RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 CRCPO75575 148 aa18.26■□□□□ 0.51
HDAC7-217ENST00000459625 KRT5P13647 590 aa18.26■□□□□ 0.51
HDAC7-217ENST00000459625 EIF6P56537 245 aaKnown RBP18.26■□□□□ 0.51
HDAC7-217ENST00000459625 FAM169AQ9Y6X4 670 aa18.26■□□□□ 0.51
HDAC7-217ENST00000459625 TEX13AQ9BXU3 409 aaPredicted RBP18.26■□□□□ 0.51
HDAC7-217ENST00000459625 CCDC155Q8N6L0 562 aa18.25■□□□□ 0.51
HDAC7-217ENST00000459625 MARCKSP29966 332 aaPredicted RBP18.25■□□□□ 0.51
HDAC7-217ENST00000459625 CHST3Q7LGC8 479 aa18.25■□□□□ 0.51
HDAC7-217ENST00000459625 MRRFQ96E11 262 aaKnown RBP18.25■□□□□ 0.51
HDAC7-217ENST00000459625 LIMCH1Q9UPQ0 1083 aa18.25■□□□□ 0.51
HDAC7-217ENST00000459625 MAK16Q9BXY0 300 aaKnown RBP18.25■□□□□ 0.51
HDAC7-217ENST00000459625 TXNDC16Q9P2K2 825 aa18.25■□□□□ 0.51
HDAC7-217ENST00000459625 NCOA2Q15596 1464 aa18.25■□□□□ 0.51
HDAC7-217ENST00000459625 SSFA2P28290 1259 aa18.25■□□□□ 0.51
HDAC7-217ENST00000459625 FLIIQ13045 1269 aa18.25■□□□□ 0.51
HDAC7-217ENST00000459625 MAEAQ7L5Y9 396 aa18.25■□□□□ 0.51
HDAC7-217ENST00000459625 USP37Q86T82 979 aa18.25■□□□□ 0.51
HDAC7-217ENST00000459625 SSH1Q8WYL5 1049 aa18.25■□□□□ 0.51
HDAC7-217ENST00000459625 LRPPRCP42704 1394 aaKnown RBP18.25■□□□□ 0.51
HDAC7-217ENST00000459625 MAGEB6P1A0A0J9YX57 407 aa18.24■□□□□ 0.51
HDAC7-217ENST00000459625 UAP1Q16222 522 aaPredicted RBP18.24■□□□□ 0.51
HDAC7-217ENST00000459625 DDB1Q16531 1140 aa18.24■□□□□ 0.51
HDAC7-217ENST00000459625 ZCRB1Q8TBF4 217 aaKnown RBP18.24■□□□□ 0.51
HDAC7-217ENST00000459625 SH2B1Q9NRF2 756 aaPredicted RBP18.24■□□□□ 0.51
HDAC7-217ENST00000459625 DMRT2Q9Y5R5 561 aa18.24■□□□□ 0.51
HDAC7-217ENST00000459625 CCDC25Q86WR0 208 aa18.24■□□□□ 0.51
HDAC7-217ENST00000459625 SELENOSQ9BQE4 189 aa18.24■□□□□ 0.51
HDAC7-217ENST00000459625 ANO3Q9BYT9 981 aa18.24■□□□□ 0.51
HDAC7-217ENST00000459625 C9orf84Q5VXU9 1444 aa18.24■□□□□ 0.51
HDAC7-217ENST00000459625 CCDC172P0C7W6 258 aa18.24■□□□□ 0.51
HDAC7-217ENST00000459625 SPECC1LQ69YQ0 1117 aa18.24■□□□□ 0.51
HDAC7-217ENST00000459625 CCDC114Q96M63 670 aa18.24■□□□□ 0.51
HDAC7-217ENST00000459625 HSF2BPO75031 334 aa18.24■□□□□ 0.51
HDAC7-217ENST00000459625 MCM9Q9NXL9 1143 aa18.24■□□□□ 0.51
HDAC7-217ENST00000459625 RTN1Q16799 776 aa18.24■□□□□ 0.51
HDAC7-217ENST00000459625 LRRC27Q9C0I9 530 aa18.24■□□□□ 0.51
HDAC7-217ENST00000459625 RTCBQ9Y3I0 505 aaKnown RBP18.24■□□□□ 0.51
HDAC7-217ENST00000459625 NOP9Q86U38 636 aaKnown RBP18.23■□□□□ 0.51
HDAC7-217ENST00000459625 GPATCH11Q8N954 259 aa18.23■□□□□ 0.51
HDAC7-217ENST00000459625 ALG1Q9BT22 464 aa18.23■□□□□ 0.51
HDAC7-217ENST00000459625 RBM27Q9P2N5 1060 aaKnown RBP18.23■□□□□ 0.51
HDAC7-217ENST00000459625 B4DLN1 442 aa18.23■□□□□ 0.51
HDAC7-217ENST00000459625 MCM4P33991 863 aa18.23■□□□□ 0.51
HDAC7-217ENST00000459625 MRPL12P52815 198 aaKnown RBP18.23■□□□□ 0.51
HDAC7-217ENST00000459625 GTF2F1P35269 517 aaKnown RBP eCLIP18.23■□□□□ 0.512e-7■■■■□ 23.7
HDAC7-217ENST00000459625 BBXQ8WY36 941 aaPredicted RBP18.23■□□□□ 0.51
HDAC7-217ENST00000459625 PICK1Q9NRD5 415 aa18.23■□□□□ 0.51
HDAC7-217ENST00000459625 DDX39AO00148 427 aaKnown RBP18.23■□□□□ 0.51
HDAC7-217ENST00000459625 LPXNO60711 386 aa18.23■□□□□ 0.51
HDAC7-217ENST00000459625 NBPF7P0C2Y1 421 aaPredicted RBP18.23■□□□□ 0.51
HDAC7-217ENST00000459625 ERCC5P28715 1186 aaPredicted RBP18.23■□□□□ 0.51
HDAC7-217ENST00000459625 CFAP57Q96MR6 1250 aa18.23■□□□□ 0.51
HDAC7-217ENST00000459625 SNRPA1P09661 255 aaKnown RBP18.22■□□□□ 0.51
HDAC7-217ENST00000459625 KMT5BQ4FZB7 885 aa18.22■□□□□ 0.51
HDAC7-217ENST00000459625 CCDC102BQ68D86 513 aa18.22■□□□□ 0.51
HDAC7-217ENST00000459625 MICALCLQ6ZW33 695 aa18.22■□□□□ 0.51
HDAC7-217ENST00000459625 ZBTB43O43298 467 aa18.22■□□□□ 0.51
HDAC7-217ENST00000459625 MCM7P33993 719 aa18.22■□□□□ 0.51
HDAC7-217ENST00000459625 ZBTB16Q05516 673 aa18.22■□□□□ 0.51
HDAC7-217ENST00000459625 CKAP4Q07065 602 aaKnown RBP18.22■□□□□ 0.51
HDAC7-217ENST00000459625 STX1AQ16623 288 aa18.22■□□□□ 0.51
HDAC7-217ENST00000459625 DHX58Q96C10 678 aa18.22■□□□□ 0.51
HDAC7-217ENST00000459625 IFI16Q16666 785 aaKnown RBP18.22■□□□□ 0.51
HDAC7-217ENST00000459625 DCAF17Q5H9S7 520 aaPredicted RBP18.22■□□□□ 0.51
HDAC7-217ENST00000459625 RXRAP19793 462 aa18.22■□□□□ 0.51
HDAC7-217ENST00000459625 ANKRD13DQ6ZTN6 518 aa18.22■□□□□ 0.51
HDAC7-217ENST00000459625 ZGPATQ8N5A5 531 aaKnown RBP18.22■□□□□ 0.51
HDAC7-217ENST00000459625 CCT6BQ92526 530 aa18.22■□□□□ 0.51
HDAC7-217ENST00000459625 SORBS3O60504 671 aa18.21■□□□□ 0.51
HDAC7-217ENST00000459625 UQCRFS1P1P0C7P4 283 aa18.21■□□□□ 0.51
HDAC7-217ENST00000459625 DZIP3Q86Y13 1208 aaKnown RBP18.21■□□□□ 0.51
HDAC7-217ENST00000459625 RRP36Q96EU6 259 aaKnown RBP18.21■□□□□ 0.51
HDAC7-217ENST00000459625 TTC12Q9H892 705 aaPredicted RBP18.21■□□□□ 0.51
HDAC7-217ENST00000459625 GPCPD1Q9NPB8 672 aa18.21■□□□□ 0.51
HDAC7-217ENST00000459625 TMOD4Q9NZQ9 345 aa18.21■□□□□ 0.51
HDAC7-217ENST00000459625 CHPF2Q9P2E5 772 aa18.21■□□□□ 0.51
HDAC7-217ENST00000459625 MCM5P33992 734 aa18.21■□□□□ 0.51
HDAC7-217ENST00000459625 KIFC2Q96AC6 838 aa18.21■□□□□ 0.51
HDAC7-217ENST00000459625 CAPZA3Q96KX2 299 aa18.21■□□□□ 0.51
HDAC7-217ENST00000459625 TRIM6Q9C030 488 aaPredicted RBP18.21■□□□□ 0.51
HDAC7-217ENST00000459625 MYCLP12524 364 aaPredicted RBP18.21■□□□□ 0.51
HDAC7-217ENST00000459625 ZNF710Q8N1W2 664 aa18.21■□□□□ 0.51
HDAC7-217ENST00000459625 MAGEB6Q8N7X4 407 aa18.21■□□□□ 0.51
HDAC7-217ENST00000459625 XAGE3Q8WTP9 111 aa18.21■□□□□ 0.51
HDAC7-217ENST00000459625 KIF4AO95239 1232 aa18.21■□□□□ 0.5
HDAC7-217ENST00000459625 SYKP43405 635 aa18.21■□□□□ 0.5
HDAC7-217ENST00000459625 GNG11P61952 73 aa18.21■□□□□ 0.5
HDAC7-217ENST00000459625 ECHDC1Q9NTX5 307 aa18.21■□□□□ 0.5
HDAC7-217ENST00000459625 ESR2Q92731 530 aa18.2■□□□□ 0.5
HDAC7-217ENST00000459625 ZKSCAN3Q9BRR0 538 aa18.2■□□□□ 0.5
HDAC7-217ENST00000459625 BIRC3Q13489 604 aa18.2■□□□□ 0.5
HDAC7-217ENST00000459625 FCHSD1Q86WN1 690 aa18.2■□□□□ 0.5
HDAC7-217ENST00000459625 CCDC24Q8N4L8 307 aa18.2■□□□□ 0.5
HDAC7-217ENST00000459625 SLC9C2Q5TAH2 1124 aa18.2■□□□□ 0.5
HDAC7-217ENST00000459625 PLVAPQ9BX97 442 aa18.2■□□□□ 0.5
HDAC7-217ENST00000459625 KRT23Q9C075 422 aa18.2■□□□□ 0.5
HDAC7-217ENST00000459625 ANAPC4Q9UJX5 808 aa18.2■□□□□ 0.5
HDAC7-217ENST00000459625 TTLL3Q9Y4R7 772 aa18.2■□□□□ 0.5
HDAC7-217ENST00000459625 CEP83Q9Y592 693 aa18.2■□□□□ 0.5
HDAC7-217ENST00000459625 CFTRP13569 1480 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms