RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 POLLQ9UGP5 575 aa13.31□□□□□ -0.28
TRAPPC12-213ENST00000461577 DUOX1Q9NRD9 1551 aa13.31□□□□□ -0.28
TRAPPC12-213ENST00000461577 XDHP47989 1333 aa13.31□□□□□ -0.28
TRAPPC12-213ENST00000461577 G3V3G9 751 aa13.3□□□□□ -0.28
TRAPPC12-213ENST00000461577 KIF3CO14782 793 aa13.3□□□□□ -0.28
TRAPPC12-213ENST00000461577 RIMBP2O15034 1052 aa13.3□□□□□ -0.28
TRAPPC12-213ENST00000461577 UBTFL1P0CB47 393 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC12-213ENST00000461577 ATP2B4P23634 1241 aa13.3□□□□□ -0.28
TRAPPC12-213ENST00000461577 DCAF8Q5TAQ9 597 aa13.3□□□□□ -0.28
TRAPPC12-213ENST00000461577 TBC1D16Q8TBP0 767 aa13.3□□□□□ -0.28
TRAPPC12-213ENST00000461577 BICC1Q9H694 974 aaKnown RBP13.3□□□□□ -0.28
TRAPPC12-213ENST00000461577 MINPP1Q9UNW1 487 aa13.3□□□□□ -0.28
TRAPPC12-213ENST00000461577 HDAC5Q9UQL6 1122 aa13.3□□□□□ -0.28
TRAPPC12-213ENST00000461577 ZNF541Q9H0D2 1346 aa13.3□□□□□ -0.28
TRAPPC12-213ENST00000461577 COL4A5P29400 1685 aa13.3□□□□□ -0.28
TRAPPC12-213ENST00000461577 LTBP1Q14766 1721 aa13.3□□□□□ -0.28
TRAPPC12-213ENST00000461577 WDR90Q96KV7 1748 aa13.3□□□□□ -0.28
TRAPPC12-213ENST00000461577 TRIM27P14373 513 aa13.29□□□□□ -0.28
TRAPPC12-213ENST00000461577 VEGFAP15692 232 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-213ENST00000461577 INTS3Q68E01 1043 aaKnown RBP13.29□□□□□ -0.28
TRAPPC12-213ENST00000461577 CLUAP1Q96AJ1 413 aa13.29□□□□□ -0.28
TRAPPC12-213ENST00000461577 KAZALD1Q96I82 304 aa13.29□□□□□ -0.28
TRAPPC12-213ENST00000461577 GPR101Q96P66 508 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-213ENST00000461577 ZC3H12CQ9C0D7 883 aaKnown RBP13.29□□□□□ -0.28
TRAPPC12-213ENST00000461577 ANKRD2Q9GZV1 360 aa13.29□□□□□ -0.28
TRAPPC12-213ENST00000461577 CNNM1Q9NRU3 951 aa13.29□□□□□ -0.28
TRAPPC12-213ENST00000461577 ZNRF3Q9ULT6 936 aa13.29□□□□□ -0.28
TRAPPC12-213ENST00000461577 GJA3Q9Y6H8 435 aa13.29□□□□□ -0.28
TRAPPC12-213ENST00000461577 FTSJ3Q8IY81 847 aaKnown RBP13.28□□□□□ -0.28
TRAPPC12-213ENST00000461577 GPC2Q8N158 579 aa13.28□□□□□ -0.28
TRAPPC12-213ENST00000461577 ZNF594Q96JF6 807 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC12-213ENST00000461577 TNNQ9UQP3 1299 aa13.28□□□□□ -0.28
TRAPPC12-213ENST00000461577 GNAI3P08754 354 aa13.27□□□□□ -0.29
TRAPPC12-213ENST00000461577 KCNJ4P48050 445 aa13.27□□□□□ -0.29
TRAPPC12-213ENST00000461577 C1QTNF8P60827 252 aa13.27□□□□□ -0.29
TRAPPC12-213ENST00000461577 CHRNDQ07001 517 aa13.27□□□□□ -0.29
TRAPPC12-213ENST00000461577 DOK7Q18PE1 504 aa13.27□□□□□ -0.29
TRAPPC12-213ENST00000461577 RABL6Q3YEC7 729 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC12-213ENST00000461577 LDHAL6AQ6ZMR3 332 aa13.27□□□□□ -0.29
TRAPPC12-213ENST00000461577 ANKRD44Q8N8A2 993 aa13.27□□□□□ -0.29
TRAPPC12-213ENST00000461577 YTHDC1Q96MU7 727 aaKnown RBP13.27□□□□□ -0.29
TRAPPC12-213ENST00000461577 DBNDD1Q9H9R9 158 aa13.27□□□□□ -0.29
TRAPPC12-213ENST00000461577 LEMD3Q9Y2U8 911 aa13.27□□□□□ -0.29
TRAPPC12-213ENST00000461577 IQCA1LA6NCM1 817 aa13.26□□□□□ -0.29
TRAPPC12-213ENST00000461577 ECE2O60344 883 aa13.26□□□□□ -0.29
TRAPPC12-213ENST00000461577 TOMM70O94826 608 aa13.26□□□□□ -0.29
TRAPPC12-213ENST00000461577 SCN4AP35499 1836 aa13.26□□□□□ -0.29
TRAPPC12-213ENST00000461577 TNIP1Q15025 636 aa13.26□□□□□ -0.29
TRAPPC12-213ENST00000461577 CIAPIN1Q6FI81 312 aa13.26□□□□□ -0.29
TRAPPC12-213ENST00000461577 DZIP1LQ8IYY4 767 aaKnown RBP13.26□□□□□ -0.29
TRAPPC12-213ENST00000461577 L3MBTL3Q96JM7 780 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC12-213ENST00000461577 MEIS3Q99687 375 aa13.26□□□□□ -0.29
TRAPPC12-213ENST00000461577 ZNF804BA4D1E1 1349 aa13.25□□□□□ -0.29
TRAPPC12-213ENST00000461577 POTECB2RU33 542 aa13.25□□□□□ -0.29
TRAPPC12-213ENST00000461577 PLIN1O60240 522 aa13.25□□□□□ -0.29
TRAPPC12-213ENST00000461577 RAD17O75943 681 aa13.25□□□□□ -0.29
TRAPPC12-213ENST00000461577 LMOD1P29536 600 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC12-213ENST00000461577 CXCL9Q07325 125 aa13.25□□□□□ -0.29
TRAPPC12-213ENST00000461577 TMEM57Q8N5G2 664 aa13.25□□□□□ -0.29
TRAPPC12-213ENST00000461577 HACL1Q9UJ83 578 aa13.25□□□□□ -0.29
TRAPPC12-213ENST00000461577 RCAN3Q9UKA8 241 aa13.25□□□□□ -0.29
TRAPPC12-213ENST00000461577 LRRFIP2Q9Y608 721 aaKnown RBP13.25□□□□□ -0.29
TRAPPC12-213ENST00000461577 A0A1B0GUL6 1792 aa13.25□□□□□ -0.29
TRAPPC12-213ENST00000461577 MED23Q9ULK4 1368 aa13.24□□□□□ -0.29
TRAPPC12-213ENST00000461577 YDJCA8MPS7 323 aa13.24□□□□□ -0.29
TRAPPC12-213ENST00000461577 MS4A1P11836 297 aa13.24□□□□□ -0.29
TRAPPC12-213ENST00000461577 HELBQ8NG08 1087 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC12-213ENST00000461577 RBM46Q8TBY0 533 aaKnown RBP13.24□□□□□ -0.29
TRAPPC12-213ENST00000461577 WTIPA6NIX2 430 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC12-213ENST00000461577 TAF5LO75529 589 aa13.23□□□□□ -0.29
TRAPPC12-213ENST00000461577 ITPRIPQ8IWB1 547 aa13.23□□□□□ -0.29
TRAPPC12-213ENST00000461577 PUS3Q9BZE2 481 aaKnown RBP13.23□□□□□ -0.29
TRAPPC12-213ENST00000461577 MROH5Q6ZUA9 1318 aa13.22□□□□□ -0.29
TRAPPC12-213ENST00000461577 GNAI2P04899 355 aa13.22□□□□□ -0.29
TRAPPC12-213ENST00000461577 EPHX2P34913 555 aa13.22□□□□□ -0.29
TRAPPC12-213ENST00000461577 EAPPQ56P03 285 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC12-213ENST00000461577 METTL24Q5JXM2 366 aa13.22□□□□□ -0.29
TRAPPC12-213ENST00000461577 KLHDC4Q8TBB5 520 aa13.22□□□□□ -0.29
TRAPPC12-213ENST00000461577 TAF1DQ9H5J8 278 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC12-213ENST00000461577 PSMD14O00487 310 aa13.21□□□□□ -0.29
TRAPPC12-213ENST00000461577 GMPSP49915 693 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC12-213ENST00000461577 FSTL1Q12841 308 aa13.21□□□□□ -0.29
TRAPPC12-213ENST00000461577 LRRC24Q50LG9 513 aa13.21□□□□□ -0.29
TRAPPC12-213ENST00000461577 PODNQ7Z5L7 613 aa13.21□□□□□ -0.29
TRAPPC12-213ENST00000461577 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC12-213ENST00000461577 SMC1BQ8NDV3 1235 aa13.21□□□□□ -0.29
TRAPPC12-213ENST00000461577 COA1Q9GZY4 146 aa13.21□□□□□ -0.29
TRAPPC12-213ENST00000461577 CLEC11AQ9Y240 323 aa13.21□□□□□ -0.29
TRAPPC12-213ENST00000461577 RIPOR2Q9Y4F9 1068 aa13.21□□□□□ -0.29
TRAPPC12-213ENST00000461577 SNAP23O00161 211 aa13.2□□□□□ -0.3
TRAPPC12-213ENST00000461577 RLBP1P12271 317 aa13.2□□□□□ -0.3
TRAPPC12-213ENST00000461577 RFX5P48382 616 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC12-213ENST00000461577 SCNN1DP51172 638 aa13.2□□□□□ -0.3
TRAPPC12-213ENST00000461577 PTPN12Q05209 780 aaKnown RBP13.2□□□□□ -0.3
TRAPPC12-213ENST00000461577 PNMA8AQ86V59 439 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC12-213ENST00000461577 PANK1Q8TE04 598 aa13.2□□□□□ -0.3
TRAPPC12-213ENST00000461577 FBXW7Q969H0 707 aa13.2□□□□□ -0.3
TRAPPC12-213ENST00000461577 KCNQ5Q9NR82 932 aa13.2□□□□□ -0.3
TRAPPC12-213ENST00000461577 GPRC5DQ9NZD1 345 aa13.2□□□□□ -0.3
TRAPPC12-213ENST00000461577 PSME4Q14997 1843 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms