RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 XYLBO75191 536 aa4.73□□□□□ -1.65
HPS3-203ENST00000460822 MAP3K6O95382 1288 aa4.73□□□□□ -1.65
HPS3-203ENST00000460822 CHRNA4P43681 627 aa4.73□□□□□ -1.65
HPS3-203ENST00000460822 PSAPL1Q6NUJ1 521 aa4.73□□□□□ -1.65
HPS3-203ENST00000460822 C8orf86Q6ZUL3 223 aa4.73□□□□□ -1.65
HPS3-203ENST00000460822 FAM35AQ86V20 835 aa4.73□□□□□ -1.65
HPS3-203ENST00000460822 GLYCTKQ8IVS8 523 aa4.73□□□□□ -1.65
HPS3-203ENST00000460822 EGFL7Q9UHF1 273 aa4.73□□□□□ -1.65
HPS3-203ENST00000460822 PSAPP07602 524 aa4.73□□□□□ -1.65
HPS3-203ENST00000460822 CPB1P15086 417 aa4.73□□□□□ -1.65
HPS3-203ENST00000460822 TARSP26639 723 aaKnown RBP4.73□□□□□ -1.65
HPS3-203ENST00000460822 RAC1P63000 192 aa4.73□□□□□ -1.65
HPS3-203ENST00000460822 ELMSAN1Q6PJG2 1045 aa4.73□□□□□ -1.65
HPS3-203ENST00000460822 DHX32Q7L7V1 743 aaKnown RBP4.73□□□□□ -1.65
HPS3-203ENST00000460822 PIK3R5Q8WYR1 880 aa4.73□□□□□ -1.65
HPS3-203ENST00000460822 USP35Q9P2H5 1018 aa4.73□□□□□ -1.65
HPS3-203ENST00000460822 USP20Q9Y2K6 914 aa4.73□□□□□ -1.65
HPS3-203ENST00000460822 OPLAHO14841 1288 aa4.72□□□□□ -1.65
HPS3-203ENST00000460822 ICMTO60725 284 aa4.72□□□□□ -1.65
HPS3-203ENST00000460822 MTMR3Q13615 1198 aa4.72□□□□□ -1.65
HPS3-203ENST00000460822 ARTNQ5T4W7 220 aa4.72□□□□□ -1.65
HPS3-203ENST00000460822 C20orf204Q6ZNR8 217 aa4.72□□□□□ -1.65
HPS3-203ENST00000460822 ABTB2Q8N961 1025 aa4.72□□□□□ -1.65
HPS3-203ENST00000460822 SAP130Q9H0E3 1048 aa4.72□□□□□ -1.65
HPS3-203ENST00000460822 RBSNQ9H1K0 784 aa4.72□□□□□ -1.65
HPS3-203ENST00000460822 SEPT3Q9UH03 358 aa4.72□□□□□ -1.65
HPS3-203ENST00000460822 FNDC3AQ9Y2H6 1198 aaKnown RBP4.72□□□□□ -1.65
HPS3-203ENST00000460822 GATA4P43694 442 aa4.71□□□□□ -1.66
HPS3-203ENST00000460822 MLLT1Q03111 559 aaPredicted RBP4.71□□□□□ -1.66
HPS3-203ENST00000460822 PLAURQ03405 335 aa4.71□□□□□ -1.66
HPS3-203ENST00000460822 KRTAP19-1Q8IUB9 90 aa4.71□□□□□ -1.66
HPS3-203ENST00000460822 GTF3C2Q8WUA4 911 aaPredicted RBP4.71□□□□□ -1.66
HPS3-203ENST00000460822 FAM229AH3BQW9 127 aa4.71□□□□□ -1.66
HPS3-203ENST00000460822 EGFRP00533 1210 aa4.71□□□□□ -1.66
HPS3-203ENST00000460822 GHRHP01286 108 aa4.71□□□□□ -1.66
HPS3-203ENST00000460822 NID1P14543 1247 aa4.71□□□□□ -1.66
HPS3-203ENST00000460822 MAPK1P28482 360 aa4.71□□□□□ -1.66
HPS3-203ENST00000460822 RSPO4Q2I0M5 234 aaPredicted RBP4.71□□□□□ -1.66
HPS3-203ENST00000460822 FOXD4L6Q3SYB3 417 aaPredicted RBP4.71□□□□□ -1.66
HPS3-203ENST00000460822 FOXD4L3Q6VB84 417 aaPredicted RBP4.71□□□□□ -1.66
HPS3-203ENST00000460822 CAPN12Q6ZSI9 719 aa4.71□□□□□ -1.66
HPS3-203ENST00000460822 TTC16Q8NEE8 873 aa4.71□□□□□ -1.66
HPS3-203ENST00000460822 ZFP64Q9NPA5 681 aa4.71□□□□□ -1.66
HPS3-203ENST00000460822 TLR7Q9NYK1 1049 aaKnown RBP4.71□□□□□ -1.66
HPS3-203ENST00000460822 ZFATQ9P243 1243 aa4.71□□□□□ -1.66
HPS3-203ENST00000460822 STIM2Q9P246 746 aa4.71□□□□□ -1.66
HPS3-203ENST00000460822 UBAP1LF5GYI3 381 aa4.7□□□□□ -1.66
HPS3-203ENST00000460822 EIF2AK2P19525 551 aaKnown RBP4.7□□□□□ -1.66
HPS3-203ENST00000460822 GRNP28799 593 aaKnown RBP4.7□□□□□ -1.66
HPS3-203ENST00000460822 NRLP54845 237 aa4.7□□□□□ -1.66
HPS3-203ENST00000460822 GPLD1P80108 840 aa4.7□□□□□ -1.66
HPS3-203ENST00000460822 ZNF326Q5BKZ1 582 aaKnown RBP4.7□□□□□ -1.66
HPS3-203ENST00000460822 NKAPLQ5M9Q1 402 aa4.7□□□□□ -1.66
HPS3-203ENST00000460822 NLRP13Q86W25 1043 aa4.7□□□□□ -1.66
HPS3-203ENST00000460822 ETFBKMTQ8IXQ9 262 aa4.7□□□□□ -1.66
HPS3-203ENST00000460822 TRPM4Q8TD43 1214 aa4.7□□□□□ -1.66
HPS3-203ENST00000460822 FRRS1LQ9P0K9 344 aa4.7□□□□□ -1.66
HPS3-203ENST00000460822 C9orf172C9J069 976 aa4.69□□□□□ -1.66
HPS3-203ENST00000460822 TCF3P15923 654 aa4.69□□□□□ -1.66
HPS3-203ENST00000460822 PCSK2P16519 638 aa4.69□□□□□ -1.66
HPS3-203ENST00000460822 ZAP70P43403 619 aa4.69□□□□□ -1.66
HPS3-203ENST00000460822 ARHGAP4P98171 946 aa4.69□□□□□ -1.66
HPS3-203ENST00000460822 TAGLNQ01995 201 aaKnown RBP4.69□□□□□ -1.66
HPS3-203ENST00000460822 TTC39BQ5VTQ0 682 aaPredicted RBP4.69□□□□□ -1.66
HPS3-203ENST00000460822 HFE2Q6ZVN8 426 aa4.69□□□□□ -1.66
HPS3-203ENST00000460822 WFDC8Q8IUA0 241 aa4.69□□□□□ -1.66
HPS3-203ENST00000460822 DMRTC2Q8IXT2 367 aaPredicted RBP4.69□□□□□ -1.66
HPS3-203ENST00000460822 GOLGA2P5Q9HBQ8 144 aa4.69□□□□□ -1.66
HPS3-203ENST00000460822 DCTN4Q9UJW0 460 aa4.69□□□□□ -1.66
HPS3-203ENST00000460822 LOC102724428A0A0B4J2F2 783 aa4.69□□□□□ -1.66
HPS3-203ENST00000460822 SCO2A0A1W2PP80 73 aa4.69□□□□□ -1.66
HPS3-203ENST00000460822 AFF1P51825 1210 aaKnown RBP4.69□□□□□ -1.66
HPS3-203ENST00000460822 SIK1P57059 783 aa4.69□□□□□ -1.66
HPS3-203ENST00000460822 ECM1Q16610 540 aa4.69□□□□□ -1.66
HPS3-203ENST00000460822 PERM1Q5SV97 790 aa4.69□□□□□ -1.66
HPS3-203ENST00000460822 GPR152Q8TDT2 470 aa4.69□□□□□ -1.66
HPS3-203ENST00000460822 ASB16Q96NS5 453 aa4.69□□□□□ -1.66
HPS3-203ENST00000460822 SMG9Q9H0W8 520 aaKnown RBP4.69□□□□□ -1.66
HPS3-203ENST00000460822 SHROOM4Q9ULL8 1493 aa4.68□□□□□ -1.66
HPS3-203ENST00000460822 A0A0A0MRY4 1105 aa4.68□□□□□ -1.66
HPS3-203ENST00000460822 ZBTB42B2RXF5 422 aa4.68□□□□□ -1.66
HPS3-203ENST00000460822 MMP20O60882 483 aa4.68□□□□□ -1.66
HPS3-203ENST00000460822 RPLP1P05386 114 aaKnown RBP4.68□□□□□ -1.66
HPS3-203ENST00000460822 FKBP4Q02790 459 aaKnown RBP eCLIP4.68□□□□□ -1.66
HPS3-203ENST00000460822 SF3B2Q13435 895 aaKnown RBP4.68□□□□□ -1.66
HPS3-203ENST00000460822 COL9A3Q14050 684 aaPredicted RBP4.68□□□□□ -1.66
HPS3-203ENST00000460822 GRIK4Q16099 956 aa4.68□□□□□ -1.66
HPS3-203ENST00000460822 MSL1Q68DK7 614 aa4.68□□□□□ -1.66
HPS3-203ENST00000460822 FBXO33Q7Z6M2 555 aa4.68□□□□□ -1.66
HPS3-203ENST00000460822 SPACA7Q96KW9 195 aa4.68□□□□□ -1.66
HPS3-203ENST00000460822 LPIN3Q9BQK8 851 aa4.68□□□□□ -1.66
HPS3-203ENST00000460822 NAGPAQ9UK23 515 aa4.68□□□□□ -1.66
HPS3-203ENST00000460822 KCNMB2Q9Y691 235 aa4.68□□□□□ -1.66
HPS3-203ENST00000460822 TNFRSF10BO14763 440 aa4.67□□□□□ -1.66
HPS3-203ENST00000460822 ELNP15502 786 aa4.67□□□□□ -1.66
HPS3-203ENST00000460822 NRG1Q02297 640 aaPredicted RBP4.67□□□□□ -1.66
HPS3-203ENST00000460822 TTC9Q92623 222 aa4.67□□□□□ -1.66
HPS3-203ENST00000460822 NSUN5Q96P11 429 aaKnown RBP4.67□□□□□ -1.66
HPS3-203ENST00000460822 J3QW42 95 aa4.67□□□□□ -1.66
HPS3-203ENST00000460822 SOX18P35713 384 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms