RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 ANKRD18BA2A2Z9 1011 aa24.22■■□□□ 1.47
CCM2-203ENST00000461377 XAGE2Q96GT9 111 aa24.22■■□□□ 1.47
CCM2-203ENST00000461377 HELLSQ9NRZ9 838 aa24.22■■□□□ 1.47
CCM2-203ENST00000461377 LMBRD1Q9NUN5 540 aa24.22■■□□□ 1.47
CCM2-203ENST00000461377 U3KPZ7 1027 aaPredicted RBP24.22■■□□□ 1.47
CCM2-203ENST00000461377 ADORA1P30542 326 aa24.22■■□□□ 1.47
CCM2-203ENST00000461377 KLHL40Q2TBA0 621 aa24.22■■□□□ 1.47
CCM2-203ENST00000461377 CCDC129Q6ZRS4 1044 aa24.22■■□□□ 1.47
CCM2-203ENST00000461377 LARP6Q9BRS8 491 aaKnown RBP24.22■■□□□ 1.47
CCM2-203ENST00000461377 SH2B1Q9NRF2 756 aaPredicted RBP24.22■■□□□ 1.47
CCM2-203ENST00000461377 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.22■■□□□ 1.47
CCM2-203ENST00000461377 LARGE1O95461 756 aa24.21■■□□□ 1.47
CCM2-203ENST00000461377 CCDC158Q5M9N0 1113 aa24.21■■□□□ 1.47
CCM2-203ENST00000461377 SMARCC1Q92922 1105 aaPredicted RBP24.21■■□□□ 1.47
CCM2-203ENST00000461377 ALDH8A1Q9H2A2 487 aaPredicted RBP24.21■■□□□ 1.47
CCM2-203ENST00000461377 TAF6LQ9Y6J9 622 aa24.21■■□□□ 1.47
CCM2-203ENST00000461377 GOLGA6L3A6NEY3 463 aa24.2■■□□□ 1.46
CCM2-203ENST00000461377 ZMYM1Q5SVZ6 1142 aa24.2■■□□□ 1.46
CCM2-203ENST00000461377 MYH3P11055 1940 aa24.2■■□□□ 1.46
CCM2-203ENST00000461377 TTC39AQ5SRH9 613 aa24.2■■□□□ 1.46
CCM2-203ENST00000461377 BLOC1S2Q6QNY1 142 aa24.2■■□□□ 1.46
CCM2-203ENST00000461377 AK7Q96M32 723 aa24.2■■□□□ 1.46
CCM2-203ENST00000461377 RPS6KB1P23443 525 aa24.19■■□□□ 1.46
CCM2-203ENST00000461377 KRT32Q14532 448 aa24.19■■□□□ 1.46
CCM2-203ENST00000461377 LDHAL6AQ6ZMR3 332 aa24.19■■□□□ 1.46
CCM2-203ENST00000461377 LRP5O75197 1615 aa24.19■■□□□ 1.46
CCM2-203ENST00000461377 BCL9LQ86UU0 1499 aa24.19■■□□□ 1.46
CCM2-203ENST00000461377 ABCC12Q96J65 1359 aa24.18■■□□□ 1.46
CCM2-203ENST00000461377 CAMTA2O94983 1202 aa24.18■■□□□ 1.46
CCM2-203ENST00000461377 VPS72Q15906 364 aa24.18■■□□□ 1.46
CCM2-203ENST00000461377 METTL24Q5JXM2 366 aa24.18■■□□□ 1.46
CCM2-203ENST00000461377 GORABQ5T7V8 394 aa24.18■■□□□ 1.46
CCM2-203ENST00000461377 FOXD4L5Q5VV16 416 aaPredicted RBP24.18■■□□□ 1.46
CCM2-203ENST00000461377 FOXD4L4Q8WXT5 416 aaPredicted RBP24.18■■□□□ 1.46
CCM2-203ENST00000461377 DDX49Q9Y6V7 483 aaKnown RBP24.18■■□□□ 1.46
CCM2-203ENST00000461377 WDR33Q9C0J8 1336 aaKnown RBP24.18■■□□□ 1.46
CCM2-203ENST00000461377 UBAP1LF5GYI3 381 aa24.18■■□□□ 1.46
CCM2-203ENST00000461377 COL9A3Q14050 684 aaPredicted RBP24.18■■□□□ 1.46
CCM2-203ENST00000461377 RNF113AO15541 343 aaKnown RBP24.17■■□□□ 1.46
CCM2-203ENST00000461377 ATP2B3Q16720 1220 aa24.17■■□□□ 1.46
CCM2-203ENST00000461377 FAM98CQ17RN3 349 aaKnown RBP24.17■■□□□ 1.46
CCM2-203ENST00000461377 KCNQ2O43526 872 aa24.16■■□□□ 1.46
CCM2-203ENST00000461377 SUSD4Q5VX71 490 aa24.16■■□□□ 1.46
CCM2-203ENST00000461377 VGLL2Q8N8G2 317 aa24.16■■□□□ 1.46
CCM2-203ENST00000461377 ISY1Q9ULR0 285 aaKnown RBP24.16■■□□□ 1.46
CCM2-203ENST00000461377 ST3GAL1Q11201 340 aa24.16■■□□□ 1.46
CCM2-203ENST00000461377 ANKRD1Q15327 319 aa24.16■■□□□ 1.46
CCM2-203ENST00000461377 ME3Q16798 604 aa24.16■■□□□ 1.46
CCM2-203ENST00000461377 CCDC83Q8IWF9 413 aa24.16■■□□□ 1.46
CCM2-203ENST00000461377 DSCC1Q9BVC3 393 aa24.16■■□□□ 1.46
CCM2-203ENST00000461377 CNNM1Q9NRU3 951 aa24.16■■□□□ 1.46
CCM2-203ENST00000461377 SMC3Q9UQE7 1217 aa24.16■■□□□ 1.46
CCM2-203ENST00000461377 ZNF831Q5JPB2 1677 aa24.15■■□□□ 1.46
CCM2-203ENST00000461377 SLFNL1Q499Z3 407 aa24.15■■□□□ 1.46
CCM2-203ENST00000461377 C8orf37Q96NL8 207 aa24.15■■□□□ 1.46
CCM2-203ENST00000461377 TPCN1Q9ULQ1 816 aa24.15■■□□□ 1.46
CCM2-203ENST00000461377 PARP10Q53GL7 1025 aa24.14■■□□□ 1.46
CCM2-203ENST00000461377 CHAMP1Q96JM3 812 aa24.14■■□□□ 1.46
CCM2-203ENST00000461377 UTP14AQ9BVJ6 771 aaKnown RBP24.14■■□□□ 1.46
CCM2-203ENST00000461377 MYH14Q7Z406 1995 aaKnown RBP24.14■■□□□ 1.46
CCM2-203ENST00000461377 MAST3O60307 1309 aa24.14■■□□□ 1.45
CCM2-203ENST00000461377 COL5A3P25940 1745 aaPredicted RBP24.14■■□□□ 1.45
CCM2-203ENST00000461377 PRPF40AO75400 957 aaKnown RBP24.14■■□□□ 1.45
CCM2-203ENST00000461377 CYP21A2P08686 494 aa24.14■■□□□ 1.45
CCM2-203ENST00000461377 FKBP4Q02790 459 aaKnown RBP eCLIP24.14■■□□□ 1.45
CCM2-203ENST00000461377 NGLY1Q96IV0 654 aa24.14■■□□□ 1.45
CCM2-203ENST00000461377 SCARF1Q14162 830 aa24.13■■□□□ 1.45
CCM2-203ENST00000461377 LRRFIP1Q32MZ4 808 aaKnown RBP24.13■■□□□ 1.45
CCM2-203ENST00000461377 TOB2Q14106 344 aaPredicted RBP24.12■■□□□ 1.45
CCM2-203ENST00000461377 ZNF512BQ96KM6 892 aaPredicted RBP24.12■■□□□ 1.45
CCM2-203ENST00000461377 NEK1Q96PY6 1258 aa24.12■■□□□ 1.45
CCM2-203ENST00000461377 BRPF3Q9ULD4 1205 aa24.12■■□□□ 1.45
CCM2-203ENST00000461377 PDE8BO95263 885 aa24.11■■□□□ 1.45
CCM2-203ENST00000461377 ZFYP08048 801 aaPredicted RBP24.11■■□□□ 1.45
CCM2-203ENST00000461377 SYT1P21579 422 aa24.11■■□□□ 1.45
CCM2-203ENST00000461377 ZAP70P43403 619 aa24.11■■□□□ 1.45
CCM2-203ENST00000461377 FNBP4Q8N3X1 1017 aaPredicted RBP24.11■■□□□ 1.45
CCM2-203ENST00000461377 M0R2C6 588 aa24.11■■□□□ 1.45
CCM2-203ENST00000461377 STX6O43752 255 aa24.11■■□□□ 1.45
CCM2-203ENST00000461377 HCLS1P14317 486 aaPredicted RBP24.11■■□□□ 1.45
CCM2-203ENST00000461377 GJB2P29033 226 aa24.11■■□□□ 1.45
CCM2-203ENST00000461377 TCEANC2Q96MN5 208 aa24.11■■□□□ 1.45
CCM2-203ENST00000461377 NTSR2O95665 410 aa24.1■■□□□ 1.45
CCM2-203ENST00000461377 ZSCAN22P10073 491 aaPredicted RBP24.1■■□□□ 1.45
CCM2-203ENST00000461377 HSPD1P10809 573 aaKnown RBP24.1■■□□□ 1.45
CCM2-203ENST00000461377 XRCC6P12956 609 aaKnown RBP eCLIP24.1■■□□□ 1.45
CCM2-203ENST00000461377 MROH5Q6ZUA9 1318 aa24.1■■□□□ 1.45
CCM2-203ENST00000461377 MRE11P49959 708 aa24.09■■□□□ 1.45
CCM2-203ENST00000461377 NECAB1Q8N987 351 aa24.09■■□□□ 1.45
CCM2-203ENST00000461377 GPT2Q8TD30 523 aa24.09■■□□□ 1.45
CCM2-203ENST00000461377 OSBP2Q969R2 916 aa24.09■■□□□ 1.45
CCM2-203ENST00000461377 BCORQ6W2J9 1755 aa24.09■■□□□ 1.45
CCM2-203ENST00000461377 NIP7Q9Y221 180 aaKnown RBP eCLIP24.09■■□□□ 1.45
CCM2-203ENST00000461377 DDX60Q8IY21 1712 aaKnown RBP24.08■■□□□ 1.45
CCM2-203ENST00000461377 MCAMP43121 646 aa24.08■■□□□ 1.45
CCM2-203ENST00000461377 STOX1Q6ZVD7 989 aa24.08■■□□□ 1.45
CCM2-203ENST00000461377 LINC00116Q8NCU8 138 aa24.08■■□□□ 1.45
CCM2-203ENST00000461377 RTL9Q8NET4 1388 aa24.08■■□□□ 1.44
CCM2-203ENST00000461377 FAM177BA6PVY3 158 aa24.07■■□□□ 1.44
CCM2-203ENST00000461377 PI16Q6UXB8 463 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms