RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 RGPD5Q99666 1765 aa9.42□□□□□ -0.9
NUP50-212ENST00000461194 APBA3O96018 575 aa9.42□□□□□ -0.9
NUP50-212ENST00000461194 SKIP12755 728 aa9.42□□□□□ -0.9
NUP50-212ENST00000461194 SMPD1P17405 629 aa9.42□□□□□ -0.9
NUP50-212ENST00000461194 NR5A1Q13285 461 aa9.42□□□□□ -0.9
NUP50-212ENST00000461194 INTS6LQ5JSJ4 861 aaKnown RBP9.42□□□□□ -0.9
NUP50-212ENST00000461194 NBPF6Q5VWK0 638 aa9.42□□□□□ -0.9
NUP50-212ENST00000461194 TBC1D9Q6ZT07 1266 aa9.42□□□□□ -0.9
NUP50-212ENST00000461194 CCDC82Q8N4S0 544 aa9.42□□□□□ -0.9
NUP50-212ENST00000461194 NBPF4Q96M43 638 aa9.42□□□□□ -0.9
NUP50-212ENST00000461194 POLKQ9UBT6 870 aa9.42□□□□□ -0.9
NUP50-212ENST00000461194 SERPINA10Q9UK55 444 aa9.42□□□□□ -0.9
NUP50-212ENST00000461194 KNSTRNQ9Y448 316 aa9.42□□□□□ -0.9
NUP50-212ENST00000461194 LRRC37A3O60309 1634 aa9.42□□□□□ -0.9
NUP50-212ENST00000461194 TNS2Q63HR2 1409 aa9.41□□□□□ -0.9
NUP50-212ENST00000461194 SMG6Q86US8 1419 aaKnown RBP9.41□□□□□ -0.9
NUP50-212ENST00000461194 WASHC2AQ641Q2 1341 aa9.41□□□□□ -0.9
NUP50-212ENST00000461194 PPM1GO15355 546 aaPredicted RBP9.41□□□□□ -0.9
NUP50-212ENST00000461194 NR3C2P08235 984 aa9.41□□□□□ -0.9
NUP50-212ENST00000461194 NNTQ13423 1086 aa9.41□□□□□ -0.9
NUP50-212ENST00000461194 UCN2Q96RP3 112 aa9.41□□□□□ -0.9
NUP50-212ENST00000461194 KIF20BQ96Q89 1820 aa9.4□□□□□ -0.9
NUP50-212ENST00000461194 ERVH48-1M5A8F1 160 aa9.4□□□□□ -0.9
NUP50-212ENST00000461194 EZH2Q15910 746 aaKnown RBP9.4□□□□□ -0.9
NUP50-212ENST00000461194 CCDC116Q8IYX3 515 aa9.4□□□□□ -0.9
NUP50-212ENST00000461194 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.9
NUP50-212ENST00000461194 CAMKK2Q96RR4 588 aa9.4□□□□□ -0.9
NUP50-212ENST00000461194 PPP1R12CQ9BZL4 782 aa9.4□□□□□ -0.9
NUP50-212ENST00000461194 PCDHB11Q9Y5F2 797 aa9.4□□□□□ -0.9
NUP50-212ENST00000461194 PARD3Q8TEW0 1356 aa9.39□□□□□ -0.91
NUP50-212ENST00000461194 PALM3A6NDB9 673 aaPredicted RBP9.39□□□□□ -0.91
NUP50-212ENST00000461194 TNNT2P45379 298 aaPredicted RBP9.39□□□□□ -0.91
NUP50-212ENST00000461194 MORC1Q86VD1 984 aa9.39□□□□□ -0.91
NUP50-212ENST00000461194 HPS1Q92902 700 aa9.39□□□□□ -0.91
NUP50-212ENST00000461194 TMPRSS4Q9NRS4 437 aa9.39□□□□□ -0.91
NUP50-212ENST00000461194 RGPD1P0DJD0 1748 aa9.39□□□□□ -0.91
NUP50-212ENST00000461194 PEAK1Q9H792 1746 aa9.39□□□□□ -0.91
NUP50-212ENST00000461194 FAM187AA6NFU0 413 aa9.38□□□□□ -0.91
NUP50-212ENST00000461194 PLSCR1O15162 318 aa9.38□□□□□ -0.91
NUP50-212ENST00000461194 ATP9BO43861 1147 aa9.38□□□□□ -0.91
NUP50-212ENST00000461194 RFX1P22670 979 aa9.38□□□□□ -0.91
NUP50-212ENST00000461194 DHX9Q08211 1270 aaKnown RBP9.38□□□□□ -0.91
NUP50-212ENST00000461194 PPP1R26Q5T8A7 1209 aaPredicted RBP9.38□□□□□ -0.91
NUP50-212ENST00000461194 PTF1AQ7RTS3 328 aa9.38□□□□□ -0.91
NUP50-212ENST00000461194 USHBP1Q8N6Y0 703 aa9.38□□□□□ -0.91
NUP50-212ENST00000461194 PLPP7Q8NBV4 271 aa9.38□□□□□ -0.91
NUP50-212ENST00000461194 NFATC2IPQ8NCF5 419 aa9.38□□□□□ -0.91
NUP50-212ENST00000461194 ZCRB1Q8TBF4 217 aaKnown RBP9.38□□□□□ -0.91
NUP50-212ENST00000461194 RAPGEF4Q8WZA2 1011 aa9.38□□□□□ -0.91
NUP50-212ENST00000461194 DOLKQ9UPQ8 538 aa9.38□□□□□ -0.91
NUP50-212ENST00000461194 FAM208AQ9UK61 1670 aaKnown RBP9.38□□□□□ -0.91
NUP50-212ENST00000461194 WNK3Q9BYP7 1800 aa9.38□□□□□ -0.91
NUP50-212ENST00000461194 MEGF6O75095 1541 aa9.37□□□□□ -0.91
NUP50-212ENST00000461194 TATP17735 454 aaPredicted RBP9.37□□□□□ -0.91
NUP50-212ENST00000461194 LMOD1P29536 600 aaPredicted RBP9.37□□□□□ -0.91
NUP50-212ENST00000461194 DEPDC4Q8N2C3 294 aa9.37□□□□□ -0.91
NUP50-212ENST00000461194 DDX54Q8TDD1 881 aaKnown RBP9.37□□□□□ -0.91
NUP50-212ENST00000461194 TNS1Q9HBL0 1735 aaKnown RBP9.36□□□□□ -0.91
NUP50-212ENST00000461194 KCNQ2O43526 872 aa9.36□□□□□ -0.91
NUP50-212ENST00000461194 EIF4A2Q14240 407 aaKnown RBP9.36□□□□□ -0.91
NUP50-212ENST00000461194 MAP7D1Q3KQU3 841 aa9.36□□□□□ -0.91
NUP50-212ENST00000461194 OXLD1Q5BKU9 147 aa9.36□□□□□ -0.91
NUP50-212ENST00000461194 NCAPD2Q15021 1401 aa9.36□□□□□ -0.91
NUP50-212ENST00000461194 NPC1L1Q9UHC9 1359 aa9.36□□□□□ -0.91
NUP50-212ENST00000461194 USP17L5A8MUK1 530 aa9.35□□□□□ -0.91
NUP50-212ENST00000461194 NRG2O14511 850 aaPredicted RBP9.35□□□□□ -0.91
NUP50-212ENST00000461194 WDR4P57081 412 aaKnown RBP9.35□□□□□ -0.91
NUP50-212ENST00000461194 CC2D1BQ5T0F9 858 aaKnown RBP9.35□□□□□ -0.91
NUP50-212ENST00000461194 ACSBG1Q96GR2 724 aa9.35□□□□□ -0.91
NUP50-212ENST00000461194 CYLDQ9NQC7 956 aa9.35□□□□□ -0.91
NUP50-212ENST00000461194 PGPEP1Q9NXJ5 209 aa9.35□□□□□ -0.91
NUP50-212ENST00000461194 ANKRD26Q9UPS8 1709 aa9.34□□□□□ -0.91
NUP50-212ENST00000461194 PKDCCQ504Y2 493 aa9.34□□□□□ -0.91
NUP50-212ENST00000461194 TRAF7Q6Q0C0 670 aa9.34□□□□□ -0.91
NUP50-212ENST00000461194 ZNF784Q8NCA9 323 aaPredicted RBP9.34□□□□□ -0.91
NUP50-212ENST00000461194 IRX2Q9BZI1 471 aaPredicted RBP9.34□□□□□ -0.91
NUP50-212ENST00000461194 MAFBQ9Y5Q3 323 aaPredicted RBP9.34□□□□□ -0.91
NUP50-212ENST00000461194 IGSF1Q8N6C5 1336 aa9.33□□□□□ -0.92
NUP50-212ENST00000461194 PCDH11XQ9BZA7 1347 aa9.33□□□□□ -0.92
NUP50-212ENST00000461194 PCDH11YQ9BZA8 1340 aa9.33□□□□□ -0.92
NUP50-212ENST00000461194 USP17L3A6NCW0 530 aa9.33□□□□□ -0.92
NUP50-212ENST00000461194 USP17L4A6NCW7 530 aa9.33□□□□□ -0.92
NUP50-212ENST00000461194 ZIC2O95409 532 aaPredicted RBP9.33□□□□□ -0.92
NUP50-212ENST00000461194 MTHFSP49914 203 aa9.33□□□□□ -0.92
NUP50-212ENST00000461194 USP4Q13107 963 aa9.33□□□□□ -0.92
NUP50-212ENST00000461194 USP17L2Q6R6M4 530 aa9.33□□□□□ -0.92
NUP50-212ENST00000461194 USP17L1Q7RTZ2 530 aa9.33□□□□□ -0.92
NUP50-212ENST00000461194 ITPKCQ96DU7 683 aa9.33□□□□□ -0.92
NUP50-212ENST00000461194 KLF16Q9BXK1 252 aaPredicted RBP9.33□□□□□ -0.92
NUP50-212ENST00000461194 ZFAND3Q9H8U3 227 aa9.33□□□□□ -0.92
NUP50-212ENST00000461194 CYP27B1O15528 508 aa9.32□□□□□ -0.92
NUP50-212ENST00000461194 DGAT1O75907 488 aa9.32□□□□□ -0.92
NUP50-212ENST00000461194 MYCP01106 439 aaPredicted RBP9.32□□□□□ -0.92
NUP50-212ENST00000461194 IL13P35225 146 aa9.32□□□□□ -0.92
NUP50-212ENST00000461194 SCTRP47872 440 aa9.32□□□□□ -0.92
NUP50-212ENST00000461194 NCOA4Q13772 614 aa9.32□□□□□ -0.92
NUP50-212ENST00000461194 LAPTM4AQ15012 233 aa9.32□□□□□ -0.92
NUP50-212ENST00000461194 R3HDM1Q15032 1099 aaKnown RBP9.32□□□□□ -0.92
NUP50-212ENST00000461194 TXNRD1Q16881 649 aa9.32□□□□□ -0.92
NUP50-212ENST00000461194 SPG7Q9UQ90 795 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms