RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 DNAJC2Q99543 621 aaKnown RBP12.97□□□□□ -0.33
RFX3-211ENST00000458034 SCAND2PQ9GZW5 306 aaPredicted RBP12.97□□□□□ -0.33
RFX3-211ENST00000458034 PLSCR2Q9NRY7 297 aa12.97□□□□□ -0.33
RFX3-211ENST00000458034 ATG3Q9NT62 314 aa12.97□□□□□ -0.33
RFX3-211ENST00000458034 KIF3AQ9Y496 699 aa12.97□□□□□ -0.33
RFX3-211ENST00000458034 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.97□□□□□ -0.33
RFX3-211ENST00000458034 KCPQ6ZWJ8 1503 aa12.97□□□□□ -0.33
RFX3-211ENST00000458034 ZNF609O15014 1411 aa12.96□□□□□ -0.33
RFX3-211ENST00000458034 SHANK3Q9BYB0 1731 aa12.96□□□□□ -0.33
RFX3-211ENST00000458034 ATP5J2-PTCD1G3V325 749 aa12.96□□□□□ -0.33
RFX3-211ENST00000458034 PTCD1O75127 700 aaKnown RBP12.96□□□□□ -0.33
RFX3-211ENST00000458034 CIAO1O76071 339 aa12.96□□□□□ -0.33
RFX3-211ENST00000458034 TPM3P06753 285 aa12.96□□□□□ -0.33
RFX3-211ENST00000458034 TOB2Q14106 344 aaPredicted RBP12.96□□□□□ -0.33
RFX3-211ENST00000458034 LMBR1LQ6UX01 489 aa12.96□□□□□ -0.33
RFX3-211ENST00000458034 ZNF589Q86UQ0 364 aaPredicted RBP12.96□□□□□ -0.33
RFX3-211ENST00000458034 CABLES1Q8TDN4 633 aa12.96□□□□□ -0.33
RFX3-211ENST00000458034 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.96□□□□□ -0.33
RFX3-211ENST00000458034 DBNDD2Q9BQY9 259 aa12.96□□□□□ -0.33
RFX3-211ENST00000458034 LLPHQ9BRT6 129 aaKnown RBP12.96□□□□□ -0.33
RFX3-211ENST00000458034 CHMP3Q9Y3E7 222 aa12.96□□□□□ -0.33
RFX3-211ENST00000458034 GOLGA6L4A6NEF3 574 aa12.95□□□□□ -0.34
RFX3-211ENST00000458034 CCDC192P0DO97 292 aa12.95□□□□□ -0.34
RFX3-211ENST00000458034 HSP90B1P14625 803 aaKnown RBP12.95□□□□□ -0.34
RFX3-211ENST00000458034 CLCN6P51797 869 aa12.95□□□□□ -0.34
RFX3-211ENST00000458034 FOXO4P98177 505 aa12.95□□□□□ -0.34
RFX3-211ENST00000458034 NKX1-1Q15270 411 aaPredicted RBP12.95□□□□□ -0.34
RFX3-211ENST00000458034 TOM1L2Q6ZVM7 507 aa12.95□□□□□ -0.34
RFX3-211ENST00000458034 DDX17Q92841 729 aaKnown RBP12.95□□□□□ -0.34
RFX3-211ENST00000458034 GTF3C6Q969F1 213 aa12.95□□□□□ -0.34
RFX3-211ENST00000458034 DSCC1Q9BVC3 393 aa12.95□□□□□ -0.34
RFX3-211ENST00000458034 PRDM11Q9NQV5 511 aa12.95□□□□□ -0.34
RFX3-211ENST00000458034 FBXO3Q9UK99 471 aa12.95□□□□□ -0.34
RFX3-211ENST00000458034 TNS2Q63HR2 1409 aa12.95□□□□□ -0.34
RFX3-211ENST00000458034 MYH7P12883 1935 aa12.94□□□□□ -0.34
RFX3-211ENST00000458034 COL5A2P05997 1499 aaPredicted RBP12.94□□□□□ -0.34
RFX3-211ENST00000458034 FGD1P98174 961 aa12.94□□□□□ -0.34
RFX3-211ENST00000458034 KIAA2012Q0VF49 1180 aa12.94□□□□□ -0.34
RFX3-211ENST00000458034 ZSCAN16Q9H4T2 348 aaPredicted RBP12.94□□□□□ -0.34
RFX3-211ENST00000458034 DDX19AQ9NUU7 478 aaKnown RBP12.94□□□□□ -0.34
RFX3-211ENST00000458034 PAG1Q9NWQ8 432 aa12.94□□□□□ -0.34
RFX3-211ENST00000458034 H3BQV1 296 aa12.93□□□□□ -0.34
RFX3-211ENST00000458034 EYA2O00167 538 aa12.93□□□□□ -0.34
RFX3-211ENST00000458034 IL2RBP14784 551 aa12.93□□□□□ -0.34
RFX3-211ENST00000458034 PIP4K2AP48426 406 aaPredicted RBP12.93□□□□□ -0.34
RFX3-211ENST00000458034 HMGN5P82970 282 aaKnown RBP12.93□□□□□ -0.34
RFX3-211ENST00000458034 MAP3K11Q16584 847 aa12.93□□□□□ -0.34
RFX3-211ENST00000458034 IFFO2Q5TF58 517 aa12.93□□□□□ -0.34
RFX3-211ENST00000458034 CDC37L1Q7L3B6 337 aa12.93□□□□□ -0.34
RFX3-211ENST00000458034 DDX54Q8TDD1 881 aaKnown RBP12.93□□□□□ -0.34
RFX3-211ENST00000458034 JARID2Q92833 1246 aaPredicted RBP12.93□□□□□ -0.34
RFX3-211ENST00000458034 NEUROD6Q96NK8 337 aa12.93□□□□□ -0.34
RFX3-211ENST00000458034 CARD10Q9BWT7 1032 aa12.93□□□□□ -0.34
RFX3-211ENST00000458034 NUP62CLQ9H1M0 184 aa12.93□□□□□ -0.34
RFX3-211ENST00000458034 ABCC12Q96J65 1359 aa12.93□□□□□ -0.34
RFX3-211ENST00000458034 GOLGA6L6A8MZA4 724 aa12.92□□□□□ -0.34
RFX3-211ENST00000458034 NBPF26B4DH59 902 aa12.92□□□□□ -0.34
RFX3-211ENST00000458034 KDM4AO75164 1064 aa12.92□□□□□ -0.34
RFX3-211ENST00000458034 IFIT1P09914 478 aaKnown RBP12.92□□□□□ -0.34
RFX3-211ENST00000458034 HCLS1P14317 486 aaPredicted RBP12.92□□□□□ -0.34
RFX3-211ENST00000458034 ZMYM1Q5SVZ6 1142 aa12.92□□□□□ -0.34
RFX3-211ENST00000458034 NBPF14Q5TI25 921 aa12.92□□□□□ -0.34
RFX3-211ENST00000458034 NBPF10Q6P3W6 841 aaKnown RBP12.92□□□□□ -0.34
RFX3-211ENST00000458034 Q6ZUG5 572 aa12.92□□□□□ -0.34
RFX3-211ENST00000458034 DDX46Q7L014 1031 aaKnown RBP12.92□□□□□ -0.34
RFX3-211ENST00000458034 NBPF15Q8N660 670 aa12.92□□□□□ -0.34
RFX3-211ENST00000458034 EDC3Q96F86 508 aaKnown RBP12.92□□□□□ -0.34
RFX3-211ENST00000458034 SPATA32Q96LK8 384 aa12.92□□□□□ -0.34
RFX3-211ENST00000458034 FUCA2Q9BTY2 467 aa12.92□□□□□ -0.34
RFX3-211ENST00000458034 TEX13AQ9BXU3 409 aaPredicted RBP12.92□□□□□ -0.34
RFX3-211ENST00000458034 AKAP2Q9Y2D5 859 aa12.92□□□□□ -0.34
RFX3-211ENST00000458034 PFKFB2O60825 505 aa12.91□□□□□ -0.34
RFX3-211ENST00000458034 ADCY5O95622 1261 aa12.91□□□□□ -0.34
RFX3-211ENST00000458034 STK3Q13188 491 aa12.91□□□□□ -0.34
RFX3-211ENST00000458034 ATL3Q6DD88 541 aa12.91□□□□□ -0.34
RFX3-211ENST00000458034 KIF6Q6ZMV9 814 aa12.91□□□□□ -0.34
RFX3-211ENST00000458034 TTLL7Q6ZT98 887 aa12.91□□□□□ -0.34
RFX3-211ENST00000458034 DHX32Q7L7V1 743 aaKnown RBP12.91□□□□□ -0.34
RFX3-211ENST00000458034 ATG9AQ7Z3C6 839 aa12.91□□□□□ -0.34
RFX3-211ENST00000458034 TTC6Q86TZ1 520 aa12.91□□□□□ -0.34
RFX3-211ENST00000458034 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.91□□□□□ -0.34
RFX3-211ENST00000458034 CEP126Q9P2H0 1117 aa12.91□□□□□ -0.34
RFX3-211ENST00000458034 USP25Q9UHP3 1055 aa12.91□□□□□ -0.34
RFX3-211ENST00000458034 CFAP45Q9UL16 551 aa12.91□□□□□ -0.34
RFX3-211ENST00000458034 ANKRD36CQ5JPF3 1778 aa12.91□□□□□ -0.34
RFX3-211ENST00000458034 MYH3P11055 1940 aa12.9□□□□□ -0.34
RFX3-211ENST00000458034 GOLIM4O00461 696 aa12.9□□□□□ -0.34
RFX3-211ENST00000458034 RNF113AO15541 343 aaKnown RBP12.9□□□□□ -0.34
RFX3-211ENST00000458034 RRP9O43818 475 aaKnown RBP12.9□□□□□ -0.34
RFX3-211ENST00000458034 ZFYP08048 801 aaPredicted RBP12.9□□□□□ -0.34
RFX3-211ENST00000458034 CYP21A2P08686 494 aa12.9□□□□□ -0.34
RFX3-211ENST00000458034 RESTQ13127 1097 aa12.9□□□□□ -0.34
RFX3-211ENST00000458034 CCDC57Q2TAC2 916 aa12.9□□□□□ -0.34
RFX3-211ENST00000458034 CCDC158Q5M9N0 1113 aa12.9□□□□□ -0.34
RFX3-211ENST00000458034 GIMAP6Q6P9H5 292 aa12.9□□□□□ -0.34
RFX3-211ENST00000458034 CCDC129Q6ZRS4 1044 aa12.9□□□□□ -0.34
RFX3-211ENST00000458034 BRINP3Q76B58 766 aa12.9□□□□□ -0.34
RFX3-211ENST00000458034 TCEANC2Q96MN5 208 aa12.9□□□□□ -0.34
RFX3-211ENST00000458034 DCBLD2Q96PD2 775 aa12.9□□□□□ -0.34
RFX3-211ENST00000458034 ISCA1Q9BUE6 129 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms