RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 ALDH1B1P30837 517 aa17.27■□□□□ 0.36
CHRD-209ENST00000461120 PRPF38BQ5VTL8 546 aaKnown RBP17.27■□□□□ 0.36
CHRD-209ENST00000461120 GREM2Q9H772 168 aa17.27■□□□□ 0.36
CHRD-209ENST00000461120 SEC31BQ9NQW1 1179 aa17.27■□□□□ 0.36
CHRD-209ENST00000461120 LMNB1P20700 586 aa17.26■□□□□ 0.35
CHRD-209ENST00000461120 TTLL6Q8N841 843 aa17.26■□□□□ 0.35
CHRD-209ENST00000461120 CHMP4BQ9H444 224 aaKnown RBP17.26■□□□□ 0.35
CHRD-209ENST00000461120 TIAM2Q8IVF5 1701 aa17.25■□□□□ 0.35
CHRD-209ENST00000461120 GRAPQ13588 217 aa17.25■□□□□ 0.35
CHRD-209ENST00000461120 PRPF40BQ6NWY9 871 aaKnown RBP17.25■□□□□ 0.35
CHRD-209ENST00000461120 GRAPLQ8TC17 118 aaPredicted RBP17.25■□□□□ 0.35
CHRD-209ENST00000461120 CRBNQ96SW2 442 aa17.25■□□□□ 0.35
CHRD-209ENST00000461120 ZBTB40Q9NUA8 1239 aa17.25■□□□□ 0.35
CHRD-209ENST00000461120 CHMP3Q9Y3E7 222 aa17.25■□□□□ 0.35
CHRD-209ENST00000461120 COL4A1P02462 1669 aa17.25■□□□□ 0.35
CHRD-209ENST00000461120 ITGA6P23229 1130 aa17.24■□□□□ 0.35
CHRD-209ENST00000461120 CELF1Q92879 486 aaKnown RBP17.24■□□□□ 0.35
CHRD-209ENST00000461120 C1orf115Q9H7X2 142 aa17.24■□□□□ 0.35
CHRD-209ENST00000461120 TAF1P21675 1872 aa17.24■□□□□ 0.35
CHRD-209ENST00000461120 SLX4Q8IY92 1834 aa17.24■□□□□ 0.35
CHRD-209ENST00000461120 CACNA1SQ13698 1873 aa17.23■□□□□ 0.35
CHRD-209ENST00000461120 ANKRD18BA2A2Z9 1011 aa17.23■□□□□ 0.35
CHRD-209ENST00000461120 TMEM88BA6NKF7 163 aa17.23■□□□□ 0.35
CHRD-209ENST00000461120 BBOX1O75936 387 aa17.23■□□□□ 0.35
CHRD-209ENST00000461120 RPS8P62241 208 aaKnown RBP17.23■□□□□ 0.35
CHRD-209ENST00000461120 IFIT5Q13325 482 aaKnown RBP17.23■□□□□ 0.35
CHRD-209ENST00000461120 CDC5LQ99459 802 aaKnown RBP17.23■□□□□ 0.35
CHRD-209ENST00000461120 MTX1Q13505 466 aa17.22■□□□□ 0.35
CHRD-209ENST00000461120 CCDC57Q2TAC2 916 aa17.22■□□□□ 0.35
CHRD-209ENST00000461120 PPEF1O14829 653 aaPredicted RBP17.21■□□□□ 0.35
CHRD-209ENST00000461120 ANKRD18AQ8IVF6 992 aa17.21■□□□□ 0.35
CHRD-209ENST00000461120 C7orf43Q8WVR3 580 aa17.21■□□□□ 0.35
CHRD-209ENST00000461120 RFX5P48382 616 aaPredicted RBP17.2■□□□□ 0.34
CHRD-209ENST00000461120 IRX6P78412 446 aaPredicted RBP17.2■□□□□ 0.34
CHRD-209ENST00000461120 DEFB115Q30KQ5 88 aa17.2■□□□□ 0.34
CHRD-209ENST00000461120 TMC4Q7Z404 712 aa17.2■□□□□ 0.34
CHRD-209ENST00000461120 ZNF594Q96JF6 807 aaPredicted RBP17.2■□□□□ 0.34
CHRD-209ENST00000461120 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
CHRD-209ENST00000461120 SRGAP3O43295 1099 aa17.19■□□□□ 0.34
CHRD-209ENST00000461120 C21orf2O43822 256 aa17.19■□□□□ 0.34
CHRD-209ENST00000461120 IGHMBP2P38935 993 aaKnown RBP17.19■□□□□ 0.34
CHRD-209ENST00000461120 ATP8B2P98198 1209 aa17.19■□□□□ 0.34
CHRD-209ENST00000461120 TAF7LQ5H9L4 462 aa17.19■□□□□ 0.34
CHRD-209ENST00000461120 CEP85Q6P2H3 762 aa17.19■□□□□ 0.34
CHRD-209ENST00000461120 SLC51AQ86UW1 340 aa17.19■□□□□ 0.34
CHRD-209ENST00000461120 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
CHRD-209ENST00000461120 GCC1Q96CN9 775 aa17.19■□□□□ 0.34
CHRD-209ENST00000461120 ATP6V0A2Q9Y487 856 aa17.19■□□□□ 0.34
CHRD-209ENST00000461120 PNMA6EA0A0J9YXQ4 647 aa17.18■□□□□ 0.34
CHRD-209ENST00000461120 OLFM4Q6UX06 510 aa17.18■□□□□ 0.34
CHRD-209ENST00000461120 SP8Q8IXZ3 490 aa17.18■□□□□ 0.34
CHRD-209ENST00000461120 BSDC1Q9NW68 430 aaPredicted RBP17.18■□□□□ 0.34
CHRD-209ENST00000461120 DICER1Q9UPY3 1922 aaKnown RBP17.17■□□□□ 0.34
CHRD-209ENST00000461120 SPEF2Q9C093 1822 aa17.17■□□□□ 0.34
CHRD-209ENST00000461120 LRRC37AA6NMS7 1700 aa17.17■□□□□ 0.34
CHRD-209ENST00000461120 POTECB2RU33 542 aa17.17■□□□□ 0.34
CHRD-209ENST00000461120 RASSF7Q02833 373 aa17.17■□□□□ 0.34
CHRD-209ENST00000461120 PTPN12Q05209 780 aaKnown RBP17.17■□□□□ 0.34
CHRD-209ENST00000461120 POLA2Q14181 598 aa17.17■□□□□ 0.34
CHRD-209ENST00000461120 CC2D2BQ6DHV5 1058 aa17.17■□□□□ 0.34
CHRD-209ENST00000461120 RPAP2Q8IXW5 612 aaPredicted RBP17.17■□□□□ 0.34
CHRD-209ENST00000461120 KLHDC4Q8TBB5 520 aa17.17■□□□□ 0.34
CHRD-209ENST00000461120 SSH3Q8TE77 659 aa17.17■□□□□ 0.34
CHRD-209ENST00000461120 MPHOSPH8Q99549 860 aa17.17■□□□□ 0.34
CHRD-209ENST00000461120 CASP8AP2Q9UKL3 1982 aa17.17■□□□□ 0.34
CHRD-209ENST00000461120 CCDC93Q567U6 631 aa17.16■□□□□ 0.34
CHRD-209ENST00000461120 SOGA3Q5TF21 947 aa17.16■□□□□ 0.34
CHRD-209ENST00000461120 LDHAL6AQ6ZMR3 332 aa17.16■□□□□ 0.34
CHRD-209ENST00000461120 MCOLN1Q9GZU1 580 aa17.16■□□□□ 0.34
CHRD-209ENST00000461120 PASKQ96RG2 1323 aa17.16■□□□□ 0.34
CHRD-209ENST00000461120 WDR33Q9C0J8 1336 aaKnown RBP17.16■□□□□ 0.34
CHRD-209ENST00000461120 SNED1Q8TER0 1413 aa17.15■□□□□ 0.34
CHRD-209ENST00000461120 AAMPQ13685 434 aa17.15■□□□□ 0.34
CHRD-209ENST00000461120 SIRT2Q8IXJ6 389 aa17.15■□□□□ 0.34
CHRD-209ENST00000461120 PUS3Q9BZE2 481 aaKnown RBP17.15■□□□□ 0.34
CHRD-209ENST00000461120 TMX4Q9H1E5 349 aaPredicted RBP17.15■□□□□ 0.34
CHRD-209ENST00000461120 COPRSQ9NQ92 184 aa17.15■□□□□ 0.34
CHRD-209ENST00000461120 MINPP1Q9UNW1 487 aa17.15■□□□□ 0.34
CHRD-209ENST00000461120 PA2G4Q9UQ80 394 aaKnown RBP17.15■□□□□ 0.34
CHRD-209ENST00000461120 RASSF10A6NK89 507 aa17.14■□□□□ 0.33
CHRD-209ENST00000461120 CNNM1Q9NRU3 951 aa17.14■□□□□ 0.33
CHRD-209ENST00000461120 PCDHB15Q9Y5E8 787 aa17.14■□□□□ 0.33
CHRD-209ENST00000461120 EYA2O00167 538 aa17.13■□□□□ 0.33
CHRD-209ENST00000461120 GPSM2P81274 684 aa17.13■□□□□ 0.33
CHRD-209ENST00000461120 GRIPAP1Q4V328 841 aa17.13■□□□□ 0.33
CHRD-209ENST00000461120 LRRC24Q50LG9 513 aa17.13■□□□□ 0.33
CHRD-209ENST00000461120 LDHDQ86WU2 507 aa17.13■□□□□ 0.33
CHRD-209ENST00000461120 RTKN2Q8IZC4 609 aa17.13■□□□□ 0.33
CHRD-209ENST00000461120 FBXO3Q9UK99 471 aa17.13■□□□□ 0.33
CHRD-209ENST00000461120 RIPOR2Q9Y4F9 1068 aa17.13■□□□□ 0.33
CHRD-209ENST00000461120 FER1L6Q2WGJ9 1857 aa17.12■□□□□ 0.33
CHRD-209ENST00000461120 HMMRO75330 724 aa17.12■□□□□ 0.33
CHRD-209ENST00000461120 CHRNDQ07001 517 aa17.12■□□□□ 0.33
CHRD-209ENST00000461120 ATG9AQ7Z3C6 839 aa17.12■□□□□ 0.33
CHRD-209ENST00000461120 MPNDQ8N594 471 aa17.12■□□□□ 0.33
CHRD-209ENST00000461120 SIL1Q9H173 461 aa17.12■□□□□ 0.33
CHRD-209ENST00000461120 NSFL1CQ9UNZ2 370 aaKnown RBP17.12■□□□□ 0.33
CHRD-209ENST00000461120 LTBP1Q14766 1721 aa17.11■□□□□ 0.33
CHRD-209ENST00000461120 IQCA1LA6NCM1 817 aa17.11■□□□□ 0.33
CHRD-209ENST00000461120 NFKBIEO00221 500 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms