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
LDB1-203ENST00000461873 LRRC37AA6NMS7 1700 aa11.22□□□□□ -0.61
LDB1-203ENST00000461873 YDJCA8MPS7 323 aa11.22□□□□□ -0.61
LDB1-203ENST00000461873 H7C1W4 665 aa11.22□□□□□ -0.61
LDB1-203ENST00000461873 ITGA6P23229 1130 aa11.22□□□□□ -0.61
LDB1-203ENST00000461873 COL4A5P29400 1685 aa11.22□□□□□ -0.61
LDB1-203ENST00000461873 VEGFBP49765 207 aa11.22□□□□□ -0.61
LDB1-203ENST00000461873 TBC1D10BQ4KMP7 808 aaPredicted RBP11.22□□□□□ -0.61
LDB1-203ENST00000461873 DIEXFQ68CQ4 756 aaKnown RBP11.22□□□□□ -0.61
LDB1-203ENST00000461873 PODNQ7Z5L7 613 aa11.22□□□□□ -0.61
LDB1-203ENST00000461873 SULF1Q8IWU6 871 aa11.22□□□□□ -0.61
LDB1-203ENST00000461873 GPR101Q96P66 508 aaPredicted RBP11.22□□□□□ -0.61
LDB1-203ENST00000461873 LEMD3Q9Y2U8 911 aa11.22□□□□□ -0.61
LDB1-203ENST00000461873 WDR33Q9C0J8 1336 aaKnown RBP11.21□□□□□ -0.61
LDB1-203ENST00000461873 USP17L3A6NCW0 530 aa11.21□□□□□ -0.61
LDB1-203ENST00000461873 USP17L4A6NCW7 530 aa11.21□□□□□ -0.61
LDB1-203ENST00000461873 E9PSI1 815 aa11.21□□□□□ -0.61
LDB1-203ENST00000461873 CCT4P50991 539 aaKnown RBP11.21□□□□□ -0.61
LDB1-203ENST00000461873 USP17L1Q7RTZ2 530 aa11.21□□□□□ -0.61
LDB1-203ENST00000461873 TNS4Q8IZW8 715 aa11.21□□□□□ -0.61
LDB1-203ENST00000461873 AGBL3Q8NEM8 1001 aa11.21□□□□□ -0.61
LDB1-203ENST00000461873 SRCIN1Q9C0H9 1055 aa11.21□□□□□ -0.61
LDB1-203ENST00000461873 MINPP1Q9UNW1 487 aa11.21□□□□□ -0.61
LDB1-203ENST00000461873 TRPM7Q96QT4 1865 aa11.21□□□□□ -0.62
LDB1-203ENST00000461873 RASSF10A6NK89 507 aa11.2□□□□□ -0.62
LDB1-203ENST00000461873 F6X3S4 739 aa11.2□□□□□ -0.62
LDB1-203ENST00000461873 TRAF5O00463 557 aa11.2□□□□□ -0.62
LDB1-203ENST00000461873 CTCFP49711 727 aaPredicted RBP11.2□□□□□ -0.62
LDB1-203ENST00000461873 KIF4BQ2VIQ3 1234 aa11.2□□□□□ -0.62
LDB1-203ENST00000461873 FAM161AQ3B820 660 aa11.2□□□□□ -0.62
LDB1-203ENST00000461873 RSBN1LQ6PCB5 846 aaPredicted RBP11.2□□□□□ -0.62
LDB1-203ENST00000461873 SAMD7Q7Z3H4 446 aa11.2□□□□□ -0.62
LDB1-203ENST00000461873 KRT26Q7Z3Y9 468 aa11.2□□□□□ -0.62
LDB1-203ENST00000461873 C2orf69Q8N8R5 385 aa11.2□□□□□ -0.62
LDB1-203ENST00000461873 PLA2G12BQ9BX93 195 aa11.2□□□□□ -0.62
LDB1-203ENST00000461873 GLIS2Q9BZE0 524 aaPredicted RBP11.2□□□□□ -0.62
LDB1-203ENST00000461873 COA1Q9GZY4 146 aa11.2□□□□□ -0.62
LDB1-203ENST00000461873 CNNM1Q9NRU3 951 aa11.2□□□□□ -0.62
LDB1-203ENST00000461873 HDAC9Q9UKV0 1011 aa11.2□□□□□ -0.62
LDB1-203ENST00000461873 RTL9Q8NET4 1388 aa11.19□□□□□ -0.62
LDB1-203ENST00000461873 SPEF2Q9C093 1822 aa11.19□□□□□ -0.62
LDB1-203ENST00000461873 ZNF804BA4D1E1 1349 aa11.19□□□□□ -0.62
LDB1-203ENST00000461873 MYO3BQ8WXR4 1341 aa11.19□□□□□ -0.62
LDB1-203ENST00000461873 GRM8O00222 908 aa11.19□□□□□ -0.62
LDB1-203ENST00000461873 ALDH1L1O75891 902 aa11.19□□□□□ -0.62
LDB1-203ENST00000461873 VIL1P09327 827 aaKnown RBP11.19□□□□□ -0.62
LDB1-203ENST00000461873 USP17L8P0C7I0 530 aa11.19□□□□□ -0.62
LDB1-203ENST00000461873 USP48Q86UV5 1035 aa11.19□□□□□ -0.62
LDB1-203ENST00000461873 TRPM4Q8TD43 1214 aa11.19□□□□□ -0.62
LDB1-203ENST00000461873 CAPNS2Q96L46 248 aa11.19□□□□□ -0.62
LDB1-203ENST00000461873 PCNTO95613 3336 aa11.19□□□□□ -0.62
LDB1-203ENST00000461873 ADAMTSL1Q8N6G6 1762 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms