RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 SCN7AQ01118 1682 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 SH3TC1Q8TE82 1336 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 LY75O60449 1722 aa8.23□□□□□ -1.09
MSH2-204ENST00000461394 CASZ1Q86V15 1759 aa8.22□□□□□ -1.09
MSH2-204ENST00000461394 ZNF609O15014 1411 aa8.22□□□□□ -1.09
MSH2-204ENST00000461394 ST18O60284 1047 aa8.22□□□□□ -1.09
MSH2-204ENST00000461394 ZPR1O75312 459 aa8.22□□□□□ -1.09
MSH2-204ENST00000461394 ITGA6P23229 1130 aa8.22□□□□□ -1.09
MSH2-204ENST00000461394 TTC39AQ5SRH9 613 aa8.22□□□□□ -1.09
MSH2-204ENST00000461394 SUSD4Q5VX71 490 aa8.22□□□□□ -1.09
MSH2-204ENST00000461394 PTF1AQ7RTS3 328 aa8.22□□□□□ -1.09
MSH2-204ENST00000461394 AK7Q96M32 723 aa8.22□□□□□ -1.09
MSH2-204ENST00000461394 PUS3Q9BZE2 481 aaKnown RBP8.22□□□□□ -1.09
MSH2-204ENST00000461394 GREM2Q9H772 168 aa8.22□□□□□ -1.09
MSH2-204ENST00000461394 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.22□□□□□ -1.09
MSH2-204ENST00000461394 DDX60Q8IY21 1712 aaKnown RBP8.22□□□□□ -1.09
MSH2-204ENST00000461394 UBN2Q6ZU65 1347 aa8.22□□□□□ -1.09
MSH2-204ENST00000461394 CNTNAP4Q9C0A0 1308 aa8.22□□□□□ -1.09
MSH2-204ENST00000461394 PHF14O94880 888 aa8.21□□□□□ -1.1
MSH2-204ENST00000461394 HCLS1P14317 486 aaPredicted RBP8.21□□□□□ -1.1
MSH2-204ENST00000461394 ATP5JP18859 108 aa8.21□□□□□ -1.1
MSH2-204ENST00000461394 CCDC158Q5M9N0 1113 aa8.21□□□□□ -1.1
MSH2-204ENST00000461394 LDHAL6AQ6ZMR3 332 aa8.21□□□□□ -1.1
MSH2-204ENST00000461394 ATG9AQ7Z3C6 839 aa8.21□□□□□ -1.1
MSH2-204ENST00000461394 TTLL11Q8NHH1 800 aa8.21□□□□□ -1.1
MSH2-204ENST00000461394 SNX21Q969T3 373 aa8.21□□□□□ -1.1
MSH2-204ENST00000461394 SLC24A3Q9HC58 644 aa8.21□□□□□ -1.1
MSH2-204ENST00000461394 GPR108Q9NPR9 543 aa8.21□□□□□ -1.1
MSH2-204ENST00000461394 DBNLQ9UJU6 430 aaKnown RBP8.21□□□□□ -1.1
MSH2-204ENST00000461394 RTCBQ9Y3I0 505 aaKnown RBP8.21□□□□□ -1.1
MSH2-204ENST00000461394 C4BP0C0L5 1744 aa8.2□□□□□ -1.1
MSH2-204ENST00000461394 A0A1B0GUL7 405 aa8.2□□□□□ -1.1
MSH2-204ENST00000461394 K7ELQ4 463 aaPredicted RBP8.2□□□□□ -1.1
MSH2-204ENST00000461394 SGSM2O43147 1006 aa8.2□□□□□ -1.1
MSH2-204ENST00000461394 CSF1RP07333 972 aa8.2□□□□□ -1.1
MSH2-204ENST00000461394 IFIT1P09914 478 aaKnown RBP8.2□□□□□ -1.1
MSH2-204ENST00000461394 IGHMBP2P38935 993 aaKnown RBP8.2□□□□□ -1.1
MSH2-204ENST00000461394 TIMM10P62072 90 aa8.2□□□□□ -1.1
MSH2-204ENST00000461394 NMIQ13287 307 aaPredicted RBP8.2□□□□□ -1.1
MSH2-204ENST00000461394 ATP2B3Q16720 1220 aa8.2□□□□□ -1.1
MSH2-204ENST00000461394 CCDC152Q4G0S7 254 aa8.2□□□□□ -1.1
MSH2-204ENST00000461394 RC3H1Q5TC82 1133 aaKnown RBP8.2□□□□□ -1.1
MSH2-204ENST00000461394 USPL1Q5W0Q7 1092 aa8.2□□□□□ -1.1
MSH2-204ENST00000461394 KRT27Q7Z3Y8 459 aa8.2□□□□□ -1.1
MSH2-204ENST00000461394 MPHOSPH8Q99549 860 aa8.2□□□□□ -1.1
MSH2-204ENST00000461394 GOLIM4O00461 696 aa8.19□□□□□ -1.1
MSH2-204ENST00000461394 RPS6KA4O75676 772 aa8.19□□□□□ -1.1
MSH2-204ENST00000461394 RFC4P35249 363 aa8.19□□□□□ -1.1
MSH2-204ENST00000461394 ZNF772Q68DY9 489 aaPredicted RBP8.19□□□□□ -1.1
MSH2-204ENST00000461394 CLEC4GQ6UXB4 293 aa8.19□□□□□ -1.1
MSH2-204ENST00000461394 FAM196AQ6ZSG2 479 aa8.19□□□□□ -1.1
MSH2-204ENST00000461394 SMIM5Q71RC9 77 aa8.19□□□□□ -1.1
MSH2-204ENST00000461394 NOL8Q76FK4 1167 aaKnown RBP8.19□□□□□ -1.1
MSH2-204ENST00000461394 DDX46Q7L014 1031 aaKnown RBP8.19□□□□□ -1.1
MSH2-204ENST00000461394 EDC3Q96F86 508 aaKnown RBP8.19□□□□□ -1.1
MSH2-204ENST00000461394 SETDB2Q96T68 719 aa8.19□□□□□ -1.1
MSH2-204ENST00000461394 KIF2CQ99661 725 aa8.19□□□□□ -1.1
MSH2-204ENST00000461394 HAUS7Q99871 368 aa8.19□□□□□ -1.1
MSH2-204ENST00000461394 NYXQ9GZU5 481 aa8.19□□□□□ -1.1
MSH2-204ENST00000461394 SRP68Q9UHB9 627 aaKnown RBP8.19□□□□□ -1.1
MSH2-204ENST00000461394 NDUFB9Q9Y6M9 179 aa8.19□□□□□ -1.1
MSH2-204ENST00000461394 RAD50Q92878 1312 aa8.19□□□□□ -1.1
MSH2-204ENST00000461394 MYH7P12883 1935 aa8.19□□□□□ -1.1
MSH2-204ENST00000461394 C4AP0C0L4 1744 aa8.18□□□□□ -1.1
MSH2-204ENST00000461394 TRIM37O94972 964 aa8.18□□□□□ -1.1
MSH2-204ENST00000461394 NTSR2O95665 410 aa8.18□□□□□ -1.1
MSH2-204ENST00000461394 ADORA1P30542 326 aa8.18□□□□□ -1.1
MSH2-204ENST00000461394 NEK4P51957 841 aa8.18□□□□□ -1.1
MSH2-204ENST00000461394 ANAPC15P60006 121 aa8.18□□□□□ -1.1
MSH2-204ENST00000461394 FKBP4Q02790 459 aaKnown RBP eCLIP8.18□□□□□ -1.1
MSH2-204ENST00000461394 LRRFIP1Q32MZ4 808 aaKnown RBP8.18□□□□□ -1.1
MSH2-204ENST00000461394 ERFEQ4G0M1 354 aa8.18□□□□□ -1.1
MSH2-204ENST00000461394 TRAPPC3LQ5T215 181 aa8.18□□□□□ -1.1
MSH2-204ENST00000461394 NBPF5PQ86XG9 351 aaPredicted RBP8.18□□□□□ -1.1
MSH2-204ENST00000461394 XAGE2Q96GT9 111 aa8.18□□□□□ -1.1
MSH2-204ENST00000461394 FAM227BQ96M60 508 aa8.18□□□□□ -1.1
MSH2-204ENST00000461394 PAG1Q9NWQ8 432 aa8.18□□□□□ -1.1
MSH2-204ENST00000461394 CHMP5Q9NZZ3 219 aa8.18□□□□□ -1.1
MSH2-204ENST00000461394 NARFQ9UHQ1 456 aa8.18□□□□□ -1.1
MSH2-204ENST00000461394 MROH5Q6ZUA9 1318 aa8.18□□□□□ -1.1
MSH2-204ENST00000461394 RIC1Q4ADV7 1423 aa8.18□□□□□ -1.1
MSH2-204ENST00000461394 ARAP2Q8WZ64 1704 aa8.17□□□□□ -1.1
MSH2-204ENST00000461394 A0A0D9SFI3 127 aa8.17□□□□□ -1.1
MSH2-204ENST00000461394 EPB41L2O43491 1005 aaKnown RBP8.17□□□□□ -1.1
MSH2-204ENST00000461394 ONECUT3O60422 494 aaPredicted RBP8.17□□□□□ -1.1
MSH2-204ENST00000461394 SLC5A1P13866 664 aa8.17□□□□□ -1.1
MSH2-204ENST00000461394 TBC1D9BQ66K14 1250 aa8.17□□□□□ -1.1
MSH2-204ENST00000461394 PRPF40BQ6NWY9 871 aaKnown RBP8.17□□□□□ -1.1
MSH2-204ENST00000461394 HELBQ8NG08 1087 aaPredicted RBP8.17□□□□□ -1.1
MSH2-204ENST00000461394 CDC5LQ99459 802 aaKnown RBP8.17□□□□□ -1.1
MSH2-204ENST00000461394 LSG1Q9H089 658 aaKnown RBP8.17□□□□□ -1.1
MSH2-204ENST00000461394 SNRKQ9NRH2 765 aa8.17□□□□□ -1.1
MSH2-204ENST00000461394 CCDC171Q6TFL3 1326 aa8.17□□□□□ -1.1
MSH2-204ENST00000461394 RFX7Q2KHR2 1363 aa8.17□□□□□ -1.1
MSH2-204ENST00000461394 COL24A1Q17RW2 1714 aa8.17□□□□□ -1.1
MSH2-204ENST00000461394 TESPA1A2RU30 521 aaPredicted RBP8.16□□□□□ -1.1
MSH2-204ENST00000461394 LRP5O75197 1615 aa8.16□□□□□ -1.1
MSH2-204ENST00000461394 CD2BP2O95400 341 aaKnown RBP8.16□□□□□ -1.1
MSH2-204ENST00000461394 PYGBP11216 843 aa8.16□□□□□ -1.1
MSH2-204ENST00000461394 ZKSCAN1P17029 563 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms