RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 BICDL1Q6ZP65 573 aa11.96□□□□□ -0.49
CHCHD4P3-201ENST00000455954 GTPBP4Q9BZE4 634 aaKnown RBP11.96□□□□□ -0.49
CHCHD4P3-201ENST00000455954 WWC3Q9ULE0 1092 aa11.96□□□□□ -0.49
CHCHD4P3-201ENST00000455954 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.96□□□□□ -0.49
CHCHD4P3-201ENST00000455954 RAD50Q92878 1312 aa11.95□□□□□ -0.5
CHCHD4P3-201ENST00000455954 ZSCAN22P10073 491 aaPredicted RBP11.95□□□□□ -0.5
CHCHD4P3-201ENST00000455954 DMTNQ08495 405 aa11.95□□□□□ -0.5
CHCHD4P3-201ENST00000455954 TBC1D9BQ66K14 1250 aa11.95□□□□□ -0.5
CHCHD4P3-201ENST00000455954 USP48Q86UV5 1035 aa11.95□□□□□ -0.5
CHCHD4P3-201ENST00000455954 CHD4Q14839 1912 aa11.94□□□□□ -0.5
CHCHD4P3-201ENST00000455954 CCDC171Q6TFL3 1326 aa11.94□□□□□ -0.5
CHCHD4P3-201ENST00000455954 RGL2O15211 777 aa11.94□□□□□ -0.5
CHCHD4P3-201ENST00000455954 KDM4AO75164 1064 aa11.94□□□□□ -0.5
CHCHD4P3-201ENST00000455954 KCNA3P22001 575 aa11.94□□□□□ -0.5
CHCHD4P3-201ENST00000455954 CLEC4GQ6UXB4 293 aa11.94□□□□□ -0.5
CHCHD4P3-201ENST00000455954 RNF214Q8ND24 703 aa11.94□□□□□ -0.5
CHCHD4P3-201ENST00000455954 SETDB2Q96T68 719 aa11.94□□□□□ -0.5
CHCHD4P3-201ENST00000455954 FUCA2Q9BTY2 467 aa11.94□□□□□ -0.5
CHCHD4P3-201ENST00000455954 ANO2Q9NQ90 1003 aa11.94□□□□□ -0.5
CHCHD4P3-201ENST00000455954 PIM2Q9P1W9 311 aa11.94□□□□□ -0.5
CHCHD4P3-201ENST00000455954 BCS1LQ9Y276 419 aa11.94□□□□□ -0.5
CHCHD4P3-201ENST00000455954 ZNF652Q9Y2D9 606 aa11.94□□□□□ -0.5
CHCHD4P3-201ENST00000455954 KIF3AQ9Y496 699 aa11.94□□□□□ -0.5
CHCHD4P3-201ENST00000455954 KIAA1551Q9HCM1 1747 aa11.94□□□□□ -0.5
CHCHD4P3-201ENST00000455954 SCN7AQ01118 1682 aa11.94□□□□□ -0.5
CHCHD4P3-201ENST00000455954 CARMIL3Q8ND23 1372 aa11.93□□□□□ -0.5
CHCHD4P3-201ENST00000455954 LAMB4A4D0S4 1761 aa11.93□□□□□ -0.5
CHCHD4P3-201ENST00000455954 ADCY5O95622 1261 aa11.93□□□□□ -0.5
CHCHD4P3-201ENST00000455954 SLC4A2P04920 1241 aa11.93□□□□□ -0.5
CHCHD4P3-201ENST00000455954 CHAF1AQ13111 956 aaPredicted RBP11.93□□□□□ -0.5
CHCHD4P3-201ENST00000455954 ZSCAN31Q96LW9 406 aaPredicted RBP11.93□□□□□ -0.5
CHCHD4P3-201ENST00000455954 TTC14Q96N46 770 aa11.93□□□□□ -0.5
CHCHD4P3-201ENST00000455954 STK31Q9BXU1 1019 aa11.93□□□□□ -0.5
CHCHD4P3-201ENST00000455954 PALD1Q9ULE6 856 aa11.93□□□□□ -0.5
CHCHD4P3-201ENST00000455954 NRXN2Q9P2S2 1712 aa11.92□□□□□ -0.5
CHCHD4P3-201ENST00000455954 F13A1P00488 732 aa11.92□□□□□ -0.5
CHCHD4P3-201ENST00000455954 CHRNA5P30532 468 aa11.92□□□□□ -0.5
CHCHD4P3-201ENST00000455954 DNTTIP2Q5QJE6 756 aaKnown RBP11.92□□□□□ -0.5
CHCHD4P3-201ENST00000455954 CCDC30Q5VVM6 783 aa11.92□□□□□ -0.5
CHCHD4P3-201ENST00000455954 ZNF784Q8NCA9 323 aaPredicted RBP11.92□□□□□ -0.5
CHCHD4P3-201ENST00000455954 CHMP4AQ9BY43 222 aa11.92□□□□□ -0.5
CHCHD4P3-201ENST00000455954 TM6SF1Q9BZW5 370 aa11.92□□□□□ -0.5
CHCHD4P3-201ENST00000455954 SH2B1Q9NRF2 756 aaPredicted RBP11.92□□□□□ -0.5
CHCHD4P3-201ENST00000455954 AFDNP55196 1824 aaKnown RBP11.91□□□□□ -0.5
CHCHD4P3-201ENST00000455954 ERVV-1B6SEH8 477 aa11.91□□□□□ -0.5
CHCHD4P3-201ENST00000455954 GADD45BO75293 160 aaPredicted RBP11.91□□□□□ -0.5
CHCHD4P3-201ENST00000455954 KIF20AO95235 890 aa11.91□□□□□ -0.5
CHCHD4P3-201ENST00000455954 MYL6BP14649 208 aa11.91□□□□□ -0.5
CHCHD4P3-201ENST00000455954 EIF2S2P20042 333 aaKnown RBP11.91□□□□□ -0.5
CHCHD4P3-201ENST00000455954 KRT24Q2M2I5 525 aa11.91□□□□□ -0.5
CHCHD4P3-201ENST00000455954 DALRD3Q5D0E6 543 aaKnown RBP11.91□□□□□ -0.5
CHCHD4P3-201ENST00000455954 PRR5LQ6MZQ0 368 aa11.91□□□□□ -0.5
CHCHD4P3-201ENST00000455954 KCNB2Q92953 911 aa11.91□□□□□ -0.5
CHCHD4P3-201ENST00000455954 BRIP1Q9BX63 1249 aa11.91□□□□□ -0.5
CHCHD4P3-201ENST00000455954 LIMCH1Q9UPQ0 1083 aa11.91□□□□□ -0.5
CHCHD4P3-201ENST00000455954 BCORQ6W2J9 1755 aa11.9□□□□□ -0.5
CHCHD4P3-201ENST00000455954 H0YIN7 160 aa11.9□□□□□ -0.5
CHCHD4P3-201ENST00000455954 NPHP1O15259 732 aa11.9□□□□□ -0.5
CHCHD4P3-201ENST00000455954 SGSM2O43147 1006 aa11.9□□□□□ -0.5
CHCHD4P3-201ENST00000455954 STX6O43752 255 aa11.9□□□□□ -0.5
CHCHD4P3-201ENST00000455954 PDE6BP35913 854 aa11.9□□□□□ -0.5
CHCHD4P3-201ENST00000455954 KIF6Q6ZMV9 814 aa11.9□□□□□ -0.5
CHCHD4P3-201ENST00000455954 C2CD5Q86YS7 1000 aa11.9□□□□□ -0.5
CHCHD4P3-201ENST00000455954 CNBD1Q8NA66 436 aa11.9□□□□□ -0.5
CHCHD4P3-201ENST00000455954 KIAA1524Q8TCG1 905 aa11.9□□□□□ -0.5
CHCHD4P3-201ENST00000455954 SSH3Q8TE77 659 aa11.9□□□□□ -0.5
CHCHD4P3-201ENST00000455954 ANKRD7Q92527 254 aa11.9□□□□□ -0.5
CHCHD4P3-201ENST00000455954 NIP7Q9Y221 180 aaKnown RBP eCLIP11.9□□□□□ -0.5
CHCHD4P3-201ENST00000455954 ELP1O95163 1332 aa11.89□□□□□ -0.51
CHCHD4P3-201ENST00000455954 MAP3K15Q6ZN16 1313 aa11.89□□□□□ -0.51
CHCHD4P3-201ENST00000455954 TRIM6-TRIM34B2RNG4 842 aa11.89□□□□□ -0.51
CHCHD4P3-201ENST00000455954 APBB1O00213 710 aa11.89□□□□□ -0.51
CHCHD4P3-201ENST00000455954 CTIFO43310 598 aaKnown RBP11.89□□□□□ -0.51
CHCHD4P3-201ENST00000455954 ST5P78524 1137 aa11.89□□□□□ -0.51
CHCHD4P3-201ENST00000455954 HLFQ16534 295 aa11.89□□□□□ -0.51
CHCHD4P3-201ENST00000455954 HSP90AB4PQ58FF6 505 aa11.89□□□□□ -0.51
CHCHD4P3-201ENST00000455954 TTLL7Q6ZT98 887 aa11.89□□□□□ -0.51
CHCHD4P3-201ENST00000455954 ARHGAP27Q6ZUM4 889 aa11.89□□□□□ -0.51
CHCHD4P3-201ENST00000455954 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.89□□□□□ -0.51
CHCHD4P3-201ENST00000455954 NBPF5PQ86XG9 351 aaPredicted RBP11.89□□□□□ -0.51
CHCHD4P3-201ENST00000455954 ZNF710Q8N1W2 664 aa11.89□□□□□ -0.51
CHCHD4P3-201ENST00000455954 FEZ1Q99689 392 aa11.89□□□□□ -0.51
CHCHD4P3-201ENST00000455954 SMC3Q9UQE7 1217 aa11.89□□□□□ -0.51
CHCHD4P3-201ENST00000455954 EXOC6BQ9Y2D4 811 aa11.89□□□□□ -0.51
CHCHD4P3-201ENST00000455954 TTC41PQ6P2S7 1318 aa11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 MYH15Q9Y2K3 1946 aa11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 CAVIN2O95810 425 aa11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 HOXB7P09629 217 aa11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 CCDC192P0DO97 292 aa11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 FLIIQ13045 1269 aa11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 POLA2Q14181 598 aa11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 PDIA6Q15084 440 aa11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 FOXD4L5Q5VV16 416 aaPredicted RBP11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 TPTE2Q6XPS3 522 aa11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 CNTROBQ8N137 903 aa11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 PDCL2Q8N4E4 241 aa11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 CCDC24Q8N4L8 307 aa11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 RUFY2Q8WXA3 655 aa11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 FOXD4L4Q8WXT5 416 aaPredicted RBP11.88□□□□□ -0.51
CHCHD4P3-201ENST00000455954 RILPL2Q969X0 211 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms