RNA–Protein interactions for RNA: ENST00000461628.5

TFAP2A-204, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 3

Gene TFAP2A, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-204ENST00000461628 PHACTR3Q96KR7 559 aa16.23■□□□□ 0.19
TFAP2A-204ENST00000461628 MIS18AQ9NYP9 233 aa16.23■□□□□ 0.19
TFAP2A-204ENST00000461628 LRRC37AA6NMS7 1700 aa16.22■□□□□ 0.19
TFAP2A-204ENST00000461628 ECE2O60344 883 aa16.22■□□□□ 0.19
TFAP2A-204ENST00000461628 HCLS1P14317 486 aaPredicted RBP16.22■□□□□ 0.19
TFAP2A-204ENST00000461628 KCNA4P22459 653 aa16.22■□□□□ 0.19
TFAP2A-204ENST00000461628 TM4SF4P48230 202 aa16.22■□□□□ 0.19
TFAP2A-204ENST00000461628 CNGB1Q14028 1251 aaPredicted RBP16.22■□□□□ 0.19
TFAP2A-204ENST00000461628 SCARF1Q14162 830 aa16.22■□□□□ 0.19
TFAP2A-204ENST00000461628 ZNF34Q8IZ26 560 aa16.22■□□□□ 0.19
TFAP2A-204ENST00000461628 OTUD5Q96G74 571 aa16.22■□□□□ 0.19
TFAP2A-204ENST00000461628 KDM3BQ7LBC6 1761 aa16.21■□□□□ 0.19
TFAP2A-204ENST00000461628 BBOX1O75936 387 aa16.21■□□□□ 0.19
TFAP2A-204ENST00000461628 MYCP01106 439 aaPredicted RBP16.21■□□□□ 0.19
TFAP2A-204ENST00000461628 RPS12P25398 132 aaKnown RBP16.21■□□□□ 0.19
TFAP2A-204ENST00000461628 WASHC4Q2M389 1173 aa16.21■□□□□ 0.19
TFAP2A-204ENST00000461628 NOM1Q5C9Z4 860 aaKnown RBP16.21■□□□□ 0.19
TFAP2A-204ENST00000461628 PPP1R42Q7Z4L9 355 aa16.21■□□□□ 0.19
TFAP2A-204ENST00000461628 COL3A1P02461 1466 aaPredicted RBP16.21■□□□□ 0.19
TFAP2A-204ENST00000461628 LAMA3Q16787 3333 aa16.21■□□□□ 0.18
TFAP2A-204ENST00000461628 FKBP1BP68106 108 aa16.2■□□□□ 0.18
TFAP2A-204ENST00000461628 RBM27Q9P2N5 1060 aaKnown RBP16.2■□□□□ 0.18
TFAP2A-204ENST00000461628 C6orf229H3BNL8 230 aa16.19■□□□□ 0.18
TFAP2A-204ENST00000461628 PRKAR2BP31323 418 aa16.19■□□□□ 0.18
TFAP2A-204ENST00000461628 SREBF2Q12772 1141 aa16.19■□□□□ 0.18
TFAP2A-204ENST00000461628 PRKG1Q13976 671 aa16.19■□□□□ 0.18
TFAP2A-204ENST00000461628 AMER1Q5JTC6 1135 aaPredicted RBP16.19■□□□□ 0.18
TFAP2A-204ENST00000461628 SAMD1Q6SPF0 538 aaPredicted RBP16.19■□□□□ 0.18
TFAP2A-204ENST00000461628 DDX46Q7L014 1031 aaKnown RBP16.19■□□□□ 0.18
TFAP2A-204ENST00000461628 UTP14AQ9BVJ6 771 aaKnown RBP16.19■□□□□ 0.18
TFAP2A-204ENST00000461628 UNC80Q8N2C7 3258 aa16.18■□□□□ 0.18
TFAP2A-204ENST00000461628 COL4A1P02462 1669 aa16.18■□□□□ 0.18
TFAP2A-204ENST00000461628 GRAPQ13588 217 aa16.18■□□□□ 0.18
TFAP2A-204ENST00000461628 GRAPLQ8TC17 118 aaPredicted RBP16.18■□□□□ 0.18
TFAP2A-204ENST00000461628 CD99L2Q8TCZ2 262 aa16.18■□□□□ 0.18
TFAP2A-204ENST00000461628 NSFL1CQ9UNZ2 370 aaKnown RBP16.18■□□□□ 0.18
TFAP2A-204ENST00000461628 PTPN22Q9Y2R2 807 aa16.18■□□□□ 0.18
TFAP2A-204ENST00000461628 CC2D1BQ5T0F9 858 aaKnown RBP16.17■□□□□ 0.18
TFAP2A-204ENST00000461628 RTF1Q92541 710 aaKnown RBP16.17■□□□□ 0.18
TFAP2A-204ENST00000461628 TMEM106CQ9BVX2 250 aa16.17■□□□□ 0.18
TFAP2A-204ENST00000461628 POLLQ9UGP5 575 aa16.17■□□□□ 0.18
TFAP2A-204ENST00000461628 GIGYF2Q6Y7W6 1299 aaKnown RBP16.16■□□□□ 0.18
TFAP2A-204ENST00000461628 ARMC5Q96C12 935 aa16.16■□□□□ 0.18
TFAP2A-204ENST00000461628 ZNF609O15014 1411 aa16.15■□□□□ 0.18
TFAP2A-204ENST00000461628 GPSM2P81274 684 aa16.15■□□□□ 0.18
TFAP2A-204ENST00000461628 PTPN12Q05209 780 aaKnown RBP16.15■□□□□ 0.18
TFAP2A-204ENST00000461628 PARP10Q53GL7 1025 aa16.15■□□□□ 0.18
TFAP2A-204ENST00000461628 SLC10A5Q5PT55 438 aa16.15■□□□□ 0.18
TFAP2A-204ENST00000461628 THUMPD2Q9BTF0 503 aaKnown RBP16.15■□□□□ 0.18
TFAP2A-204ENST00000461628 PSME4Q14997 1843 aa16.15■□□□□ 0.18
TFAP2A-204ENST00000461628 VIL1P09327 827 aaKnown RBP16.14■□□□□ 0.17
TFAP2A-204ENST00000461628 CAP1Q01518 475 aa16.14■□□□□ 0.17
TFAP2A-204ENST00000461628 SLC4A8Q2Y0W8 1093 aa16.14■□□□□ 0.17
TFAP2A-204ENST00000461628 CFHR5Q9BXR6 569 aa16.14■□□□□ 0.17
TFAP2A-204ENST00000461628 FZD1Q9UP38 647 aa16.14■□□□□ 0.17
TFAP2A-204ENST00000461628 TCIRG1Q13488 830 aa16.13■□□□□ 0.17
TFAP2A-204ENST00000461628 G3V3G9 751 aa16.12■□□□□ 0.17
TFAP2A-204ENST00000461628 ZNF280AP59817 542 aaPredicted RBP16.12■□□□□ 0.17
TFAP2A-204ENST00000461628 DCAF8Q5TAQ9 597 aa16.12■□□□□ 0.17
TFAP2A-204ENST00000461628 CELF1Q92879 486 aaKnown RBP16.12■□□□□ 0.17
TFAP2A-204ENST00000461628 ERO1AQ96HE7 468 aa16.12■□□□□ 0.17
TFAP2A-204ENST00000461628 ZNF333Q96JL9 665 aa16.12■□□□□ 0.17
TFAP2A-204ENST00000461628 RSPH6AQ9H0K4 717 aa16.12■□□□□ 0.17
TFAP2A-204ENST00000461628 EFCC1Q9HA90 598 aa16.12■□□□□ 0.17
TFAP2A-204ENST00000461628 MYOZ2Q9NPC6 264 aa16.12■□□□□ 0.17
TFAP2A-204ENST00000461628 SPRYD7Q5W111 196 aa16.11■□□□□ 0.17
TFAP2A-204ENST00000461628 IFNL1Q8IU54 200 aa16.11■□□□□ 0.17
TFAP2A-204ENST00000461628 DLG5Q8TDM6 1919 aa16.1■□□□□ 0.17
TFAP2A-204ENST00000461628 IGF2BP3O00425 579 aaKnown RBP eCLIP16.1■□□□□ 0.17
TFAP2A-204ENST00000461628 ALDH1A1P00352 501 aa16.1■□□□□ 0.17
TFAP2A-204ENST00000461628 ANXA1P04083 346 aa16.1■□□□□ 0.17
TFAP2A-204ENST00000461628 TAF7Q15545 349 aaPredicted RBP16.1■□□□□ 0.17
TFAP2A-204ENST00000461628 NBPF9Q3BBW0 867 aa16.1■□□□□ 0.17
TFAP2A-204ENST00000461628 RSBN1LQ6PCB5 846 aaPredicted RBP16.1■□□□□ 0.17
TFAP2A-204ENST00000461628 DPF3Q92784 378 aa16.1■□□□□ 0.17
TFAP2A-204ENST00000461628 EYA3Q99504 573 aa16.1■□□□□ 0.17
TFAP2A-204ENST00000461628 TRMT112Q9UI30 125 aaKnown RBP16.1■□□□□ 0.17
TFAP2A-204ENST00000461628 PITPNM2Q9BZ72 1349 aa16.1■□□□□ 0.17
TFAP2A-204ENST00000461628 ZSWIM8A7E2V4 1837 aa16.1■□□□□ 0.17
TFAP2A-204ENST00000461628 SOX1O00570 391 aaPredicted RBP16.09■□□□□ 0.17
TFAP2A-204ENST00000461628 NF2P35240 595 aa16.09■□□□□ 0.17
TFAP2A-204ENST00000461628 MNX1P50219 401 aaPredicted RBP16.09■□□□□ 0.17
TFAP2A-204ENST00000461628 CRHR2Q13324 411 aa16.09■□□□□ 0.17
TFAP2A-204ENST00000461628 SLC9C1Q4G0N8 1177 aa16.09■□□□□ 0.17
TFAP2A-204ENST00000461628 TBC1D16Q8TBP0 767 aa16.09■□□□□ 0.17
TFAP2A-204ENST00000461628 LRCH3Q96II8 777 aa16.09■□□□□ 0.17
TFAP2A-204ENST00000461628 PTCH2Q9Y6C5 1203 aa16.09■□□□□ 0.17
TFAP2A-204ENST00000461628 WTIPA6NIX2 430 aaPredicted RBP16.08■□□□□ 0.16
TFAP2A-204ENST00000461628 PER1O15534 1290 aaPredicted RBP16.08■□□□□ 0.16
TFAP2A-204ENST00000461628 USP17L8P0C7I0 530 aa16.08■□□□□ 0.16
TFAP2A-204ENST00000461628 TMC4Q7Z404 712 aa16.08■□□□□ 0.16
TFAP2A-204ENST00000461628 NLRP10Q86W26 655 aa16.08■□□□□ 0.16
TFAP2A-204ENST00000461628 ANGEL1Q9UNK9 670 aaKnown RBP16.08■□□□□ 0.16
TFAP2A-204ENST00000461628 UFL1O94874 794 aa16.07■□□□□ 0.16
TFAP2A-204ENST00000461628 PROSER3Q2NL68 480 aa16.07■□□□□ 0.16
TFAP2A-204ENST00000461628 ARMC9Q7Z3E5 817 aa16.07■□□□□ 0.16
TFAP2A-204ENST00000461628 ZC3H12CQ9C0D7 883 aaKnown RBP16.07■□□□□ 0.16
TFAP2A-204ENST00000461628 SH3TC1Q8TE82 1336 aa16.07■□□□□ 0.16
TFAP2A-204ENST00000461628 MANSC4A6NHS7 340 aaPredicted RBP16.06■□□□□ 0.16
TFAP2A-204ENST00000461628 SASH1O94885 1247 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms