RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 TRMT44Q8IYL2 757 aaKnown RBP13.3□□□□□ -0.28
SCNM1-204ENST00000461862 IFT57Q9NWB7 429 aa13.3□□□□□ -0.28
SCNM1-204ENST00000461862 PLEKHG2Q9H7P9 1386 aa13.3□□□□□ -0.28
SCNM1-204ENST00000461862 MAGEB6P1A0A0J9YX57 407 aa13.29□□□□□ -0.28
SCNM1-204ENST00000461862 GNAI1P63096 354 aa13.29□□□□□ -0.28
SCNM1-204ENST00000461862 NR5A1Q13285 461 aa13.29□□□□□ -0.28
SCNM1-204ENST00000461862 NR6A1Q15406 480 aa13.29□□□□□ -0.28
SCNM1-204ENST00000461862 GPKOWQ92917 476 aaPredicted RBP eCLIP13.29□□□□□ -0.28
SCNM1-204ENST00000461862 ZFAND3Q9H8U3 227 aa13.29□□□□□ -0.28
SCNM1-204ENST00000461862 COL5A2P05997 1499 aaPredicted RBP13.29□□□□□ -0.28
SCNM1-204ENST00000461862 HTATSF1O43719 755 aaKnown RBP13.28□□□□□ -0.28
SCNM1-204ENST00000461862 AP1G2O75843 785 aa13.28□□□□□ -0.28
SCNM1-204ENST00000461862 FKBPLQ9UIM3 349 aa13.28□□□□□ -0.28
SCNM1-204ENST00000461862 MAP4K5Q9Y4K4 846 aa13.28□□□□□ -0.28
SCNM1-204ENST00000461862 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.27□□□□□ -0.28
SCNM1-204ENST00000461862 NWD2Q9ULI1 1742 aa13.27□□□□□ -0.28
SCNM1-204ENST00000461862 WFS1O76024 890 aa13.27□□□□□ -0.29
SCNM1-204ENST00000461862 RXRBP28702 533 aa13.27□□□□□ -0.29
SCNM1-204ENST00000461862 VPS72Q15906 364 aa13.27□□□□□ -0.29
SCNM1-204ENST00000461862 ZNF428Q96B54 188 aa13.27□□□□□ -0.29
SCNM1-204ENST00000461862 ITPKCQ96DU7 683 aa13.27□□□□□ -0.29
SCNM1-204ENST00000461862 LTV1Q96GA3 475 aaPredicted RBP13.27□□□□□ -0.29
SCNM1-204ENST00000461862 GJD4Q96KN9 370 aaPredicted RBP13.27□□□□□ -0.29
SCNM1-204ENST00000461862 ZFP42Q96MM3 310 aa13.27□□□□□ -0.29
SCNM1-204ENST00000461862 HMX1Q9NP08 348 aaPredicted RBP13.27□□□□□ -0.29
SCNM1-204ENST00000461862 USP35Q9P2H5 1018 aa13.27□□□□□ -0.29
SCNM1-204ENST00000461862 TRPC5Q9UL62 973 aaPredicted RBP13.27□□□□□ -0.29
SCNM1-204ENST00000461862 CCDC9Q9Y3X0 531 aaKnown RBP13.27□□□□□ -0.29
SCNM1-204ENST00000461862 ZIC2O95409 532 aaPredicted RBP13.26□□□□□ -0.29
SCNM1-204ENST00000461862 ZNF853P0CG23 659 aa13.26□□□□□ -0.29
SCNM1-204ENST00000461862 FSHRP23945 695 aa13.26□□□□□ -0.29
SCNM1-204ENST00000461862 ERFEQ4G0M1 354 aa13.26□□□□□ -0.29
SCNM1-204ENST00000461862 MRPL14Q6P1L8 145 aaKnown RBP13.26□□□□□ -0.29
SCNM1-204ENST00000461862 ANKRD24Q8TF21 1146 aa13.26□□□□□ -0.29
SCNM1-204ENST00000461862 MAP3K5Q99683 1374 aa13.25□□□□□ -0.29
SCNM1-204ENST00000461862 SPATA31A5Q5VU36 1347 aa13.25□□□□□ -0.29
SCNM1-204ENST00000461862 SPATA31A7Q8IWB4 1347 aa13.25□□□□□ -0.29
SCNM1-204ENST00000461862 RARSP54136 660 aaKnown RBP13.25□□□□□ -0.29
SCNM1-204ENST00000461862 RBM6P78332 1123 aaKnown RBP13.25□□□□□ -0.29
SCNM1-204ENST00000461862 MTHFSDQ2M296 383 aaKnown RBP13.25□□□□□ -0.29
SCNM1-204ENST00000461862 EPS8L1Q8TE68 723 aa13.25□□□□□ -0.29
SCNM1-204ENST00000461862 TSR2Q969E8 191 aaKnown RBP13.25□□□□□ -0.29
SCNM1-204ENST00000461862 OCSTAMPQ9BR26 566 aa13.25□□□□□ -0.29
SCNM1-204ENST00000461862 TERTO14746 1132 aaKnown RBP13.24□□□□□ -0.29
SCNM1-204ENST00000461862 USP17L8P0C7I0 530 aa13.24□□□□□ -0.29
SCNM1-204ENST00000461862 RFC5P40937 340 aa13.24□□□□□ -0.29
SCNM1-204ENST00000461862 FAM182BQ5T319 152 aa13.24□□□□□ -0.29
SCNM1-204ENST00000461862 NBPF6Q5VWK0 638 aa13.24□□□□□ -0.29
SCNM1-204ENST00000461862 PDXDC2PQ6P474 469 aa13.24□□□□□ -0.29
SCNM1-204ENST00000461862 RTF1Q92541 710 aaKnown RBP13.24□□□□□ -0.29
SCNM1-204ENST00000461862 NBPF4Q96M43 638 aa13.24□□□□□ -0.29
SCNM1-204ENST00000461862 VIRMAQ69YN4 1812 aaKnown RBP13.24□□□□□ -0.29
SCNM1-204ENST00000461862 OVOS2A0A0G2JMS6 1433 aa13.23□□□□□ -0.29
SCNM1-204ENST00000461862 CRB1P82279 1406 aa13.23□□□□□ -0.29
SCNM1-204ENST00000461862 SPATA31A1Q5TZJ5 1347 aa13.23□□□□□ -0.29
SCNM1-204ENST00000461862 EXOSC9Q06265 439 aaKnown RBP13.23□□□□□ -0.29
SCNM1-204ENST00000461862 VASH1Q7L8A9 365 aaPredicted RBP13.23□□□□□ -0.29
SCNM1-204ENST00000461862 PURBQ96QR8 312 aaKnown RBP13.23□□□□□ -0.29
SCNM1-204ENST00000461862 GOPCQ9HD26 462 aa13.23□□□□□ -0.29
SCNM1-204ENST00000461862 GNAT3A8MTJ3 354 aa13.22□□□□□ -0.29
SCNM1-204ENST00000461862 EVA1CP58658 441 aa13.22□□□□□ -0.29
SCNM1-204ENST00000461862 PDE3AQ14432 1141 aa13.22□□□□□ -0.29
SCNM1-204ENST00000461862 AMOTQ4VCS5 1084 aa13.22□□□□□ -0.29
SCNM1-204ENST00000461862 THUMPD2Q9BTF0 503 aaKnown RBP13.22□□□□□ -0.29
SCNM1-204ENST00000461862 PKD1L3Q7Z443 1732 aa13.22□□□□□ -0.29
SCNM1-204ENST00000461862 PARP4Q9UKK3 1724 aaKnown RBP13.22□□□□□ -0.29
SCNM1-204ENST00000461862 ADAMTS7Q9UKP4 1686 aa13.21□□□□□ -0.29
SCNM1-204ENST00000461862 ZC3H4Q9UPT8 1303 aaKnown RBP13.21□□□□□ -0.29
SCNM1-204ENST00000461862 PLIN1O60240 522 aa13.21□□□□□ -0.29
SCNM1-204ENST00000461862 BCAR3O75815 825 aa13.21□□□□□ -0.29
SCNM1-204ENST00000461862 BRPF1P55201 1214 aaPredicted RBP13.21□□□□□ -0.29
SCNM1-204ENST00000461862 ALDH1L2Q3SY69 923 aa13.21□□□□□ -0.29
SCNM1-204ENST00000461862 PLEKHO1Q53GL0 409 aaPredicted RBP13.21□□□□□ -0.29
SCNM1-204ENST00000461862 SEPT12Q8IYM1 358 aa13.21□□□□□ -0.29
SCNM1-204ENST00000461862 USHBP1Q8N6Y0 703 aa13.21□□□□□ -0.29
SCNM1-204ENST00000461862 ARHGAP9Q9BRR9 750 aa13.21□□□□□ -0.29
SCNM1-204ENST00000461862 MBIPQ9NS73 344 aa13.21□□□□□ -0.29
SCNM1-204ENST00000461862 BABAM1Q9NWV8 329 aa13.21□□□□□ -0.29
SCNM1-204ENST00000461862 LAS1LQ9Y4W2 734 aaKnown RBP13.21□□□□□ -0.29
SCNM1-204ENST00000461862 BRWD3Q6RI45 1802 aa13.2□□□□□ -0.3
SCNM1-204ENST00000461862 CHL1O00533 1208 aa13.2□□□□□ -0.3
SCNM1-204ENST00000461862 CANXP27824 592 aaKnown RBP13.2□□□□□ -0.3
SCNM1-204ENST00000461862 IL27Q8NEV9 243 aa13.2□□□□□ -0.3
SCNM1-204ENST00000461862 WDR17Q8IZU2 1322 aa13.19□□□□□ -0.3
SCNM1-204ENST00000461862 KIF16BQ96L93 1317 aa13.19□□□□□ -0.3
SCNM1-204ENST00000461862 THSD7AQ9UPZ6 1657 aa13.19□□□□□ -0.3
SCNM1-204ENST00000461862 CSB-PGBD3P0DP91 1061 aa13.19□□□□□ -0.3
SCNM1-204ENST00000461862 DCTN1Q14203 1278 aa13.19□□□□□ -0.3
SCNM1-204ENST00000461862 TOM1L2Q6ZVM7 507 aa13.19□□□□□ -0.3
SCNM1-204ENST00000461862 MCM10Q7L590 875 aa13.19□□□□□ -0.3
SCNM1-204ENST00000461862 EXOC6Q8TAG9 804 aa13.19□□□□□ -0.3
SCNM1-204ENST00000461862 CRBNQ96SW2 442 aa13.19□□□□□ -0.3
SCNM1-204ENST00000461862 CEMIPQ8WUJ3 1361 aa13.19□□□□□ -0.3
SCNM1-204ENST00000461862 KDM3BQ7LBC6 1761 aa13.18□□□□□ -0.3
SCNM1-204ENST00000461862 AKAP4Q5JQC9 854 aa13.18□□□□□ -0.3
SCNM1-204ENST00000461862 SMC4Q9NTJ3 1288 aa13.18□□□□□ -0.3
SCNM1-204ENST00000461862 SIPA1L3O60292 1781 aaPredicted RBP13.17□□□□□ -0.3
SCNM1-204ENST00000461862 SOS1Q07889 1333 aaPredicted RBP13.17□□□□□ -0.3
SCNM1-204ENST00000461862 AAMPQ13685 434 aa13.17□□□□□ -0.3
SCNM1-204ENST00000461862 SCARF1Q14162 830 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms