RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 ETNK1Q9HBU6 452 aa6.83□□□□□ -1.32
HMGB4-202ENST00000458277 MRS2Q9HD23 443 aa6.83□□□□□ -1.32
HMGB4-202ENST00000458277 STARD13Q9Y3M8 1113 aa6.83□□□□□ -1.32
HMGB4-202ENST00000458277 POLA1P09884 1462 aaPredicted RBP6.82□□□□□ -1.32
HMGB4-202ENST00000458277 FGD5Q6ZNL6 1462 aa6.82□□□□□ -1.32
HMGB4-202ENST00000458277 GOLIM4O00461 696 aa6.82□□□□□ -1.32
HMGB4-202ENST00000458277 HSP90AB1P08238 724 aaKnown RBP6.82□□□□□ -1.32
HMGB4-202ENST00000458277 NID1P14543 1247 aa6.82□□□□□ -1.32
HMGB4-202ENST00000458277 LIG1P18858 919 aa6.82□□□□□ -1.32
HMGB4-202ENST00000458277 NASPP49321 788 aaPredicted RBP6.82□□□□□ -1.32
HMGB4-202ENST00000458277 IRAK1P51617 712 aa6.82□□□□□ -1.32
HMGB4-202ENST00000458277 NBPF6Q5VWK0 638 aa6.82□□□□□ -1.32
HMGB4-202ENST00000458277 SHISA2Q6UWI4 295 aa6.82□□□□□ -1.32
HMGB4-202ENST00000458277 NBPF5PQ86XG9 351 aaPredicted RBP6.82□□□□□ -1.32
HMGB4-202ENST00000458277 MICALL1Q8N3F8 863 aa6.82□□□□□ -1.32
HMGB4-202ENST00000458277 NBPF4Q96M43 638 aa6.82□□□□□ -1.32
HMGB4-202ENST00000458277 MDFIQ99750 246 aa6.82□□□□□ -1.32
HMGB4-202ENST00000458277 PAIP2Q9BPZ3 127 aaKnown RBP6.82□□□□□ -1.32
HMGB4-202ENST00000458277 TACO1Q9BSH4 297 aaKnown RBP6.82□□□□□ -1.32
HMGB4-202ENST00000458277 GJA3Q9Y6H8 435 aa6.82□□□□□ -1.32
HMGB4-202ENST00000458277 WDR97A6NE52 1622 aa6.82□□□□□ -1.32
HMGB4-202ENST00000458277 CNTLNQ9NXG0 1405 aa6.82□□□□□ -1.32
HMGB4-202ENST00000458277 E9PSI1 815 aa6.81□□□□□ -1.32
HMGB4-202ENST00000458277 FAM157BP0CG42 384 aa6.81□□□□□ -1.32
HMGB4-202ENST00000458277 UBTFP17480 764 aaKnown RBP6.81□□□□□ -1.32
HMGB4-202ENST00000458277 MCCD1P59942 119 aaPredicted RBP6.81□□□□□ -1.32
HMGB4-202ENST00000458277 CBX1P83916 185 aa6.81□□□□□ -1.32
HMGB4-202ENST00000458277 OS9Q13438 667 aaPredicted RBP6.81□□□□□ -1.32
HMGB4-202ENST00000458277 CCDC91Q7Z6B0 441 aa6.81□□□□□ -1.32
HMGB4-202ENST00000458277 FAM210AQ96ND0 272 aa6.81□□□□□ -1.32
HMGB4-202ENST00000458277 KRTAP4-2Q9BYR5 136 aa6.81□□□□□ -1.32
HMGB4-202ENST00000458277 PANK2Q9BZ23 570 aa6.81□□□□□ -1.32
HMGB4-202ENST00000458277 SLKQ9H2G2 1235 aaPredicted RBP6.81□□□□□ -1.32
HMGB4-202ENST00000458277 MED4Q9NPJ6 270 aa6.81□□□□□ -1.32
HMGB4-202ENST00000458277 PRDM6Q9NQX0 595 aa6.81□□□□□ -1.32
HMGB4-202ENST00000458277 DONSONQ9NYP3 566 aa6.81□□□□□ -1.32
HMGB4-202ENST00000458277 ZKSCAN5Q9Y2L8 839 aa6.81□□□□□ -1.32
HMGB4-202ENST00000458277 NCOA2Q15596 1464 aa6.8□□□□□ -1.32
HMGB4-202ENST00000458277 TARBP1Q13395 1621 aaKnown RBP6.8□□□□□ -1.32
HMGB4-202ENST00000458277 ZNF853P0CG23 659 aa6.8□□□□□ -1.32
HMGB4-202ENST00000458277 HSPA5P11021 654 aaKnown RBP6.8□□□□□ -1.32
HMGB4-202ENST00000458277 NRG1Q02297 640 aaPredicted RBP6.8□□□□□ -1.32
HMGB4-202ENST00000458277 KIAA2012Q0VF49 1180 aa6.8□□□□□ -1.32
HMGB4-202ENST00000458277 SH3D19Q5HYK7 790 aa6.8□□□□□ -1.32
HMGB4-202ENST00000458277 OTUD6BQ8N6M0 293 aa6.8□□□□□ -1.32
HMGB4-202ENST00000458277 TMC1Q8TDI8 760 aa6.8□□□□□ -1.32
HMGB4-202ENST00000458277 RASSF4Q9H2L5 321 aa6.8□□□□□ -1.32
HMGB4-202ENST00000458277 SLC52A1Q9NWF4 448 aa6.8□□□□□ -1.32
HMGB4-202ENST00000458277 CWC15Q9P013 229 aaKnown RBP6.8□□□□□ -1.32
HMGB4-202ENST00000458277 RNF114Q9Y508 228 aa6.8□□□□□ -1.32
HMGB4-202ENST00000458277 KIF16BQ96L93 1317 aa6.79□□□□□ -1.32
HMGB4-202ENST00000458277 MAPK8IP3Q9UPT6 1336 aa6.79□□□□□ -1.32
HMGB4-202ENST00000458277 KIAA1107Q9UPP5 1409 aa6.79□□□□□ -1.32
HMGB4-202ENST00000458277 TAL1P17542 331 aaPredicted RBP6.79□□□□□ -1.32
HMGB4-202ENST00000458277 SETDB1Q15047 1291 aa6.79□□□□□ -1.32
HMGB4-202ENST00000458277 ICE2Q659A1 982 aa6.79□□□□□ -1.32
HMGB4-202ENST00000458277 AEBP1Q8IUX7 1158 aa6.79□□□□□ -1.32
HMGB4-202ENST00000458277 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.79□□□□□ -1.32
HMGB4-202ENST00000458277 LENG1Q96BZ8 264 aaPredicted RBP6.79□□□□□ -1.32
HMGB4-202ENST00000458277 CCDC85AQ96PX6 553 aaPredicted RBP6.79□□□□□ -1.32
HMGB4-202ENST00000458277 NIFKQ9BYG3 293 aaKnown RBP6.79□□□□□ -1.32
HMGB4-202ENST00000458277 DEF6Q9H4E7 631 aa6.79□□□□□ -1.32
HMGB4-202ENST00000458277 ANTXR1Q9H6X2 564 aa6.79□□□□□ -1.32
HMGB4-202ENST00000458277 PRKRIP1Q9H875 184 aaPredicted RBP6.79□□□□□ -1.32
HMGB4-202ENST00000458277 USP21Q9UK80 565 aa6.79□□□□□ -1.32
HMGB4-202ENST00000458277 ABCA10Q8WWZ4 1543 aa6.79□□□□□ -1.32
HMGB4-202ENST00000458277 IFT140Q96RY7 1462 aa6.79□□□□□ -1.32
HMGB4-202ENST00000458277 SOGA1O94964 1423 aa6.78□□□□□ -1.32
HMGB4-202ENST00000458277 AKNAQ7Z591 1439 aa6.78□□□□□ -1.32
HMGB4-202ENST00000458277 ERICH3Q5RHP9 1530 aa6.78□□□□□ -1.32
HMGB4-202ENST00000458277 ADARB2-AS1A8MUL3 147 aa6.78□□□□□ -1.32
HMGB4-202ENST00000458277 SIN3BO75182 1162 aa6.78□□□□□ -1.32
HMGB4-202ENST00000458277 TPM3P06753 285 aa6.78□□□□□ -1.32
HMGB4-202ENST00000458277 SSTR4P31391 388 aa6.78□□□□□ -1.32
HMGB4-202ENST00000458277 TDO2P48775 406 aa6.78□□□□□ -1.32
HMGB4-202ENST00000458277 FAM43BQ6ZT52 329 aaPredicted RBP6.78□□□□□ -1.32
HMGB4-202ENST00000458277 FAM9BQ8IZU0 186 aa6.78□□□□□ -1.32
HMGB4-202ENST00000458277 ZIC5Q96T25 663 aa6.78□□□□□ -1.32
HMGB4-202ENST00000458277 RCAN3Q9UKA8 241 aa6.78□□□□□ -1.32
HMGB4-202ENST00000458277 MRVI1Q9Y6F6 885 aa6.78□□□□□ -1.32
HMGB4-202ENST00000458277 INSRP06213 1382 aa6.78□□□□□ -1.32
HMGB4-202ENST00000458277 TONSLQ96HA7 1378 aa6.78□□□□□ -1.32
HMGB4-202ENST00000458277 SETD5Q9C0A6 1442 aa6.77□□□□□ -1.33
HMGB4-202ENST00000458277 MAPKBP1O60336 1514 aa6.77□□□□□ -1.33
HMGB4-202ENST00000458277 A0A0A0MRY4 1105 aa6.77□□□□□ -1.33
HMGB4-202ENST00000458277 PPP1R12AO14974 1030 aaPredicted RBP6.77□□□□□ -1.33
HMGB4-202ENST00000458277 TATP17735 454 aaPredicted RBP6.77□□□□□ -1.33
HMGB4-202ENST00000458277 GUCY2CP25092 1073 aa6.77□□□□□ -1.33
HMGB4-202ENST00000458277 NR1H3Q13133 447 aa6.77□□□□□ -1.33
HMGB4-202ENST00000458277 RABEP1Q15276 862 aa6.77□□□□□ -1.33
HMGB4-202ENST00000458277 SSBP4Q9BWG4 385 aaPredicted RBP6.77□□□□□ -1.33
HMGB4-202ENST00000458277 ZNF330Q9Y3S2 320 aaPredicted RBP6.77□□□□□ -1.33
HMGB4-202ENST00000458277 RAD54L2Q9Y4B4 1467 aa6.77□□□□□ -1.33
HMGB4-202ENST00000458277 EFSO43281 561 aa6.76□□□□□ -1.33
HMGB4-202ENST00000458277 RFC5P40937 340 aa6.76□□□□□ -1.33
HMGB4-202ENST00000458277 LAMC2Q13753 1193 aa6.76□□□□□ -1.33
HMGB4-202ENST00000458277 TEX35Q5T0J7 233 aa6.76□□□□□ -1.33
HMGB4-202ENST00000458277 BICDL1Q6ZP65 573 aa6.76□□□□□ -1.33
HMGB4-202ENST00000458277 PDLIM2Q96JY6 352 aa6.76□□□□□ -1.33
HMGB4-202ENST00000458277 SIN3AQ96ST3 1273 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms