RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 C11orf91Q3C1V1 193 aa4.5□□□□□ -1.69
PTPN22-203ENST00000460620 TRAPPC3LQ5T215 181 aa4.5□□□□□ -1.69
PTPN22-203ENST00000460620 C8orf86Q6ZUL3 223 aa4.5□□□□□ -1.69
PTPN22-203ENST00000460620 DNAJB12Q9NXW2 375 aaKnown RBP4.5□□□□□ -1.69
PTPN22-203ENST00000460620 IGLV1-40P01703 118 aa4.49□□□□□ -1.69
PTPN22-203ENST00000460620 NFKB1P19838 968 aa4.49□□□□□ -1.69
PTPN22-203ENST00000460620 TBC1D8BQ0IIM8 1120 aa4.49□□□□□ -1.69
PTPN22-203ENST00000460620 DGKZQ13574 1117 aa4.49□□□□□ -1.69
PTPN22-203ENST00000460620 IGFLR1Q9H665 355 aa4.49□□□□□ -1.69
PTPN22-203ENST00000460620 QTRT2Q9H974 415 aaKnown RBP4.49□□□□□ -1.69
PTPN22-203ENST00000460620 JPH1Q9HDC5 661 aaPredicted RBP4.49□□□□□ -1.69
PTPN22-203ENST00000460620 LGR5O75473 907 aa4.48□□□□□ -1.69
PTPN22-203ENST00000460620 RFX1P22670 979 aa4.48□□□□□ -1.69
PTPN22-203ENST00000460620 ARID4AP29374 1257 aaPredicted RBP4.48□□□□□ -1.69
PTPN22-203ENST00000460620 SWI5Q1ZZU3 235 aa4.48□□□□□ -1.69
PTPN22-203ENST00000460620 KLK14Q9P0G3 267 aa4.48□□□□□ -1.69
PTPN22-203ENST00000460620 FRRS1LQ9P0K9 344 aa4.48□□□□□ -1.69
PTPN22-203ENST00000460620 ZNF777Q9ULD5 760 aaPredicted RBP4.48□□□□□ -1.69
PTPN22-203ENST00000460620 A0A0A0MRY4 1105 aa4.48□□□□□ -1.69
PTPN22-203ENST00000460620 RGS9O75916 674 aaPredicted RBP4.48□□□□□ -1.69
PTPN22-203ENST00000460620 MICAL2O94851 1124 aa4.48□□□□□ -1.69
PTPN22-203ENST00000460620 GRNP28799 593 aaKnown RBP4.48□□□□□ -1.69
PTPN22-203ENST00000460620 ELOAQ14241 798 aaKnown RBP4.48□□□□□ -1.69
PTPN22-203ENST00000460620 PSAPL1Q6NUJ1 521 aa4.48□□□□□ -1.69
PTPN22-203ENST00000460620 LCNL1Q6ZST4 164 aa4.48□□□□□ -1.69
PTPN22-203ENST00000460620 AFF1P51825 1210 aaKnown RBP4.47□□□□□ -1.69
PTPN22-203ENST00000460620 ILDR2Q71H61 639 aa4.47□□□□□ -1.69
PTPN22-203ENST00000460620 TRPM4Q8TD43 1214 aa4.47□□□□□ -1.69
PTPN22-203ENST00000460620 NUDT8Q8WV74 236 aa4.47□□□□□ -1.69
PTPN22-203ENST00000460620 TTC9Q92623 222 aa4.47□□□□□ -1.69
PTPN22-203ENST00000460620 NAGPAQ9UK23 515 aa4.47□□□□□ -1.69
PTPN22-203ENST00000460620 NOVA2Q9UNW9 492 aaKnown RBP4.47□□□□□ -1.69
PTPN22-203ENST00000460620 ACIN1Q9UKV3 1341 aaKnown RBP4.47□□□□□ -1.69
PTPN22-203ENST00000460620 EGFRP00533 1210 aa4.46□□□□□ -1.7
PTPN22-203ENST00000460620 GPLD1P80108 840 aa4.46□□□□□ -1.7
PTPN22-203ENST00000460620 DHX32Q7L7V1 743 aaKnown RBP4.46□□□□□ -1.7
PTPN22-203ENST00000460620 FAM35AQ86V20 835 aa4.46□□□□□ -1.7
PTPN22-203ENST00000460620 CILP2Q8IUL8 1156 aa4.46□□□□□ -1.7
PTPN22-203ENST00000460620 DTWD1Q8N5C7 304 aa4.46□□□□□ -1.7
PTPN22-203ENST00000460620 WFDC12Q8WWY7 111 aa4.46□□□□□ -1.7
PTPN22-203ENST00000460620 IFT43Q96FT9 208 aa4.46□□□□□ -1.7
PTPN22-203ENST00000460620 RARAP10276 462 aa4.45□□□□□ -1.7
PTPN22-203ENST00000460620 NRLP54845 237 aa4.45□□□□□ -1.7
PTPN22-203ENST00000460620 FMR1NBQ8N0W7 255 aaPredicted RBP4.45□□□□□ -1.7
PTPN22-203ENST00000460620 COL26A1Q96A83 441 aa4.45□□□□□ -1.7
PTPN22-203ENST00000460620 ZFATQ9P243 1243 aa4.45□□□□□ -1.7
PTPN22-203ENST00000460620 RTCBQ9Y3I0 505 aaKnown RBP4.45□□□□□ -1.7
PTPN22-203ENST00000460620 OPLAHO14841 1288 aa4.45□□□□□ -1.7
PTPN22-203ENST00000460620 CPB1P15086 417 aa4.45□□□□□ -1.7
PTPN22-203ENST00000460620 FKBP5Q13451 457 aaPredicted RBP4.45□□□□□ -1.7
PTPN22-203ENST00000460620 CDCA8Q53HL2 280 aa4.45□□□□□ -1.7
PTPN22-203ENST00000460620 MSL1Q68DK7 614 aa4.45□□□□□ -1.7
PTPN22-203ENST00000460620 LPIN3Q9BQK8 851 aa4.45□□□□□ -1.7
PTPN22-203ENST00000460620 LRFN2Q9ULH4 789 aa4.45□□□□□ -1.7
PTPN22-203ENST00000460620 ZBTB42B2RXF5 422 aa4.44□□□□□ -1.7
PTPN22-203ENST00000460620 SASH3O75995 380 aa4.44□□□□□ -1.7
PTPN22-203ENST00000460620 TARSP26639 723 aaKnown RBP4.44□□□□□ -1.7
PTPN22-203ENST00000460620 CFPP27918 469 aa4.44□□□□□ -1.7
PTPN22-203ENST00000460620 GRIK5Q16478 980 aa4.44□□□□□ -1.7
PTPN22-203ENST00000460620 COX20Q5RI15 118 aa4.44□□□□□ -1.7
PTPN22-203ENST00000460620 PERM1Q5SV97 790 aa4.44□□□□□ -1.7
PTPN22-203ENST00000460620 ELMSAN1Q6PJG2 1045 aa4.44□□□□□ -1.7
PTPN22-203ENST00000460620 KRT25Q7Z3Z0 450 aa4.44□□□□□ -1.7
PTPN22-203ENST00000460620 TREML1Q86YW5 311 aa4.44□□□□□ -1.7
PTPN22-203ENST00000460620 DMRTC2Q8IXT2 367 aaPredicted RBP4.44□□□□□ -1.7
PTPN22-203ENST00000460620 TLR7Q9NYK1 1049 aaKnown RBP4.44□□□□□ -1.7
PTPN22-203ENST00000460620 XYLBO75191 536 aa4.43□□□□□ -1.7
PTPN22-203ENST00000460620 ATG7O95352 703 aa4.43□□□□□ -1.7
PTPN22-203ENST00000460620 HOXD8P13378 290 aaPredicted RBP4.43□□□□□ -1.7
PTPN22-203ENST00000460620 BRD2P25440 801 aaKnown RBP4.43□□□□□ -1.7
PTPN22-203ENST00000460620 OCLNQ16625 522 aa4.43□□□□□ -1.7
PTPN22-203ENST00000460620 SHISA2Q6UWI4 295 aa4.43□□□□□ -1.7
PTPN22-203ENST00000460620 FBXO11Q86XK2 927 aa4.43□□□□□ -1.7
PTPN22-203ENST00000460620 C1QL4Q86Z23 238 aa4.43□□□□□ -1.7
PTPN22-203ENST00000460620 WFDC8Q8IUA0 241 aa4.43□□□□□ -1.7
PTPN22-203ENST00000460620 RELTQ969Z4 430 aa4.43□□□□□ -1.7
PTPN22-203ENST00000460620 MYRFLQ96LU7 910 aa4.43□□□□□ -1.7
PTPN22-203ENST00000460620 PRIMPOLQ96LW4 560 aa4.43□□□□□ -1.7
PTPN22-203ENST00000460620 FAM13BQ9NYF5 915 aa4.43□□□□□ -1.7
PTPN22-203ENST00000460620 ZMIZ1Q9ULJ6 1067 aa4.43□□□□□ -1.7
PTPN22-203ENST00000460620 PRMT3O60678 531 aa4.42□□□□□ -1.7
PTPN22-203ENST00000460620 PSAPP07602 524 aa4.42□□□□□ -1.7
PTPN22-203ENST00000460620 SOX18P35713 384 aa4.42□□□□□ -1.7
PTPN22-203ENST00000460620 PLAURQ03405 335 aa4.42□□□□□ -1.7
PTPN22-203ENST00000460620 FAM69CQ0P6D2 419 aa4.42□□□□□ -1.7
PTPN22-203ENST00000460620 C16orf46Q6P387 395 aa4.42□□□□□ -1.7
PTPN22-203ENST00000460620 CMTR1Q8N1G2 835 aaKnown RBP4.42□□□□□ -1.7
PTPN22-203ENST00000460620 ZSCAN22P10073 491 aaPredicted RBP4.42□□□□□ -1.7
PTPN22-203ENST00000460620 SRPK2P78362 688 aaKnown RBP4.42□□□□□ -1.7
PTPN22-203ENST00000460620 GGNQ86UU5 652 aa4.42□□□□□ -1.7
PTPN22-203ENST00000460620 RGL4Q8IZJ4 473 aa4.42□□□□□ -1.7
PTPN22-203ENST00000460620 CACTIN-AS1Q8N1I8 211 aa4.42□□□□□ -1.7
PTPN22-203ENST00000460620 SMG9Q9H0W8 520 aaKnown RBP4.42□□□□□ -1.7
PTPN22-203ENST00000460620 RBSNQ9H1K0 784 aa4.42□□□□□ -1.7
PTPN22-203ENST00000460620 CXXC1Q9P0U4 656 aaPredicted RBP4.42□□□□□ -1.7
PTPN22-203ENST00000460620 KCNMB2Q9Y691 235 aa4.42□□□□□ -1.7
PTPN22-203ENST00000460620 EIF2AK2P19525 551 aaKnown RBP4.41□□□□□ -1.7
PTPN22-203ENST00000460620 MLLT1Q03111 559 aaPredicted RBP4.41□□□□□ -1.7
PTPN22-203ENST00000460620 IGF2-ASQ6U949 168 aa4.41□□□□□ -1.7
PTPN22-203ENST00000460620 NLRP13Q86W25 1043 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms