RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 LENG1Q96BZ8 264 aaPredicted RBP8.59□□□□□ -1.03
UBA3-204ENST00000461522 MBTPS1Q14703 1052 aa8.58□□□□□ -1.04
UBA3-204ENST00000461522 COL13A1Q5TAT6 717 aaPredicted RBP8.58□□□□□ -1.04
UBA3-204ENST00000461522 SHISA2Q6UWI4 295 aa8.58□□□□□ -1.04
UBA3-204ENST00000461522 FBXO11Q86XK2 927 aa8.58□□□□□ -1.04
UBA3-204ENST00000461522 NUDT16Q96DE0 195 aaKnown RBP8.58□□□□□ -1.04
UBA3-204ENST00000461522 RBSNQ9H1K0 784 aa8.58□□□□□ -1.04
UBA3-204ENST00000461522 CARNS1A5YM72 827 aa8.57□□□□□ -1.04
UBA3-204ENST00000461522 TTC39BQ5VTQ0 682 aaPredicted RBP8.57□□□□□ -1.04
UBA3-204ENST00000461522 PDE12Q6L8Q7 609 aaKnown RBP8.57□□□□□ -1.04
UBA3-204ENST00000461522 TPSG1Q9NRR2 321 aa8.57□□□□□ -1.04
UBA3-204ENST00000461522 ABI2Q9NYB9 513 aaPredicted RBP8.57□□□□□ -1.04
UBA3-204ENST00000461522 MPSTP25325 297 aa8.56□□□□□ -1.04
UBA3-204ENST00000461522 NRG1Q02297 640 aaPredicted RBP8.56□□□□□ -1.04
UBA3-204ENST00000461522 HYAL2Q12891 473 aa8.56□□□□□ -1.04
UBA3-204ENST00000461522 NOM1Q5C9Z4 860 aaKnown RBP8.56□□□□□ -1.04
UBA3-204ENST00000461522 DEAF1O75398 565 aaPredicted RBP8.55□□□□□ -1.04
UBA3-204ENST00000461522 KIF4AO95239 1232 aa8.55□□□□□ -1.04
UBA3-204ENST00000461522 RPLP1P05386 114 aaKnown RBP8.55□□□□□ -1.04
UBA3-204ENST00000461522 NPR3P17342 541 aa8.55□□□□□ -1.04
UBA3-204ENST00000461522 EIF1AXP47813 144 aaKnown RBP8.55□□□□□ -1.04
UBA3-204ENST00000461522 RSPO4Q2I0M5 234 aaPredicted RBP8.55□□□□□ -1.04
UBA3-204ENST00000461522 EDEM1Q92611 657 aa8.55□□□□□ -1.04
UBA3-204ENST00000461522 ELP3Q9H9T3 547 aa8.55□□□□□ -1.04
UBA3-204ENST00000461522 TMEM63CQ9P1W3 806 aa8.55□□□□□ -1.04
UBA3-204ENST00000461522 USTQ9Y2C2 406 aa8.55□□□□□ -1.04
UBA3-204ENST00000461522 PDGFAP04085 211 aa8.54□□□□□ -1.04
UBA3-204ENST00000461522 MZF1P28698 734 aaPredicted RBP8.54□□□□□ -1.04
UBA3-204ENST00000461522 MTMR3Q13615 1198 aa8.54□□□□□ -1.04
UBA3-204ENST00000461522 NKAPLQ5M9Q1 402 aa8.54□□□□□ -1.04
UBA3-204ENST00000461522 GDF6Q6KF10 455 aaPredicted RBP8.54□□□□□ -1.04
UBA3-204ENST00000461522 XKR5Q6UX68 686 aa8.54□□□□□ -1.04
UBA3-204ENST00000461522 ERICH6Q7L0X2 663 aa8.54□□□□□ -1.04
UBA3-204ENST00000461522 TXNRD3Q86VQ6 643 aa8.54□□□□□ -1.04
UBA3-204ENST00000461522 IL22RA1Q8N6P7 574 aa8.54□□□□□ -1.04
UBA3-204ENST00000461522 TRIM33Q9UPN9 1127 aa8.54□□□□□ -1.04
UBA3-204ENST00000461522 CYP2E1P05181 493 aaPredicted RBP8.53□□□□□ -1.04
UBA3-204ENST00000461522 ITGB7P26010 798 aa8.53□□□□□ -1.04
UBA3-204ENST00000461522 DNM1Q05193 864 aaKnown RBP8.53□□□□□ -1.04
UBA3-204ENST00000461522 ALKBH2Q6NS38 261 aa8.53□□□□□ -1.04
UBA3-204ENST00000461522 ZNF438Q7Z4V0 828 aa8.53□□□□□ -1.04
UBA3-204ENST00000461522 CACTIN-AS1Q8N1I8 211 aa8.53□□□□□ -1.04
UBA3-204ENST00000461522 DLL1O00548 723 aa8.52□□□□□ -1.05
UBA3-204ENST00000461522 ATP11AP98196 1134 aa8.52□□□□□ -1.05
UBA3-204ENST00000461522 IGF2-ASQ6U949 168 aa8.52□□□□□ -1.05
UBA3-204ENST00000461522 SPACA7Q96KW9 195 aa8.52□□□□□ -1.05
UBA3-204ENST00000461522 GGNBP2Q9H3C7 697 aa8.52□□□□□ -1.05
UBA3-204ENST00000461522 SRA1Q9HD15 236 aaKnown RBP8.52□□□□□ -1.05
UBA3-204ENST00000461522 CNTN3Q9P232 1028 aa8.52□□□□□ -1.05
UBA3-204ENST00000461522 USP21Q9UK80 565 aa8.52□□□□□ -1.05
UBA3-204ENST00000461522 MTMR7Q9Y216 660 aa8.52□□□□□ -1.05
UBA3-204ENST00000461522 PCSK2P16519 638 aa8.51□□□□□ -1.05
UBA3-204ENST00000461522 SF3B2Q13435 895 aaKnown RBP8.51□□□□□ -1.05
UBA3-204ENST00000461522 CEP120Q8N960 986 aa8.51□□□□□ -1.05
UBA3-204ENST00000461522 SEMA6BQ9H3T3 888 aa8.51□□□□□ -1.05
UBA3-204ENST00000461522 FAM13AO94988 1023 aa8.5□□□□□ -1.05
UBA3-204ENST00000461522 SETDB1Q15047 1291 aa8.5□□□□□ -1.05
UBA3-204ENST00000461522 MAP4K3Q8IVH8 894 aa8.5□□□□□ -1.05
UBA3-204ENST00000461522 SSBP4Q9BWG4 385 aaPredicted RBP8.5□□□□□ -1.05
UBA3-204ENST00000461522 MUC3BQ9H195 1237 aa8.5□□□□□ -1.05
UBA3-204ENST00000461522 RASSF4Q9H2L5 321 aa8.5□□□□□ -1.05
UBA3-204ENST00000461522 POLIQ9UNA4 740 aa8.5□□□□□ -1.05
UBA3-204ENST00000461522 A6NHS1 94 aa8.49□□□□□ -1.05
UBA3-204ENST00000461522 DYRK3O43781 588 aa8.49□□□□□ -1.05
UBA3-204ENST00000461522 SMNDC1O75940 238 aaKnown RBP eCLIP8.49□□□□□ -1.05
UBA3-204ENST00000461522 FKBP4Q02790 459 aaKnown RBP eCLIP8.49□□□□□ -1.05
UBA3-204ENST00000461522 CEP135Q66GS9 1140 aa8.49□□□□□ -1.05
UBA3-204ENST00000461522 ADAMTSL4Q6UY14 1074 aa8.49□□□□□ -1.05
UBA3-204ENST00000461522 C1orf127Q8N9H9 656 aa8.49□□□□□ -1.05
UBA3-204ENST00000461522 PBX4Q9BYU1 374 aa8.49□□□□□ -1.05
UBA3-204ENST00000461522 KANSL3Q9P2N6 904 aa8.49□□□□□ -1.05
UBA3-204ENST00000461522 SALL4Q9UJQ4 1053 aa8.49□□□□□ -1.05
UBA3-204ENST00000461522 C8orf34Q49A92 452 aa8.48□□□□□ -1.05
UBA3-204ENST00000461522 NCAPG2Q86XI2 1143 aa8.48□□□□□ -1.05
UBA3-204ENST00000461522 WFDC12Q8WWY7 111 aa8.48□□□□□ -1.05
UBA3-204ENST00000461522 CHRDQ9H2X0 955 aa8.48□□□□□ -1.05
UBA3-204ENST00000461522 PPME1Q9Y570 386 aa8.48□□□□□ -1.05
UBA3-204ENST00000461522 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.48□□□□□ -1.05
UBA3-204ENST00000461522 SUPT5HO00267 1087 aaKnown RBP8.47□□□□□ -1.05
UBA3-204ENST00000461522 FZD6O60353 706 aa8.47□□□□□ -1.05
UBA3-204ENST00000461522 ABL1P00519 1130 aa8.47□□□□□ -1.05
UBA3-204ENST00000461522 NOS3P29474 1203 aa8.47□□□□□ -1.05
UBA3-204ENST00000461522 ZNF211Q13398 564 aaPredicted RBP8.47□□□□□ -1.05
UBA3-204ENST00000461522 B4GALNT3Q6L9W6 998 aa8.47□□□□□ -1.05
UBA3-204ENST00000461522 TTC16Q8NEE8 873 aa8.47□□□□□ -1.05
UBA3-204ENST00000461522 DCAF11Q8TEB1 546 aa8.47□□□□□ -1.05
UBA3-204ENST00000461522 H2AFB1P0C5Y9 115 aa8.46□□□□□ -1.06
UBA3-204ENST00000461522 H2AFB2P0C5Z0 115 aa8.46□□□□□ -1.06
UBA3-204ENST00000461522 CES1P23141 567 aa8.46□□□□□ -1.06
UBA3-204ENST00000461522 CDC27P30260 824 aa8.46□□□□□ -1.06
UBA3-204ENST00000461522 IREB2P48200 963 aaKnown RBP8.46□□□□□ -1.06
UBA3-204ENST00000461522 ARID3AQ99856 593 aa8.46□□□□□ -1.06
UBA3-204ENST00000461522 LACRTQ9GZZ8 138 aa8.46□□□□□ -1.06
UBA3-204ENST00000461522 MRPL18Q9H0U6 180 aaKnown RBP8.46□□□□□ -1.06
UBA3-204ENST00000461522 ANO2Q9NQ90 1003 aa8.46□□□□□ -1.06
UBA3-204ENST00000461522 EGFL7Q9UHF1 273 aa8.46□□□□□ -1.06
UBA3-204ENST00000461522 USP5P45974 858 aa8.45□□□□□ -1.06
UBA3-204ENST00000461522 AAMPQ13685 434 aa8.45□□□□□ -1.06
UBA3-204ENST00000461522 TMEM130Q8N3G9 435 aa8.45□□□□□ -1.06
UBA3-204ENST00000461522 PMEPA1Q969W9 287 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms