RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 GNRH1P01148 92 aa8.16□□□□□ -1.1
SPTA1-202ENST00000461624 ARHGEF10LQ9HCE6 1279 aa8.16□□□□□ -1.1
SPTA1-202ENST00000461624 MBIPQ9NS73 344 aa8.16□□□□□ -1.1
SPTA1-202ENST00000461624 PHRF1Q9P1Y6 1649 aaKnown RBP8.16□□□□□ -1.1
SPTA1-202ENST00000461624 LMO7Q8WWI1 1683 aa8.15□□□□□ -1.1
SPTA1-202ENST00000461624 HSPA6P17066 643 aa8.15□□□□□ -1.1
SPTA1-202ENST00000461624 MAP3K10Q02779 954 aa8.15□□□□□ -1.1
SPTA1-202ENST00000461624 NBPF10Q6P3W6 841 aaKnown RBP8.15□□□□□ -1.1
SPTA1-202ENST00000461624 RIPOR1Q6ZS17 1223 aa8.15□□□□□ -1.1
SPTA1-202ENST00000461624 NBPF15Q8N660 670 aa8.15□□□□□ -1.1
SPTA1-202ENST00000461624 PAPPAQ13219 1627 aa8.14□□□□□ -1.11
SPTA1-202ENST00000461624 SSH2Q76I76 1423 aa8.14□□□□□ -1.11
SPTA1-202ENST00000461624 RPGRIP1LQ68CZ1 1315 aa8.14□□□□□ -1.11
SPTA1-202ENST00000461624 MYCP01106 439 aaPredicted RBP8.14□□□□□ -1.11
SPTA1-202ENST00000461624 POU4F2Q12837 409 aa8.14□□□□□ -1.11
SPTA1-202ENST00000461624 LYPD4Q6UWN0 246 aa8.14□□□□□ -1.11
SPTA1-202ENST00000461624 TAS1R3Q7RTX0 852 aa8.14□□□□□ -1.11
SPTA1-202ENST00000461624 SCARF2Q96GP6 870 aaPredicted RBP8.14□□□□□ -1.11
SPTA1-202ENST00000461624 CEP126Q9P2H0 1117 aa8.14□□□□□ -1.11
SPTA1-202ENST00000461624 LRRC37A3O60309 1634 aa8.14□□□□□ -1.11
SPTA1-202ENST00000461624 ATP7BP35670 1465 aa8.13□□□□□ -1.11
SPTA1-202ENST00000461624 ANKARQ7Z5J8 1434 aa8.13□□□□□ -1.11
SPTA1-202ENST00000461624 KIAA0232Q92628 1395 aa8.13□□□□□ -1.11
SPTA1-202ENST00000461624 WASLO00401 505 aaPredicted RBP8.13□□□□□ -1.11
SPTA1-202ENST00000461624 MARSP56192 900 aaKnown RBP8.13□□□□□ -1.11
SPTA1-202ENST00000461624 DBN1Q16643 649 aa8.13□□□□□ -1.11
SPTA1-202ENST00000461624 KANK3Q6NY19 840 aa8.13□□□□□ -1.11
SPTA1-202ENST00000461624 PTF1AQ7RTS3 328 aa8.13□□□□□ -1.11
SPTA1-202ENST00000461624 KCTD17Q8N5Z5 321 aa8.13□□□□□ -1.11
SPTA1-202ENST00000461624 TRERF1Q96PN7 1200 aa8.13□□□□□ -1.11
SPTA1-202ENST00000461624 ESYT1Q9BSJ8 1104 aa8.13□□□□□ -1.11
SPTA1-202ENST00000461624 ENAMQ9NRM1 1142 aa8.13□□□□□ -1.11
SPTA1-202ENST00000461624 GTF3C3Q9Y5Q9 886 aa8.13□□□□□ -1.11
SPTA1-202ENST00000461624 OVOS2A0A0G2JMS6 1433 aa8.12□□□□□ -1.11
SPTA1-202ENST00000461624 OVOS2A0A0J9YW53 1432 aa8.12□□□□□ -1.11
SPTA1-202ENST00000461624 OVOS2Q6IE36 1432 aa8.12□□□□□ -1.11
SPTA1-202ENST00000461624 CELA2BP08218 269 aaPredicted RBP8.12□□□□□ -1.11
SPTA1-202ENST00000461624 GAS2L1Q99501 681 aaPredicted RBP8.12□□□□□ -1.11
SPTA1-202ENST00000461624 MTFR1LQ9H019 292 aa8.12□□□□□ -1.11
SPTA1-202ENST00000461624 TIMMDC1Q9NPL8 285 aa8.12□□□□□ -1.11
SPTA1-202ENST00000461624 PRDM11Q9NQV5 511 aa8.12□□□□□ -1.11
SPTA1-202ENST00000461624 DNMT3AQ9Y6K1 912 aaPredicted RBP8.12□□□□□ -1.11
SPTA1-202ENST00000461624 BCL9O00512 1426 aa8.12□□□□□ -1.11
SPTA1-202ENST00000461624 YTHDC2Q9H6S0 1430 aaKnown RBP8.12□□□□□ -1.11
SPTA1-202ENST00000461624 ATP10DQ9P241 1426 aa8.12□□□□□ -1.11
SPTA1-202ENST00000461624 ADCY9O60503 1353 aa8.11□□□□□ -1.11
SPTA1-202ENST00000461624 AATKQ6ZMQ8 1374 aa8.11□□□□□ -1.11
SPTA1-202ENST00000461624 F11P03951 625 aa8.11□□□□□ -1.11
SPTA1-202ENST00000461624 EIF4G2P78344 907 aaKnown RBP eCLIP8.11□□□□□ -1.11
SPTA1-202ENST00000461624 PDE3BQ13370 1112 aa8.11□□□□□ -1.11
SPTA1-202ENST00000461624 CNKSR1Q969H4 720 aa8.11□□□□□ -1.11
SPTA1-202ENST00000461624 GTPBP3Q969Y2 492 aaKnown RBP8.11□□□□□ -1.11
SPTA1-202ENST00000461624 CCDC85AQ96PX6 553 aaPredicted RBP8.11□□□□□ -1.11
SPTA1-202ENST00000461624 PIK3C2GO75747 1445 aa8.11□□□□□ -1.11
SPTA1-202ENST00000461624 ADGRF5Q8IZF2 1346 aa8.1□□□□□ -1.11
SPTA1-202ENST00000461624 GPR25O00155 361 aa8.1□□□□□ -1.11
SPTA1-202ENST00000461624 IL2RAP01589 272 aa8.1□□□□□ -1.11
SPTA1-202ENST00000461624 FAM50AQ14320 339 aaKnown RBP8.1□□□□□ -1.11
SPTA1-202ENST00000461624 MCM6Q14566 821 aa8.1□□□□□ -1.11
SPTA1-202ENST00000461624 DNAJC5GQ8N7S2 189 aa8.1□□□□□ -1.11
SPTA1-202ENST00000461624 SIRT1Q96EB6 747 aa8.1□□□□□ -1.11
SPTA1-202ENST00000461624 ARXQ96QS3 562 aa8.1□□□□□ -1.11
SPTA1-202ENST00000461624 NUCKS1Q9H1E3 243 aaKnown RBP8.1□□□□□ -1.11
SPTA1-202ENST00000461624 RAB6BQ9NRW1 208 aa8.1□□□□□ -1.11
SPTA1-202ENST00000461624 LRRC4BQ9NT99 713 aa8.1□□□□□ -1.11
SPTA1-202ENST00000461624 STK26Q9P289 416 aa8.1□□□□□ -1.11
SPTA1-202ENST00000461624 NSFL1CQ9UNZ2 370 aaKnown RBP8.1□□□□□ -1.11
SPTA1-202ENST00000461624 TBC1D2BQ9UPU7 963 aa8.1□□□□□ -1.11
SPTA1-202ENST00000461624 HRH3Q9Y5N1 445 aa8.1□□□□□ -1.11
SPTA1-202ENST00000461624 WNK3Q9BYP7 1800 aa8.1□□□□□ -1.11
SPTA1-202ENST00000461624 DHX57Q6P158 1386 aaKnown RBP8.1□□□□□ -1.11
SPTA1-202ENST00000461624 ACIN1Q9UKV3 1341 aaKnown RBP8.09□□□□□ -1.11
SPTA1-202ENST00000461624 IRS1P35568 1242 aa8.09□□□□□ -1.11
SPTA1-202ENST00000461624 CENPCQ03188 943 aa8.09□□□□□ -1.11
SPTA1-202ENST00000461624 CHRNA2Q15822 529 aa8.09□□□□□ -1.11
SPTA1-202ENST00000461624 SLC15A2Q16348 729 aa8.09□□□□□ -1.11
SPTA1-202ENST00000461624 LARP1Q6PKG0 1096 aaKnown RBP8.09□□□□□ -1.11
SPTA1-202ENST00000461624 TCP11L2Q8N4U5 519 aa8.09□□□□□ -1.11
SPTA1-202ENST00000461624 QSER1Q2KHR3 1735 aa8.09□□□□□ -1.11
SPTA1-202ENST00000461624 PRR36Q9H6K5 1346 aa8.08□□□□□ -1.12
SPTA1-202ENST00000461624 A0A1B0GTH6 734 aa8.08□□□□□ -1.12
SPTA1-202ENST00000461624 RAD21O60216 631 aa8.08□□□□□ -1.12
SPTA1-202ENST00000461624 GTF2E1P29083 439 aaPredicted RBP8.08□□□□□ -1.12
SPTA1-202ENST00000461624 PRELPP51888 382 aa8.08□□□□□ -1.12
SPTA1-202ENST00000461624 GPR162Q16538 588 aa8.08□□□□□ -1.12
SPTA1-202ENST00000461624 COL13A1Q5TAT6 717 aaPredicted RBP8.08□□□□□ -1.12
SPTA1-202ENST00000461624 TMEM132EQ6IEE7 984 aa8.08□□□□□ -1.12
SPTA1-202ENST00000461624 PMFBP1Q8TBY8 1022 aa8.08□□□□□ -1.12
SPTA1-202ENST00000461624 XAGE2Q96GT9 111 aa8.08□□□□□ -1.12
SPTA1-202ENST00000461624 ZSCAN10Q96SZ4 725 aaPredicted RBP8.08□□□□□ -1.12
SPTA1-202ENST00000461624 CDCA7Q9BWT1 371 aaPredicted RBP8.08□□□□□ -1.12
SPTA1-202ENST00000461624 STRN4Q9NRL3 753 aa8.08□□□□□ -1.12
SPTA1-202ENST00000461624 USP35Q9P2H5 1018 aa8.08□□□□□ -1.12
SPTA1-202ENST00000461624 DOLKQ9UPQ8 538 aa8.08□□□□□ -1.12
SPTA1-202ENST00000461624 SPATA31E1Q6ZUB1 1445 aa8.08□□□□□ -1.12
SPTA1-202ENST00000461624 COL5A2P05997 1499 aaPredicted RBP8.07□□□□□ -1.12
SPTA1-202ENST00000461624 BCRP11274 1271 aa8.07□□□□□ -1.12
SPTA1-202ENST00000461624 YBX3P16989 372 aaKnown RBP eCLIP8.07□□□□□ -1.12
SPTA1-202ENST00000461624 MX2P20592 715 aa8.07□□□□□ -1.12
SPTA1-202ENST00000461624 FOXK2Q01167 660 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms