RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 TMC7Q7Z402 723 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 TMTC2Q8N394 836 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 VWA5B2Q8N398 1253 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 EVI5LQ96CN4 794 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 XAGE2Q96GT9 111 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 ZNF594Q96JF6 807 aaPredicted RBP6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 NLRP3Q96P20 1036 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 ESYT1Q9BSJ8 1104 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 RBCK1Q9BYM8 510 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 RAB6BQ9NRW1 208 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 DOLKQ9UPQ8 538 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 DNMT3AQ9Y6K1 912 aaPredicted RBP6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 ARHGEF11O15085 1522 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 AKNAQ7Z591 1439 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 ADGBQ8N7X0 1667 aa6.33□□□□□ -1.4
SPARCL1-204ENST00000458304 ZCCHC11Q5TAX3 1644 aaKnown RBP6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 ANKRD30AQ9BXX3 1397 aa6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 ARHGAP5Q13017 1502 aa6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 TREHO43280 583 aa6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 MYCP01106 439 aaPredicted RBP6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 POU4F2Q12837 409 aa6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 FOXD4L6Q3SYB3 417 aaPredicted RBP6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 RNFT1Q5M7Z0 435 aa6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 EFCAB2Q5VUJ9 269 aa6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 FOXD4L3Q6VB84 417 aaPredicted RBP6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 SV2AQ7L0J3 742 aa6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 NME8Q8N427 588 aa6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 GPATCH11Q8N954 259 aa6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 CNKSR1Q969H4 720 aa6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 PRIMPOLQ96LW4 560 aa6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 DUSP9Q99956 384 aaKnown RBP6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 COL25A1Q9BXS0 654 aaPredicted RBP6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 PRDM10Q9NQV6 1147 aa6.32□□□□□ -1.4
SPARCL1-204ENST00000458304 ROCK1Q13464 1354 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 KDM5BQ9UGL1 1544 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 CDC14CA4D256 554 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 PPP1R12AO14974 1030 aaPredicted RBP6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 DAB2P98082 770 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 CENPCQ03188 943 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 USP4Q13107 963 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 PSMD2Q13200 908 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 BIRC2Q13490 618 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 SLC27A3Q5K4L6 730 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 VPS37DQ86XT2 251 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 TRIM50Q86XT4 487 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 MCF2L2Q86YR7 1114 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 FMNL3Q8IVF7 1028 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 PLPP7Q8NBV4 271 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 STAG1Q8WVM7 1258 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 CNTNAP3BQ96NU0 1288 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 CNTNAP3Q9BZ76 1288 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 FHDC1Q9C0D6 1143 aaPredicted RBP6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 TMX1Q9H3N1 280 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 SEPT3Q9UH03 358 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 PRKAB1Q9Y478 270 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 DNMT1P26358 1616 aaKnown RBP6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 HFM1A2PYH4 1435 aa6.31□□□□□ -1.4
SPARCL1-204ENST00000458304 GCC2Q8IWJ2 1684 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 CAMSAP2Q08AD1 1489 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 WDR7Q9Y4E6 1490 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 PREX2Q70Z35 1606 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 K7ELQ4 463 aaPredicted RBP6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 PRC1O43663 620 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 STAU1O95793 577 aaKnown RBP6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 ATP1A2P50993 1020 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 RHBDL3P58872 404 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 CLDN10P78369 228 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 MTMR3Q13615 1198 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 MAP7D1Q3KQU3 841 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 C4orf46Q504U0 113 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 OXLD1Q5BKU9 147 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 WDR44Q5JSH3 913 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 ZFYVE27Q5T4F4 411 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 NBPF10Q6P3W6 841 aaKnown RBP6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 ZNF654Q8IZM8 581 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 NBPF15Q8N660 670 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 ESF1Q9H501 851 aaKnown RBP6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 DNAAF2Q9NVR5 837 aaKnown RBP6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 PRR12Q9ULL5 1215 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 DYRK1BQ9Y463 629 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 CDC42BPAQ5VT25 1732 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 RAB3GAP2Q9H2M9 1393 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 ARAP3Q8WWN8 1544 aa6.3□□□□□ -1.4
SPARCL1-204ENST00000458304 SHANK2Q9UPX8 1470 aa6.29□□□□□ -1.4
SPARCL1-204ENST00000458304 WASLO00401 505 aaPredicted RBP6.29□□□□□ -1.4
SPARCL1-204ENST00000458304 NDUFB5O43674 189 aa6.29□□□□□ -1.4
SPARCL1-204ENST00000458304 FGRP09769 529 aa6.29□□□□□ -1.4
SPARCL1-204ENST00000458304 PAX3P23760 479 aa6.29□□□□□ -1.4
SPARCL1-204ENST00000458304 SCNN1DP51172 638 aa6.29□□□□□ -1.4
SPARCL1-204ENST00000458304 DAPK1P53355 1430 aa6.29□□□□□ -1.4
SPARCL1-204ENST00000458304 EML3Q32P44 896 aa6.29□□□□□ -1.4
SPARCL1-204ENST00000458304 JDP2Q8WYK2 163 aa6.29□□□□□ -1.4
SPARCL1-204ENST00000458304 ZNF837Q96EG3 531 aaPredicted RBP6.29□□□□□ -1.4
SPARCL1-204ENST00000458304 MAF1Q9H063 256 aa6.29□□□□□ -1.4
SPARCL1-204ENST00000458304 ETNK1Q9HBU6 452 aa6.29□□□□□ -1.4
SPARCL1-204ENST00000458304 TYW1Q9NV66 732 aaKnown RBP6.29□□□□□ -1.4
SPARCL1-204ENST00000458304 GEMIN8Q9NWZ8 242 aaKnown RBP6.29□□□□□ -1.4
SPARCL1-204ENST00000458304 DDX41Q9UJV9 622 aaKnown RBP6.29□□□□□ -1.4
SPARCL1-204ENST00000458304 MAGI3Q5TCQ9 1506 aa6.29□□□□□ -1.4
SPARCL1-204ENST00000458304 GPATCH8Q9UKJ3 1502 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms