RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 NUP62CLQ9H1M0 184 aa24.47■■□□□ 1.51
CRAT-207ENST00000458362 UBR2Q8IWV8 1755 aa24.47■■□□□ 1.51
CRAT-207ENST00000458362 PALLDQ8WX93 1383 aa24.47■■□□□ 1.51
CRAT-207ENST00000458362 A1BGP04217 495 aa24.46■■□□□ 1.51
CRAT-207ENST00000458362 HSP90B1P14625 803 aaKnown RBP24.46■■□□□ 1.51
CRAT-207ENST00000458362 PLCB2Q00722 1185 aa24.46■■□□□ 1.51
CRAT-207ENST00000458362 SCAND2PQ9GZW5 306 aaPredicted RBP24.46■■□□□ 1.51
CRAT-207ENST00000458362 CWC25Q9NXE8 425 aaPredicted RBP24.46■■□□□ 1.51
CRAT-207ENST00000458362 PRKCSHP14314 528 aaPredicted RBP24.46■■□□□ 1.51
CRAT-207ENST00000458362 RESTQ13127 1097 aa24.46■■□□□ 1.51
CRAT-207ENST00000458362 MAP3K11Q16584 847 aa24.45■■□□□ 1.5
CRAT-207ENST00000458362 ZNF594Q96JF6 807 aaPredicted RBP24.45■■□□□ 1.5
CRAT-207ENST00000458362 PAG1Q9NWQ8 432 aa24.45■■□□□ 1.5
CRAT-207ENST00000458362 UQCRHLA0A096LP55 91 aa24.45■■□□□ 1.5
CRAT-207ENST00000458362 UQCRHP07919 91 aa24.45■■□□□ 1.5
CRAT-207ENST00000458362 LRRC24Q50LG9 513 aa24.45■■□□□ 1.5
CRAT-207ENST00000458362 DDX11Q96FC9 970 aa24.45■■□□□ 1.5
CRAT-207ENST00000458362 DACT1Q9NYF0 836 aa24.45■■□□□ 1.5
CRAT-207ENST00000458362 MRVI1Q9Y6F6 885 aa24.45■■□□□ 1.5
CRAT-207ENST00000458362 A0A0G2JLW4 131 aa24.44■■□□□ 1.5
CRAT-207ENST00000458362 SCRN1Q12765 414 aa24.44■■□□□ 1.5
CRAT-207ENST00000458362 C17orf53Q8N3J3 647 aaPredicted RBP24.44■■□□□ 1.5
CRAT-207ENST00000458362 ZBTB3Q9H5J0 574 aa24.44■■□□□ 1.5
CRAT-207ENST00000458362 KCPQ6ZWJ8 1503 aa24.44■■□□□ 1.5
CRAT-207ENST00000458362 PGBD1Q96JS3 809 aa24.44■■□□□ 1.5
CRAT-207ENST00000458362 TYRO3Q06418 890 aa24.43■■□□□ 1.5
CRAT-207ENST00000458362 PIBF1Q8WXW3 757 aa24.43■■□□□ 1.5
CRAT-207ENST00000458362 CKAP2LQ8IYA6 745 aa24.42■■□□□ 1.5
CRAT-207ENST00000458362 UBE2Q2Q8WVN8 375 aa24.42■■□□□ 1.5
CRAT-207ENST00000458362 GPR108Q9NPR9 543 aa24.42■■□□□ 1.5
CRAT-207ENST00000458362 ZMYM1Q5SVZ6 1142 aa24.42■■□□□ 1.5
CRAT-207ENST00000458362 SASS6Q6UVJ0 657 aa24.42■■□□□ 1.5
CRAT-207ENST00000458362 ZCRB1Q8TBF4 217 aaKnown RBP24.42■■□□□ 1.5
CRAT-207ENST00000458362 HELLSQ9NRZ9 838 aa24.42■■□□□ 1.5
CRAT-207ENST00000458362 PCDH11XQ9BZA7 1347 aa24.41■■□□□ 1.5
CRAT-207ENST00000458362 PCDH11YQ9BZA8 1340 aa24.41■■□□□ 1.5
CRAT-207ENST00000458362 GOLGA6L4A6NEF3 574 aa24.41■■□□□ 1.5
CRAT-207ENST00000458362 IL15P40933 162 aaPredicted RBP24.41■■□□□ 1.5
CRAT-207ENST00000458362 RBM10P98175 930 aaKnown RBP24.41■■□□□ 1.5
CRAT-207ENST00000458362 PAPPAQ13219 1627 aa24.41■■□□□ 1.5
CRAT-207ENST00000458362 PFKFB2O60825 505 aa24.41■■□□□ 1.5
CRAT-207ENST00000458362 SMARCC2Q8TAQ2 1214 aa24.41■■□□□ 1.5
CRAT-207ENST00000458362 PUS3Q9BZE2 481 aaKnown RBP24.41■■□□□ 1.5
CRAT-207ENST00000458362 TNMDQ9H2S6 317 aa24.41■■□□□ 1.5
CRAT-207ENST00000458362 EYA2O00167 538 aa24.4■■□□□ 1.5
CRAT-207ENST00000458362 DHX32Q7L7V1 743 aaKnown RBP24.4■■□□□ 1.5
CRAT-207ENST00000458362 FAM200AQ8TCP9 573 aa24.4■■□□□ 1.5
CRAT-207ENST00000458362 CLSTN2Q9H4D0 955 aa24.4■■□□□ 1.5
CRAT-207ENST00000458362 APOBRQ0VD83 1088 aa24.4■■□□□ 1.5
CRAT-207ENST00000458362 NOLC1Q14978 699 aaKnown RBP eCLIP24.4■■□□□ 1.5
CRAT-207ENST00000458362 DSCC1Q9BVC3 393 aa24.4■■□□□ 1.5
CRAT-207ENST00000458362 MYH15Q9Y2K3 1946 aa24.39■■□□□ 1.5
CRAT-207ENST00000458362 NR1I2O75469 434 aa24.39■■□□□ 1.5
CRAT-207ENST00000458362 CTDNEP1O95476 244 aa24.39■■□□□ 1.5
CRAT-207ENST00000458362 FGD1P98174 961 aa24.39■■□□□ 1.5
CRAT-207ENST00000458362 NSUN7Q8NE18 718 aaKnown RBP24.39■■□□□ 1.5
CRAT-207ENST00000458362 MAST3O60307 1309 aa24.39■■□□□ 1.49
CRAT-207ENST00000458362 WDR17Q8IZU2 1322 aa24.39■■□□□ 1.49
CRAT-207ENST00000458362 H3BQV1 296 aa24.38■■□□□ 1.49
CRAT-207ENST00000458362 EXOSC10Q01780 885 aaKnown RBP24.38■■□□□ 1.49
CRAT-207ENST00000458362 IFFO2Q5TF58 517 aa24.38■■□□□ 1.49
CRAT-207ENST00000458362 RBM43Q6ZSC3 357 aaKnown RBP24.38■■□□□ 1.49
CRAT-207ENST00000458362 LUZP1Q86V48 1076 aa24.38■■□□□ 1.49
CRAT-207ENST00000458362 CCDC191Q8NCU4 936 aa24.38■■□□□ 1.49
CRAT-207ENST00000458362 DDX19AQ9NUU7 478 aaKnown RBP24.38■■□□□ 1.49
CRAT-207ENST00000458362 ERVV-2B6SEH9 535 aa24.38■■□□□ 1.49
CRAT-207ENST00000458362 FOSBP53539 338 aa24.38■■□□□ 1.49
CRAT-207ENST00000458362 TOM1L2Q6ZVM7 507 aa24.38■■□□□ 1.49
CRAT-207ENST00000458362 KCNF1Q9H3M0 494 aa24.38■■□□□ 1.49
CRAT-207ENST00000458362 A0A1B0GUL7 405 aa24.37■■□□□ 1.49
CRAT-207ENST00000458362 HMGB1P09429 215 aaKnown RBP24.37■■□□□ 1.49
CRAT-207ENST00000458362 HSPD1P10809 573 aaKnown RBP24.37■■□□□ 1.49
CRAT-207ENST00000458362 IFIT1P09914 478 aaKnown RBP24.37■■□□□ 1.49
CRAT-207ENST00000458362 ANO6Q4KMQ2 910 aa24.37■■□□□ 1.49
CRAT-207ENST00000458362 SPC24Q8NBT2 197 aa24.37■■□□□ 1.49
CRAT-207ENST00000458362 LLPHQ9BRT6 129 aaKnown RBP24.37■■□□□ 1.49
CRAT-207ENST00000458362 E7EWF7 191 aa24.36■■□□□ 1.49
CRAT-207ENST00000458362 RNF113AO15541 343 aaKnown RBP24.36■■□□□ 1.49
CRAT-207ENST00000458362 BICD2Q8TD16 824 aa24.36■■□□□ 1.49
CRAT-207ENST00000458362 CBX8Q9HC52 389 aa24.36■■□□□ 1.49
CRAT-207ENST00000458362 PRDM11Q9NQV5 511 aa24.36■■□□□ 1.49
CRAT-207ENST00000458362 SHANK3Q9BYB0 1731 aa24.36■■□□□ 1.49
CRAT-207ENST00000458362 M0R2C6 588 aa24.36■■□□□ 1.49
CRAT-207ENST00000458362 ADD1P35611 737 aaKnown RBP24.36■■□□□ 1.49
CRAT-207ENST00000458362 ZSCAN16Q9H4T2 348 aaPredicted RBP24.36■■□□□ 1.49
CRAT-207ENST00000458362 PTPDC1A2A3K4 754 aa24.35■■□□□ 1.49
CRAT-207ENST00000458362 CIAO1O76071 339 aa24.35■■□□□ 1.49
CRAT-207ENST00000458362 CCT2P78371 535 aaKnown RBP24.35■■□□□ 1.49
CRAT-207ENST00000458362 AGXT2Q9BYV1 514 aa24.35■■□□□ 1.49
CRAT-207ENST00000458362 SPTLC3Q9NUV7 552 aa24.35■■□□□ 1.49
CRAT-207ENST00000458362 TTLL5Q6EMB2 1281 aa24.35■■□□□ 1.49
CRAT-207ENST00000458362 NCOA5Q9HCD5 579 aaKnown RBP24.35■■□□□ 1.49
CRAT-207ENST00000458362 SPEF2Q9C093 1822 aa24.34■■□□□ 1.49
CRAT-207ENST00000458362 CEBPZQ03701 1054 aaKnown RBP24.34■■□□□ 1.49
CRAT-207ENST00000458362 NKX1-1Q15270 411 aaPredicted RBP24.34■■□□□ 1.49
CRAT-207ENST00000458362 DNTTIP2Q5QJE6 756 aaKnown RBP24.34■■□□□ 1.49
CRAT-207ENST00000458362 CHST3Q7LGC8 479 aa24.34■■□□□ 1.49
CRAT-207ENST00000458362 PYCARDQ9ULZ3 195 aa24.34■■□□□ 1.49
CRAT-207ENST00000458362 FTOQ9C0B1 505 aaKnown RBP eCLIP24.33■■□□□ 1.49
CRAT-207ENST00000458362 XIRP1Q702N8 1843 aaKnown RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms