RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 PTPRCP08575 1304 aa11.92□□□□□ -0.5
PTCHD1-202ENST00000456522 F6X3S4 739 aa11.92□□□□□ -0.5
PTCHD1-202ENST00000456522 ST18O60284 1047 aa11.92□□□□□ -0.5
PTCHD1-202ENST00000456522 RPS6KA4O75676 772 aa11.92□□□□□ -0.5
PTCHD1-202ENST00000456522 DDX58O95786 925 aaKnown RBP11.92□□□□□ -0.5
PTCHD1-202ENST00000456522 TRIM27P14373 513 aa11.92□□□□□ -0.5
PTCHD1-202ENST00000456522 HMGB2P26583 209 aaKnown RBP11.92□□□□□ -0.5
PTCHD1-202ENST00000456522 EIF5P55010 431 aaKnown RBP11.92□□□□□ -0.5
PTCHD1-202ENST00000456522 IRX6P78412 446 aaPredicted RBP11.92□□□□□ -0.5
PTCHD1-202ENST00000456522 ATF7IPQ6VMQ6 1270 aa11.92□□□□□ -0.5
PTCHD1-202ENST00000456522 KIF6Q6ZMV9 814 aa11.92□□□□□ -0.5
PTCHD1-202ENST00000456522 NUTM1Q86Y26 1132 aa11.92□□□□□ -0.5
PTCHD1-202ENST00000456522 API5Q9BZZ5 524 aaKnown RBP11.92□□□□□ -0.5
PTCHD1-202ENST00000456522 TBC1D2BQ9UPU7 963 aa11.92□□□□□ -0.5
PTCHD1-202ENST00000456522 RTCBQ9Y3I0 505 aaKnown RBP11.92□□□□□ -0.5
PTCHD1-202ENST00000456522 UBR3Q6ZT12 1888 aa11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 RNF123Q5XPI4 1314 aa11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 PI4KAP2A4QPH2 592 aa11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 USP46P62068 366 aa11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 ZNF827Q17R98 1081 aa11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 C20orf194Q5TEA3 1177 aa11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 SLC4A10Q6U841 1118 aa11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 ANKRD13DQ6ZTN6 518 aa11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 DZIP3Q86Y13 1208 aaKnown RBP11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 FTSJ3Q8IY81 847 aaKnown RBP11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 PI4KAP1Q8N8J0 262 aa11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 PANK1Q8TE04 598 aa11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 ARHGAP45Q92619 1136 aa11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 ZBTB3Q9H5J0 574 aa11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 MAP3K2Q9Y2U5 619 aa11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 NUP188Q5SRE5 1749 aa11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 COL15A1P39059 1388 aa11.91□□□□□ -0.5
PTCHD1-202ENST00000456522 A0A087WZG4 1122 aa11.9□□□□□ -0.5
PTCHD1-202ENST00000456522 MOXD2PA6NHM9 499 aa11.9□□□□□ -0.5
PTCHD1-202ENST00000456522 GCGRP47871 477 aa11.9□□□□□ -0.5
PTCHD1-202ENST00000456522 TMEM259Q4ZIN3 620 aa11.9□□□□□ -0.5
PTCHD1-202ENST00000456522 DMRTA1Q5VZB9 504 aa11.9□□□□□ -0.5
PTCHD1-202ENST00000456522 KSR2Q6VAB6 950 aa11.9□□□□□ -0.5
PTCHD1-202ENST00000456522 AMIGO3Q86WK7 504 aa11.9□□□□□ -0.5
PTCHD1-202ENST00000456522 DZIP1LQ8IYY4 767 aaKnown RBP11.9□□□□□ -0.5
PTCHD1-202ENST00000456522 ZNF687Q8N1G0 1237 aa11.9□□□□□ -0.5
PTCHD1-202ENST00000456522 TFCP2L1Q9NZI6 479 aa11.9□□□□□ -0.5
PTCHD1-202ENST00000456522 ADCY9O60503 1353 aa11.9□□□□□ -0.5
PTCHD1-202ENST00000456522 ARFGEF2Q9Y6D5 1785 aa11.9□□□□□ -0.51
PTCHD1-202ENST00000456522 TUBGCP6Q96RT7 1819 aa11.89□□□□□ -0.51
PTCHD1-202ENST00000456522 RLBP1P12271 317 aa11.89□□□□□ -0.51
PTCHD1-202ENST00000456522 TRAPPC3LQ5T215 181 aa11.89□□□□□ -0.51
PTCHD1-202ENST00000456522 HOMEZQ8IX15 550 aa11.89□□□□□ -0.51
PTCHD1-202ENST00000456522 PLBD2Q8NHP8 589 aa11.89□□□□□ -0.51
PTCHD1-202ENST00000456522 DNAAF4Q8WXU2 420 aa11.89□□□□□ -0.51
PTCHD1-202ENST00000456522 STK32BQ9NY57 414 aa11.89□□□□□ -0.51
PTCHD1-202ENST00000456522 VPS9D1Q9Y2B5 631 aa11.89□□□□□ -0.51
PTCHD1-202ENST00000456522 MAP3K15Q6ZN16 1313 aa11.88□□□□□ -0.51
PTCHD1-202ENST00000456522 LILRB3O75022 631 aa11.88□□□□□ -0.51
PTCHD1-202ENST00000456522 KDM4AO75164 1064 aa11.88□□□□□ -0.51
PTCHD1-202ENST00000456522 NEFLP07196 543 aa11.88□□□□□ -0.51
PTCHD1-202ENST00000456522 RFC4P35249 363 aa11.88□□□□□ -0.51
PTCHD1-202ENST00000456522 PDE3AQ14432 1141 aa11.88□□□□□ -0.51
PTCHD1-202ENST00000456522 PRPF38BQ5VTL8 546 aaKnown RBP11.88□□□□□ -0.51
PTCHD1-202ENST00000456522 LAPTM4BQ86VI4 370 aa11.88□□□□□ -0.51
PTCHD1-202ENST00000456522 TMEM57Q8N5G2 664 aa11.88□□□□□ -0.51
PTCHD1-202ENST00000456522 SRP68Q9UHB9 627 aaKnown RBP11.88□□□□□ -0.51
PTCHD1-202ENST00000456522 NUP98P52948 1817 aa11.88□□□□□ -0.51
PTCHD1-202ENST00000456522 ABCC4O15439 1325 aa11.87□□□□□ -0.51
PTCHD1-202ENST00000456522 C4AP0C0L4 1744 aa11.87□□□□□ -0.51
PTCHD1-202ENST00000456522 BHMG1C9JSJ3 638 aaPredicted RBP11.87□□□□□ -0.51
PTCHD1-202ENST00000456522 ZPR1O75312 459 aa11.87□□□□□ -0.51
PTCHD1-202ENST00000456522 CAMTA2O94983 1202 aa11.87□□□□□ -0.51
PTCHD1-202ENST00000456522 SLC10A3P09131 477 aa11.87□□□□□ -0.51
PTCHD1-202ENST00000456522 SSFA2P28290 1259 aa11.87□□□□□ -0.51
PTCHD1-202ENST00000456522 SLC15A2Q16348 729 aa11.87□□□□□ -0.51
PTCHD1-202ENST00000456522 HLFQ16534 295 aa11.87□□□□□ -0.51
PTCHD1-202ENST00000456522 SWT1Q5T5J6 900 aaKnown RBP11.87□□□□□ -0.51
PTCHD1-202ENST00000456522 ITPRIPQ8IWB1 547 aa11.87□□□□□ -0.51
PTCHD1-202ENST00000456522 MYD88Q99836 296 aa11.87□□□□□ -0.51
PTCHD1-202ENST00000456522 METTL22Q9BUU2 404 aaPredicted RBP11.87□□□□□ -0.51
PTCHD1-202ENST00000456522 C1orf115Q9H7X2 142 aa11.87□□□□□ -0.51
PTCHD1-202ENST00000456522 COG6Q9Y2V7 657 aa11.87□□□□□ -0.51
PTCHD1-202ENST00000456522 AFDNP55196 1824 aaKnown RBP11.86□□□□□ -0.51
PTCHD1-202ENST00000456522 ERVV-1B6SEH8 477 aa11.86□□□□□ -0.51
PTCHD1-202ENST00000456522 ATP5J2-PTCD1G3V325 749 aa11.86□□□□□ -0.51
PTCHD1-202ENST00000456522 HOXA2O43364 376 aa11.86□□□□□ -0.51
PTCHD1-202ENST00000456522 CCT4P50991 539 aaKnown RBP11.86□□□□□ -0.51
PTCHD1-202ENST00000456522 EMP3P54852 163 aa11.86□□□□□ -0.51
PTCHD1-202ENST00000456522 NEXNQ0ZGT2 675 aa11.86□□□□□ -0.51
PTCHD1-202ENST00000456522 USPL1Q5W0Q7 1092 aa11.86□□□□□ -0.51
PTCHD1-202ENST00000456522 RDH13Q8NBN7 331 aa11.86□□□□□ -0.51
PTCHD1-202ENST00000456522 CRBNQ96SW2 442 aa11.86□□□□□ -0.51
PTCHD1-202ENST00000456522 NARFQ9UHQ1 456 aa11.86□□□□□ -0.51
PTCHD1-202ENST00000456522 BCORQ6W2J9 1755 aa11.85□□□□□ -0.51
PTCHD1-202ENST00000456522 TK2O00142 265 aa11.85□□□□□ -0.51
PTCHD1-202ENST00000456522 TRAK2O60296 914 aa11.85□□□□□ -0.51
PTCHD1-202ENST00000456522 GPTP24298 496 aa11.85□□□□□ -0.51
PTCHD1-202ENST00000456522 BEND3Q5T5X7 828 aa11.85□□□□□ -0.51
PTCHD1-202ENST00000456522 COL23A1Q86Y22 540 aaPredicted RBP11.85□□□□□ -0.51
PTCHD1-202ENST00000456522 FLAD1Q8NFF5 587 aa11.85□□□□□ -0.51
PTCHD1-202ENST00000456522 SRCIN1Q9C0H9 1055 aa11.85□□□□□ -0.51
PTCHD1-202ENST00000456522 PNPLA7Q6ZV29 1317 aa11.85□□□□□ -0.51
PTCHD1-202ENST00000456522 TCIRG1Q13488 830 aa11.84□□□□□ -0.51
PTCHD1-202ENST00000456522 MVPQ14764 893 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms