RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 MAP3K15Q6ZN16 1313 aa15.98■□□□□ 0.15
HDAC4-207ENST00000461113 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
HDAC4-207ENST00000461113 GPTP24298 496 aa15.98■□□□□ 0.15
HDAC4-207ENST00000461113 HSP90AB3PQ58FF7 597 aa15.98■□□□□ 0.15
HDAC4-207ENST00000461113 SAMD7Q7Z3H4 446 aa15.98■□□□□ 0.15
HDAC4-207ENST00000461113 KIAA2012Q0VF49 1180 aa15.97■□□□□ 0.15
HDAC4-207ENST00000461113 PROSER3Q2NL68 480 aa15.97■□□□□ 0.15
HDAC4-207ENST00000461113 TBC1D10BQ4KMP7 808 aaPredicted RBP15.97■□□□□ 0.15
HDAC4-207ENST00000461113 SUSD4Q5VX71 490 aa15.97■□□□□ 0.15
HDAC4-207ENST00000461113 DPP8Q6V1X1 898 aaPredicted RBP15.97■□□□□ 0.15
HDAC4-207ENST00000461113 RIC3Q7Z5B4 369 aa15.97■□□□□ 0.15
HDAC4-207ENST00000461113 ZBTB3Q9H5J0 574 aa15.97■□□□□ 0.15
HDAC4-207ENST00000461113 ZBTB12Q9Y330 459 aaPredicted RBP15.97■□□□□ 0.15
HDAC4-207ENST00000461113 YDJCA8MPS7 323 aa15.96■□□□□ 0.15
HDAC4-207ENST00000461113 EGFRP00533 1210 aa15.96■□□□□ 0.15
HDAC4-207ENST00000461113 TTLL7Q6ZT98 887 aa15.96■□□□□ 0.15
HDAC4-207ENST00000461113 ANKRD13DQ6ZTN6 518 aa15.96■□□□□ 0.15
HDAC4-207ENST00000461113 TRMT2AQ8IZ69 625 aaKnown RBP15.96■□□□□ 0.15
HDAC4-207ENST00000461113 ZNF296Q8WUU4 475 aaPredicted RBP15.96■□□□□ 0.15
HDAC4-207ENST00000461113 UBN2Q6ZU65 1347 aa15.95■□□□□ 0.14
HDAC4-207ENST00000461113 TBC1D8O95759 1140 aa15.95■□□□□ 0.14
HDAC4-207ENST00000461113 FXR1P51114 621 aaKnown RBP eCLIP15.95■□□□□ 0.14
HDAC4-207ENST00000461113 REM2Q8IYK8 340 aaPredicted RBP15.95■□□□□ 0.14
HDAC4-207ENST00000461113 MPNDQ8N594 471 aa15.95■□□□□ 0.14
HDAC4-207ENST00000461113 PLBD2Q8NHP8 589 aa15.95■□□□□ 0.14
HDAC4-207ENST00000461113 DCPSQ96C86 337 aaKnown RBP15.95■□□□□ 0.14
HDAC4-207ENST00000461113 LAMB4A4D0S4 1761 aa15.95■□□□□ 0.14
HDAC4-207ENST00000461113 RBM26Q5T8P6 1007 aaKnown RBP15.94■□□□□ 0.14
HDAC4-207ENST00000461113 GIGYF2Q6Y7W6 1299 aaKnown RBP15.94■□□□□ 0.14
HDAC4-207ENST00000461113 RASAL3Q86YV0 1011 aa15.94■□□□□ 0.14
HDAC4-207ENST00000461113 PIAS4Q8N2W9 510 aaPredicted RBP15.94■□□□□ 0.14
HDAC4-207ENST00000461113 NLRP3Q96P20 1036 aa15.94■□□□□ 0.14
HDAC4-207ENST00000461113 ABCC4O15439 1325 aa15.94■□□□□ 0.14
HDAC4-207ENST00000461113 IBTKQ9P2D0 1353 aaPredicted RBP15.93■□□□□ 0.14
HDAC4-207ENST00000461113 NTSR2O95665 410 aa15.93■□□□□ 0.14
HDAC4-207ENST00000461113 FBXO46Q6PJ61 603 aaPredicted RBP15.93■□□□□ 0.14
HDAC4-207ENST00000461113 LRP10Q7Z4F1 713 aa15.93■□□□□ 0.14
HDAC4-207ENST00000461113 SP8Q8IXZ3 490 aa15.93■□□□□ 0.14
HDAC4-207ENST00000461113 DPF2Q92785 391 aa15.93■□□□□ 0.14
HDAC4-207ENST00000461113 YTHDC1Q96MU7 727 aaKnown RBP15.93■□□□□ 0.14
HDAC4-207ENST00000461113 PSMD14O00487 310 aa15.92■□□□□ 0.14
HDAC4-207ENST00000461113 NEXNQ0ZGT2 675 aa15.92■□□□□ 0.14
HDAC4-207ENST00000461113 FKBP5Q13451 457 aaPredicted RBP15.92■□□□□ 0.14
HDAC4-207ENST00000461113 ALDH1L2Q3SY69 923 aa15.92■□□□□ 0.14
HDAC4-207ENST00000461113 PARP10Q53GL7 1025 aa15.92■□□□□ 0.14
HDAC4-207ENST00000461113 PPP1R42Q7Z4L9 355 aa15.92■□□□□ 0.14
HDAC4-207ENST00000461113 PHAXQ9H814 394 aaKnown RBP15.92■□□□□ 0.14
HDAC4-207ENST00000461113 BBOX1O75936 387 aa15.91■□□□□ 0.14
HDAC4-207ENST00000461113 FLIIQ13045 1269 aa15.91■□□□□ 0.14
HDAC4-207ENST00000461113 TCIRG1Q13488 830 aa15.91■□□□□ 0.14
HDAC4-207ENST00000461113 KSR2Q6VAB6 950 aa15.91■□□□□ 0.14
HDAC4-207ENST00000461113 ZNF34Q8IZ26 560 aa15.91■□□□□ 0.14
HDAC4-207ENST00000461113 CDCA5Q96FF9 252 aa15.91■□□□□ 0.14
HDAC4-207ENST00000461113 SMC4Q9NTJ3 1288 aa15.91■□□□□ 0.14
HDAC4-207ENST00000461113 SULF1Q8IWU6 871 aa15.9■□□□□ 0.14
HDAC4-207ENST00000461113 GPR25O00155 361 aa15.89■□□□□ 0.13
HDAC4-207ENST00000461113 GGA3Q9NZ52 723 aa15.89■□□□□ 0.13
HDAC4-207ENST00000461113 MAP3K2Q9Y2U5 619 aa15.89■□□□□ 0.13
HDAC4-207ENST00000461113 ASTN2O75129 1339 aaPredicted RBP15.89■□□□□ 0.13
HDAC4-207ENST00000461113 PI4KAP2A4QPH2 592 aa15.88■□□□□ 0.13
HDAC4-207ENST00000461113 HSP90B1P14625 803 aaKnown RBP15.88■□□□□ 0.13
HDAC4-207ENST00000461113 KIF4BQ2VIQ3 1234 aa15.88■□□□□ 0.13
HDAC4-207ENST00000461113 SLC10A5Q5PT55 438 aa15.88■□□□□ 0.13
HDAC4-207ENST00000461113 PI4KAP1Q8N8J0 262 aa15.88■□□□□ 0.13
HDAC4-207ENST00000461113 UTP14AQ9BVJ6 771 aaKnown RBP15.88■□□□□ 0.13
HDAC4-207ENST00000461113 DBNDD1Q9H9R9 158 aa15.88■□□□□ 0.13
HDAC4-207ENST00000461113 POTEFA5A3E0 1075 aa15.87■□□□□ 0.13
HDAC4-207ENST00000461113 SSH1Q8WYL5 1049 aa15.87■□□□□ 0.13
HDAC4-207ENST00000461113 MYD88Q99836 296 aa15.87■□□□□ 0.13
HDAC4-207ENST00000461113 METTL22Q9BUU2 404 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-207ENST00000461113 PTPRCP08575 1304 aa15.87■□□□□ 0.13
HDAC4-207ENST00000461113 IPO8O15397 1037 aaKnown RBP15.86■□□□□ 0.13
HDAC4-207ENST00000461113 RPS12P25398 132 aaKnown RBP15.86■□□□□ 0.13
HDAC4-207ENST00000461113 WASHC4Q2M389 1173 aa15.86■□□□□ 0.13
HDAC4-207ENST00000461113 G2E3Q7L622 706 aa15.86■□□□□ 0.13
HDAC4-207ENST00000461113 MRPL50Q8N5N7 158 aaKnown RBP15.86■□□□□ 0.13
HDAC4-207ENST00000461113 DNAAF4Q8WXU2 420 aa15.86■□□□□ 0.13
HDAC4-207ENST00000461113 KCNQ5Q9NR82 932 aa15.86■□□□□ 0.13
HDAC4-207ENST00000461113 TRMT112Q9UI30 125 aaKnown RBP15.86■□□□□ 0.13
HDAC4-207ENST00000461113 ATP5J2-PTCD1G3V325 749 aa15.85■□□□□ 0.13
HDAC4-207ENST00000461113 RIMBP2O15034 1052 aa15.85■□□□□ 0.13
HDAC4-207ENST00000461113 FKTNO75072 461 aa15.85■□□□□ 0.13
HDAC4-207ENST00000461113 HCLS1P14317 486 aaPredicted RBP15.85■□□□□ 0.13
HDAC4-207ENST00000461113 RARSP54136 660 aaKnown RBP15.85■□□□□ 0.13
HDAC4-207ENST00000461113 FKBP1BP68106 108 aa15.85■□□□□ 0.13
HDAC4-207ENST00000461113 TRIM28Q13263 835 aaKnown RBP15.85■□□□□ 0.13
HDAC4-207ENST00000461113 NOM1Q5C9Z4 860 aaKnown RBP15.85■□□□□ 0.13
HDAC4-207ENST00000461113 MOB2Q70IA6 237 aa15.85■□□□□ 0.13
HDAC4-207ENST00000461113 DDX46Q7L014 1031 aaKnown RBP15.85■□□□□ 0.13
HDAC4-207ENST00000461113 NLRP10Q86W26 655 aa15.85■□□□□ 0.13
HDAC4-207ENST00000461113 AKAP11Q9UKA4 1901 aa15.85■□□□□ 0.13
HDAC4-207ENST00000461113 GRAPQ13588 217 aa15.84■□□□□ 0.13
HDAC4-207ENST00000461113 CCDC191Q8NCU4 936 aa15.84■□□□□ 0.13
HDAC4-207ENST00000461113 GRAPLQ8TC17 118 aaPredicted RBP15.84■□□□□ 0.13
HDAC4-207ENST00000461113 ISCA1Q9BUE6 129 aa15.84■□□□□ 0.13
HDAC4-207ENST00000461113 R3HDMLQ9H3Y0 253 aa15.84■□□□□ 0.13
HDAC4-207ENST00000461113 CWC25Q9NXE8 425 aaPredicted RBP15.84■□□□□ 0.13
HDAC4-207ENST00000461113 COLQQ9Y215 455 aaPredicted RBP15.84■□□□□ 0.13
HDAC4-207ENST00000461113 KIF16BQ96L93 1317 aa15.84■□□□□ 0.13
HDAC4-207ENST00000461113 UBE2Q2LH0YL09 131 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms