RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 PODXL2Q9NZ53 605 aa27.94■■■□□ 2.06
SEC22C-213ENST00000456222 CNOT7Q9UIV1 285 aaKnown RBP27.94■■■□□ 2.06
SEC22C-213ENST00000456222 NEURL1BA8MQ27 555 aa27.93■■■□□ 2.06
SEC22C-213ENST00000456222 HSP90B1P14625 803 aaKnown RBP27.93■■■□□ 2.06
SEC22C-213ENST00000456222 SPINK5Q9NQ38 1064 aaPredicted RBP27.93■■■□□ 2.06
SEC22C-213ENST00000456222 ABT1Q9ULW3 272 aaKnown RBP27.93■■■□□ 2.06
SEC22C-213ENST00000456222 CACNA1FO60840 1977 aa27.92■■■□□ 2.06
SEC22C-213ENST00000456222 UFL1O94874 794 aa27.92■■■□□ 2.06
SEC22C-213ENST00000456222 CTSWP56202 376 aa27.92■■■□□ 2.06
SEC22C-213ENST00000456222 DEFB115Q30KQ5 88 aa27.92■■■□□ 2.06
SEC22C-213ENST00000456222 MICALL2Q8IY33 904 aa27.92■■■□□ 2.06
SEC22C-213ENST00000456222 GLIS2Q9BZE0 524 aaPredicted RBP27.92■■■□□ 2.06
SEC22C-213ENST00000456222 PGAP2Q9UHJ9 254 aa27.92■■■□□ 2.06
SEC22C-213ENST00000456222 WTIPA6NIX2 430 aaPredicted RBP27.91■■■□□ 2.06
SEC22C-213ENST00000456222 FOXN1O15353 648 aa27.91■■■□□ 2.06
SEC22C-213ENST00000456222 EGFRP00533 1210 aa27.91■■■□□ 2.06
SEC22C-213ENST00000456222 EYA3Q99504 573 aa27.91■■■□□ 2.06
SEC22C-213ENST00000456222 POLR2AP24928 1970 aaKnown RBP27.9■■■□□ 2.06
SEC22C-213ENST00000456222 FLIIQ13045 1269 aa27.9■■■□□ 2.06
SEC22C-213ENST00000456222 TTLL11Q8NHH1 800 aa27.9■■■□□ 2.06
SEC22C-213ENST00000456222 GREM2Q9H772 168 aa27.9■■■□□ 2.06
SEC22C-213ENST00000456222 ANKIB1Q9P2G1 1089 aa27.9■■■□□ 2.06
SEC22C-213ENST00000456222 VAMP4O75379 141 aa27.89■■■□□ 2.06
SEC22C-213ENST00000456222 EXOSC9Q06265 439 aaKnown RBP27.89■■■□□ 2.06
SEC22C-213ENST00000456222 NEXNQ0ZGT2 675 aa27.89■■■□□ 2.06
SEC22C-213ENST00000456222 SAMD7Q7Z3H4 446 aa27.89■■■□□ 2.06
SEC22C-213ENST00000456222 WDR63Q8IWG1 891 aa27.89■■■□□ 2.06
SEC22C-213ENST00000456222 GGA1Q9UJY5 639 aa27.89■■■□□ 2.06
SEC22C-213ENST00000456222 DLK2Q6UY11 383 aa27.88■■■□□ 2.05
SEC22C-213ENST00000456222 UBE3BQ7Z3V4 1068 aa27.88■■■□□ 2.05
SEC22C-213ENST00000456222 ANKRD18AQ8IVF6 992 aa27.88■■■□□ 2.05
SEC22C-213ENST00000456222 DPF2Q92785 391 aa27.88■■■□□ 2.05
SEC22C-213ENST00000456222 ZC3H12CQ9C0D7 883 aaKnown RBP27.88■■■□□ 2.05
SEC22C-213ENST00000456222 WDR33Q9C0J8 1336 aaKnown RBP27.88■■■□□ 2.05
SEC22C-213ENST00000456222 H7C1D1 291 aa27.87■■■□□ 2.05
SEC22C-213ENST00000456222 H7C1W4 665 aa27.87■■■□□ 2.05
SEC22C-213ENST00000456222 TNS4Q8IZW8 715 aa27.87■■■□□ 2.05
SEC22C-213ENST00000456222 PSME4Q14997 1843 aa27.87■■■□□ 2.05
SEC22C-213ENST00000456222 TBC1D10BQ4KMP7 808 aaPredicted RBP27.86■■■□□ 2.05
SEC22C-213ENST00000456222 FAM9BQ8IZU0 186 aa27.86■■■□□ 2.05
SEC22C-213ENST00000456222 ZC3H15Q8WU90 426 aaKnown RBP27.86■■■□□ 2.05
SEC22C-213ENST00000456222 WBP1LQ9NX94 342 aa27.86■■■□□ 2.05
SEC22C-213ENST00000456222 THSD7BQ9C0I4 1608 aa27.85■■■□□ 2.05
SEC22C-213ENST00000456222 CASP7P55210 303 aa27.85■■■□□ 2.05
SEC22C-213ENST00000456222 FKBP5Q13451 457 aaPredicted RBP27.85■■■□□ 2.05
SEC22C-213ENST00000456222 GCKRQ14397 625 aa27.85■■■□□ 2.05
SEC22C-213ENST00000456222 CELF2O95319 508 aaKnown RBP27.84■■■□□ 2.05
SEC22C-213ENST00000456222 CYP4F22Q6NT55 531 aa27.84■■■□□ 2.05
SEC22C-213ENST00000456222 DNAAF4Q8WXU2 420 aa27.84■■■□□ 2.05
SEC22C-213ENST00000456222 TLL2Q9Y6L7 1015 aa27.84■■■□□ 2.05
SEC22C-213ENST00000456222 XDHP47989 1333 aa27.84■■■□□ 2.05
SEC22C-213ENST00000456222 VIL1P09327 827 aaKnown RBP27.83■■■□□ 2.05
SEC22C-213ENST00000456222 CAPNS2Q96L46 248 aa27.83■■■□□ 2.05
SEC22C-213ENST00000456222 CDC5LQ99459 802 aaKnown RBP27.83■■■□□ 2.05
SEC22C-213ENST00000456222 RPS12P25398 132 aaKnown RBP27.82■■■□□ 2.04
SEC22C-213ENST00000456222 RBM26Q5T8P6 1007 aaKnown RBP27.82■■■□□ 2.04
SEC22C-213ENST00000456222 MINPP1Q9UNW1 487 aa27.82■■■□□ 2.04
SEC22C-213ENST00000456222 GRM1Q13255 1194 aa27.81■■■□□ 2.04
SEC22C-213ENST00000456222 PAXIP1Q6ZW49 1069 aaPredicted RBP27.81■■■□□ 2.04
SEC22C-213ENST00000456222 USP48Q86UV5 1035 aa27.81■■■□□ 2.04
SEC22C-213ENST00000456222 ZNF408Q9H9D4 720 aa27.81■■■□□ 2.04
SEC22C-213ENST00000456222 BSDC1Q9NW68 430 aaPredicted RBP27.81■■■□□ 2.04
SEC22C-213ENST00000456222 F6X3S4 739 aa27.8■■■□□ 2.04
SEC22C-213ENST00000456222 CDC37L1Q7L3B6 337 aa27.8■■■□□ 2.04
SEC22C-213ENST00000456222 SAPCD2Q86UD0 394 aa27.8■■■□□ 2.04
SEC22C-213ENST00000456222 LINS1Q8NG48 757 aa27.8■■■□□ 2.04
SEC22C-213ENST00000456222 ZNF646O15015 1829 aaPredicted RBP27.8■■■□□ 2.04
SEC22C-213ENST00000456222 ASTN2O75129 1339 aaPredicted RBP27.79■■■□□ 2.04
SEC22C-213ENST00000456222 CAPN15O75808 1086 aa27.79■■■□□ 2.04
SEC22C-213ENST00000456222 ATP2B4P23634 1241 aa27.79■■■□□ 2.04
SEC22C-213ENST00000456222 FAM161AQ3B820 660 aa27.79■■■□□ 2.04
SEC22C-213ENST00000456222 PLA2G12BQ9BX93 195 aa27.79■■■□□ 2.04
SEC22C-213ENST00000456222 G3V3G9 751 aa27.78■■■□□ 2.04
SEC22C-213ENST00000456222 DCAF8Q5TAQ9 597 aa27.78■■■□□ 2.04
SEC22C-213ENST00000456222 AIDAQ96BJ3 306 aa27.78■■■□□ 2.04
SEC22C-213ENST00000456222 CTCFP49711 727 aaPredicted RBP27.77■■■□□ 2.04
SEC22C-213ENST00000456222 ADM5C9JUS6 153 aa27.76■■■□□ 2.03
SEC22C-213ENST00000456222 AOC2O75106 756 aa27.76■■■□□ 2.03
SEC22C-213ENST00000456222 CSF1RP07333 972 aa27.76■■■□□ 2.03
SEC22C-213ENST00000456222 ITGA6P23229 1130 aa27.76■■■□□ 2.03
SEC22C-213ENST00000456222 LBX1P52954 281 aa27.76■■■□□ 2.03
SEC22C-213ENST00000456222 KIF4BQ2VIQ3 1234 aa27.76■■■□□ 2.03
SEC22C-213ENST00000456222 RSBN1LQ6PCB5 846 aaPredicted RBP27.76■■■□□ 2.03
SEC22C-213ENST00000456222 TXNRD3Q86VQ6 643 aa27.76■■■□□ 2.03
SEC22C-213ENST00000456222 GMLQ99445 158 aa27.76■■■□□ 2.03
SEC22C-213ENST00000456222 MYH16Q9H6N6 1097 aa27.76■■■□□ 2.03
SEC22C-213ENST00000456222 ZNF609O15014 1411 aa27.75■■■□□ 2.03
SEC22C-213ENST00000456222 MED23Q9ULK4 1368 aa27.75■■■□□ 2.03
SEC22C-213ENST00000456222 CCT4P50991 539 aaKnown RBP27.75■■■□□ 2.03
SEC22C-213ENST00000456222 KRT26Q7Z3Y9 468 aa27.75■■■□□ 2.03
SEC22C-213ENST00000456222 HSPA8P11142 646 aaKnown RBP27.74■■■□□ 2.03
SEC22C-213ENST00000456222 KLRK1P26718 216 aa27.74■■■□□ 2.03
SEC22C-213ENST00000456222 ECE1P42892 770 aa27.74■■■□□ 2.03
SEC22C-213ENST00000456222 BEND3Q5T5X7 828 aa27.74■■■□□ 2.03
SEC22C-213ENST00000456222 PRDM10Q9NQV6 1147 aa27.74■■■□□ 2.03
SEC22C-213ENST00000456222 ZNF521Q96K83 1311 aa27.73■■■□□ 2.03
SEC22C-213ENST00000456222 ZNF280AP59817 542 aaPredicted RBP27.73■■■□□ 2.03
SEC22C-213ENST00000456222 MAP2K1Q02750 393 aaPredicted RBP27.73■■■□□ 2.03
SEC22C-213ENST00000456222 MXD3Q9BW11 206 aa27.73■■■□□ 2.03
SEC22C-213ENST00000456222 IGHMBP2P38935 993 aaKnown RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms