RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 THSD7BQ9C0I4 1608 aa16.62■□□□□ 0.25
TREX1-203ENST00000456089 RTL9Q8NET4 1388 aa16.62■□□□□ 0.25
TREX1-203ENST00000456089 CACNA1FO60840 1977 aa16.61■□□□□ 0.25
TREX1-203ENST00000456089 PI4KAP2A4QPH2 592 aa16.61■□□□□ 0.25
TREX1-203ENST00000456089 PDE8AO60658 829 aa16.61■□□□□ 0.25
TREX1-203ENST00000456089 DDX58O95786 925 aaKnown RBP16.61■□□□□ 0.25
TREX1-203ENST00000456089 EGFRP00533 1210 aa16.61■□□□□ 0.25
TREX1-203ENST00000456089 IGKV5-2P06315 115 aa16.61■□□□□ 0.25
TREX1-203ENST00000456089 CWF19L2Q2TBE0 894 aaKnown RBP16.61■□□□□ 0.25
TREX1-203ENST00000456089 SAMD7Q7Z3H4 446 aa16.61■□□□□ 0.25
TREX1-203ENST00000456089 PI4KAP1Q8N8J0 262 aa16.61■□□□□ 0.25
TREX1-203ENST00000456089 AIDAQ96BJ3 306 aa16.61■□□□□ 0.25
TREX1-203ENST00000456089 ZNF408Q9H9D4 720 aa16.61■□□□□ 0.25
TREX1-203ENST00000456089 ANKIB1Q9P2G1 1089 aa16.61■□□□□ 0.25
TREX1-203ENST00000456089 WTIPA6NIX2 430 aaPredicted RBP16.6■□□□□ 0.25
TREX1-203ENST00000456089 UFL1O94874 794 aa16.6■□□□□ 0.25
TREX1-203ENST00000456089 CELF2O95319 508 aaKnown RBP16.6■□□□□ 0.25
TREX1-203ENST00000456089 TWISTNBQ3B726 338 aaPredicted RBP16.6■□□□□ 0.25
TREX1-203ENST00000456089 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
TREX1-203ENST00000456089 TBC1D10BQ4KMP7 808 aaPredicted RBP16.6■□□□□ 0.25
TREX1-203ENST00000456089 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
TREX1-203ENST00000456089 KSR2Q6VAB6 950 aa16.6■□□□□ 0.25
TREX1-203ENST00000456089 CAPNS2Q96L46 248 aa16.6■□□□□ 0.25
TREX1-203ENST00000456089 WBP1LQ9NX94 342 aa16.6■□□□□ 0.25
TREX1-203ENST00000456089 H7C1D1 291 aa16.59■□□□□ 0.25
TREX1-203ENST00000456089 AOC2O75106 756 aa16.59■□□□□ 0.25
TREX1-203ENST00000456089 LBX1P52954 281 aa16.59■□□□□ 0.25
TREX1-203ENST00000456089 RBM26Q5T8P6 1007 aaKnown RBP16.59■□□□□ 0.25
TREX1-203ENST00000456089 EYA3Q99504 573 aa16.59■□□□□ 0.25
TREX1-203ENST00000456089 STK31Q9BXU1 1019 aa16.59■□□□□ 0.25
TREX1-203ENST00000456089 CDHR2Q9BYE9 1310 aa16.59■□□□□ 0.25
TREX1-203ENST00000456089 CTCFP49711 727 aaPredicted RBP16.58■□□□□ 0.24
TREX1-203ENST00000456089 USP48Q86UV5 1035 aa16.58■□□□□ 0.24
TREX1-203ENST00000456089 PGAP2Q9UHJ9 254 aa16.58■□□□□ 0.24
TREX1-203ENST00000456089 GGA1Q9UJY5 639 aa16.58■□□□□ 0.24
TREX1-203ENST00000456089 TLL2Q9Y6L7 1015 aa16.58■□□□□ 0.24
TREX1-203ENST00000456089 ZNF646O15015 1829 aaPredicted RBP16.58■□□□□ 0.24
TREX1-203ENST00000456089 IL16Q14005 1332 aa16.57■□□□□ 0.24
TREX1-203ENST00000456089 FANCIQ9NVI1 1328 aa16.57■□□□□ 0.24
TREX1-203ENST00000456089 SLC4A2P04920 1241 aa16.57■□□□□ 0.24
TREX1-203ENST00000456089 CTSWP56202 376 aa16.57■□□□□ 0.24
TREX1-203ENST00000456089 ZC3H12CQ9C0D7 883 aaKnown RBP16.57■□□□□ 0.24
TREX1-203ENST00000456089 PODXL2Q9NZ53 605 aa16.57■□□□□ 0.24
TREX1-203ENST00000456089 NEURL1BA8MQ27 555 aa16.56■□□□□ 0.24
TREX1-203ENST00000456089 G3V3G9 751 aa16.56■□□□□ 0.24
TREX1-203ENST00000456089 DCAF8Q5TAQ9 597 aa16.56■□□□□ 0.24
TREX1-203ENST00000456089 UBE3BQ7Z3V4 1068 aa16.56■□□□□ 0.24
TREX1-203ENST00000456089 ANKRD18AQ8IVF6 992 aa16.56■□□□□ 0.24
TREX1-203ENST00000456089 WDR63Q8IWG1 891 aa16.56■□□□□ 0.24
TREX1-203ENST00000456089 DPF2Q92785 391 aa16.56■□□□□ 0.24
TREX1-203ENST00000456089 GREM2Q9H772 168 aa16.56■□□□□ 0.24
TREX1-203ENST00000456089 ASTN2O75129 1339 aaPredicted RBP16.55■□□□□ 0.24
TREX1-203ENST00000456089 HSPA8P11142 646 aaKnown RBP16.55■□□□□ 0.24
TREX1-203ENST00000456089 HSP90B1P14625 803 aaKnown RBP16.55■□□□□ 0.24
TREX1-203ENST00000456089 NEXNQ0ZGT2 675 aa16.55■□□□□ 0.24
TREX1-203ENST00000456089 SAPCD2Q86UD0 394 aa16.55■□□□□ 0.24
TREX1-203ENST00000456089 TTLL11Q8NHH1 800 aa16.55■□□□□ 0.24
TREX1-203ENST00000456089 ZC3H15Q8WU90 426 aaKnown RBP16.55■□□□□ 0.24
TREX1-203ENST00000456089 TSKSQ9UJT2 592 aa16.55■□□□□ 0.24
TREX1-203ENST00000456089 A0A1B0GUL6 1792 aa16.54■□□□□ 0.24
TREX1-203ENST00000456089 ADM5C9JUS6 153 aa16.54■□□□□ 0.24
TREX1-203ENST00000456089 CDC37L1Q7L3B6 337 aa16.54■□□□□ 0.24
TREX1-203ENST00000456089 PRDM10Q9NQV6 1147 aa16.54■□□□□ 0.24
TREX1-203ENST00000456089 CASP8AP2Q9UKL3 1982 aa16.53■□□□□ 0.24
TREX1-203ENST00000456089 XDHP47989 1333 aa16.53■□□□□ 0.24
TREX1-203ENST00000456089 VIL1P09327 827 aaKnown RBP16.53■□□□□ 0.24
TREX1-203ENST00000456089 ECE1P42892 770 aa16.53■□□□□ 0.24
TREX1-203ENST00000456089 MAP2K1Q02750 393 aaPredicted RBP16.53■□□□□ 0.24
TREX1-203ENST00000456089 EXOSC9Q06265 439 aaKnown RBP16.53■□□□□ 0.24
TREX1-203ENST00000456089 FLIIQ13045 1269 aa16.53■□□□□ 0.24
TREX1-203ENST00000456089 SPINK5Q9NQ38 1064 aaPredicted RBP16.53■□□□□ 0.24
TREX1-203ENST00000456089 RPS12P25398 132 aaKnown RBP16.52■□□□□ 0.24
TREX1-203ENST00000456089 FKBP5Q13451 457 aaPredicted RBP16.52■□□□□ 0.24
TREX1-203ENST00000456089 KIF4BQ2VIQ3 1234 aa16.52■□□□□ 0.24
TREX1-203ENST00000456089 KRT26Q7Z3Y9 468 aa16.52■□□□□ 0.24
TREX1-203ENST00000456089 CDC5LQ99459 802 aaKnown RBP16.52■□□□□ 0.24
TREX1-203ENST00000456089 MYH16Q9H6N6 1097 aa16.52■□□□□ 0.24
TREX1-203ENST00000456089 MINPP1Q9UNW1 487 aa16.52■□□□□ 0.24
TREX1-203ENST00000456089 H7C1W4 665 aa16.51■□□□□ 0.23
TREX1-203ENST00000456089 CCER2I3L3R5 266 aa16.51■□□□□ 0.23
TREX1-203ENST00000456089 GCKRQ14397 625 aa16.51■□□□□ 0.23
TREX1-203ENST00000456089 ZIC5Q96T25 663 aa16.51■□□□□ 0.23
TREX1-203ENST00000456089 MXD3Q9BW11 206 aa16.51■□□□□ 0.23
TREX1-203ENST00000456089 GGA3Q9NZ52 723 aa16.51■□□□□ 0.23
TREX1-203ENST00000456089 SCAF8Q9UPN6 1271 aaKnown RBP16.51■□□□□ 0.23
TREX1-203ENST00000456089 F6X3S4 739 aa16.5■□□□□ 0.23
TREX1-203ENST00000456089 VAMP4O75379 141 aa16.5■□□□□ 0.23
TREX1-203ENST00000456089 ATP2B4P23634 1241 aa16.5■□□□□ 0.23
TREX1-203ENST00000456089 FAM161AQ3B820 660 aa16.5■□□□□ 0.23
TREX1-203ENST00000456089 RSBN1LQ6PCB5 846 aaPredicted RBP16.5■□□□□ 0.23
TREX1-203ENST00000456089 DNAAF4Q8WXU2 420 aa16.5■□□□□ 0.23
TREX1-203ENST00000456089 DCPSQ96C86 337 aaKnown RBP16.5■□□□□ 0.23
TREX1-203ENST00000456089 KLRK1P26718 216 aa16.49■□□□□ 0.23
TREX1-203ENST00000456089 CASP7P55210 303 aa16.49■□□□□ 0.23
TREX1-203ENST00000456089 HUNKP57058 714 aa16.49■□□□□ 0.23
TREX1-203ENST00000456089 TXNRD3Q86VQ6 643 aa16.49■□□□□ 0.23
TREX1-203ENST00000456089 FBXW7Q969H0 707 aa16.49■□□□□ 0.23
TREX1-203ENST00000456089 BSDC1Q9NW68 430 aaPredicted RBP16.49■□□□□ 0.23
TREX1-203ENST00000456089 ITGA6P23229 1130 aa16.48■□□□□ 0.23
TREX1-203ENST00000456089 CCT4P50991 539 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms