RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 CNNM1Q9NRU3 951 aa11.79□□□□□ -0.52
ATXN3-205ENST00000454964 ANKIB1Q9P2G1 1089 aa11.79□□□□□ -0.52
ATXN3-205ENST00000454964 ZC3H4Q9UPT8 1303 aaKnown RBP11.79□□□□□ -0.52
ATXN3-205ENST00000454964 CACNA1SQ13698 1873 aa11.78□□□□□ -0.52
ATXN3-205ENST00000454964 GOLGB1Q14789 3259 aaKnown RBP11.78□□□□□ -0.52
ATXN3-205ENST00000454964 C21orf2O43822 256 aa11.78□□□□□ -0.52
ATXN3-205ENST00000454964 IL15P40933 162 aaPredicted RBP11.78□□□□□ -0.52
ATXN3-205ENST00000454964 G3BP1Q13283 466 aaKnown RBP eCLIP11.78□□□□□ -0.52
ATXN3-205ENST00000454964 DPP8Q6V1X1 898 aaPredicted RBP11.78□□□□□ -0.52
ATXN3-205ENST00000454964 ERC1Q8IUD2 1116 aa11.78□□□□□ -0.52
ATXN3-205ENST00000454964 JARID2Q92833 1246 aaPredicted RBP11.78□□□□□ -0.52
ATXN3-205ENST00000454964 TAOK3Q9H2K8 898 aa11.78□□□□□ -0.52
ATXN3-205ENST00000454964 COPRSQ9NQ92 184 aa11.78□□□□□ -0.52
ATXN3-205ENST00000454964 AKAP2Q9Y2D5 859 aa11.78□□□□□ -0.52
ATXN3-205ENST00000454964 XDHP47989 1333 aa11.78□□□□□ -0.52
ATXN3-205ENST00000454964 FER1L6Q2WGJ9 1857 aa11.77□□□□□ -0.53
ATXN3-205ENST00000454964 LMNB1P20700 586 aa11.77□□□□□ -0.53
ATXN3-205ENST00000454964 DSG3P32926 999 aa11.77□□□□□ -0.53
ATXN3-205ENST00000454964 FKBP4Q02790 459 aaKnown RBP eCLIP11.77□□□□□ -0.53
ATXN3-205ENST00000454964 FAM161AQ3B820 660 aa11.77□□□□□ -0.53
ATXN3-205ENST00000454964 ERICH6BQ5W0A0 696 aa11.77□□□□□ -0.53
ATXN3-205ENST00000454964 ANKRD44Q8N8A2 993 aa11.77□□□□□ -0.53
ATXN3-205ENST00000454964 SSH3Q8TE77 659 aa11.77□□□□□ -0.53
ATXN3-205ENST00000454964 KAZALD1Q96I82 304 aa11.77□□□□□ -0.53
ATXN3-205ENST00000454964 RTFDC1Q9BY42 306 aaPredicted RBP11.77□□□□□ -0.53
ATXN3-205ENST00000454964 NSFL1CQ9UNZ2 370 aaKnown RBP11.77□□□□□ -0.53
ATXN3-205ENST00000454964 COL11A2P13942 1736 aaPredicted RBP11.77□□□□□ -0.53
ATXN3-205ENST00000454964 TNRC6CQ9HCJ0 1690 aaKnown RBP11.76□□□□□ -0.53
ATXN3-205ENST00000454964 G3V3G9 751 aa11.76□□□□□ -0.53
ATXN3-205ENST00000454964 EYA2O00167 538 aa11.76□□□□□ -0.53
ATXN3-205ENST00000454964 KCNJ4P48050 445 aa11.76□□□□□ -0.53
ATXN3-205ENST00000454964 UBE4AQ14139 1066 aa11.76□□□□□ -0.53
ATXN3-205ENST00000454964 DCAF8Q5TAQ9 597 aa11.76□□□□□ -0.53
ATXN3-205ENST00000454964 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
ATXN3-205ENST00000454964 JDP2Q8WYK2 163 aa11.76□□□□□ -0.53
ATXN3-205ENST00000454964 CELF1Q92879 486 aaKnown RBP11.76□□□□□ -0.53
ATXN3-205ENST00000454964 ZC3H12CQ9C0D7 883 aaKnown RBP11.76□□□□□ -0.53
ATXN3-205ENST00000454964 SEC31BQ9NQW1 1179 aa11.76□□□□□ -0.53
ATXN3-205ENST00000454964 CEP126Q9P2H0 1117 aa11.76□□□□□ -0.53
ATXN3-205ENST00000454964 GGA1Q9UJY5 639 aa11.76□□□□□ -0.53
ATXN3-205ENST00000454964 TAF1P21675 1872 aa11.75□□□□□ -0.53
ATXN3-205ENST00000454964 CCDC88AQ3V6T2 1871 aa11.75□□□□□ -0.53
ATXN3-205ENST00000454964 RAB11FIP3O75154 756 aa11.75□□□□□ -0.53
ATXN3-205ENST00000454964 MMP14P50281 582 aa11.75□□□□□ -0.53
ATXN3-205ENST00000454964 EPHA10Q5JZY3 1008 aa11.75□□□□□ -0.53
ATXN3-205ENST00000454964 ZBTB47Q9UFB7 747 aaPredicted RBP11.75□□□□□ -0.53
ATXN3-205ENST00000454964 MINPP1Q9UNW1 487 aa11.75□□□□□ -0.53
ATXN3-205ENST00000454964 DICER1Q9UPY3 1922 aaKnown RBP11.75□□□□□ -0.53
ATXN3-205ENST00000454964 SBF1O95248 1867 aa11.74□□□□□ -0.53
ATXN3-205ENST00000454964 C6orf229H3BNL8 230 aa11.74□□□□□ -0.53
ATXN3-205ENST00000454964 IFIT1P09914 478 aaKnown RBP11.74□□□□□ -0.53
ATXN3-205ENST00000454964 PTPN12Q05209 780 aaKnown RBP11.74□□□□□ -0.53
ATXN3-205ENST00000454964 POLA2Q14181 598 aa11.74□□□□□ -0.53
ATXN3-205ENST00000454964 WASHC4Q2M389 1173 aa11.74□□□□□ -0.53
ATXN3-205ENST00000454964 DPY19L2Q6NUT2 758 aa11.74□□□□□ -0.53
ATXN3-205ENST00000454964 CEP85Q6P2H3 762 aa11.74□□□□□ -0.53
ATXN3-205ENST00000454964 CCDC85AQ96PX6 553 aaPredicted RBP11.74□□□□□ -0.53
ATXN3-205ENST00000454964 RWDD1Q9H446 243 aaPredicted RBP11.74□□□□□ -0.53
ATXN3-205ENST00000454964 NOP58Q9Y2X3 529 aaKnown RBP11.74□□□□□ -0.53
ATXN3-205ENST00000454964 RIPOR2Q9Y4F9 1068 aa11.74□□□□□ -0.53
ATXN3-205ENST00000454964 LRRC37AA6NMS7 1700 aa11.73□□□□□ -0.53
ATXN3-205ENST00000454964 SURF6O75683 361 aaKnown RBP11.73□□□□□ -0.53
ATXN3-205ENST00000454964 PDE8BO95263 885 aa11.73□□□□□ -0.53
ATXN3-205ENST00000454964 YBX3P16989 372 aaKnown RBP eCLIP11.73□□□□□ -0.53
ATXN3-205ENST00000454964 CHRNDQ07001 517 aa11.73□□□□□ -0.53
ATXN3-205ENST00000454964 OS9Q13438 667 aaPredicted RBP11.73□□□□□ -0.53
ATXN3-205ENST00000454964 CAVIN4Q5BKX8 364 aa11.73□□□□□ -0.53
ATXN3-205ENST00000454964 METTL24Q5JXM2 366 aa11.73□□□□□ -0.53
ATXN3-205ENST00000454964 C15orf52Q6ZUT6 534 aaKnown RBP11.73□□□□□ -0.53
ATXN3-205ENST00000454964 GPR108Q9NPR9 543 aa11.73□□□□□ -0.53
ATXN3-205ENST00000454964 TNNQ9UQP3 1299 aa11.73□□□□□ -0.53
ATXN3-205ENST00000454964 ZNF804BA4D1E1 1349 aa11.72□□□□□ -0.53
ATXN3-205ENST00000454964 IGSF3O75054 1194 aa11.72□□□□□ -0.53
ATXN3-205ENST00000454964 IARSP41252 1262 aaKnown RBP11.72□□□□□ -0.53
ATXN3-205ENST00000454964 RFX5P48382 616 aaPredicted RBP11.72□□□□□ -0.53
ATXN3-205ENST00000454964 PUM3Q15397 648 aaKnown RBP11.72□□□□□ -0.53
ATXN3-205ENST00000454964 C20orf194Q5TEA3 1177 aa11.72□□□□□ -0.53
ATXN3-205ENST00000454964 PODNQ7Z5L7 613 aa11.72□□□□□ -0.53
ATXN3-205ENST00000454964 TBC1D16Q8TBP0 767 aa11.72□□□□□ -0.53
ATXN3-205ENST00000454964 GCC1Q96CN9 775 aa11.72□□□□□ -0.53
ATXN3-205ENST00000454964 GNL3LQ9NVN8 582 aaKnown RBP11.72□□□□□ -0.53
ATXN3-205ENST00000454964 UFL1O94874 794 aa11.71□□□□□ -0.53
ATXN3-205ENST00000454964 SLC5A1P13866 664 aa11.71□□□□□ -0.53
ATXN3-205ENST00000454964 KIAA2012Q0VF49 1180 aa11.71□□□□□ -0.53
ATXN3-205ENST00000454964 TNIP1Q15025 636 aa11.71□□□□□ -0.53
ATXN3-205ENST00000454964 ZNF804AQ7Z570 1209 aa11.71□□□□□ -0.53
ATXN3-205ENST00000454964 NIM1KQ8IY84 436 aa11.71□□□□□ -0.53
ATXN3-205ENST00000454964 LARGE2Q8N3Y3 721 aa11.71□□□□□ -0.53
ATXN3-205ENST00000454964 LPIN2Q92539 896 aa11.71□□□□□ -0.53
ATXN3-205ENST00000454964 KIF1BPQ96EK5 621 aa11.71□□□□□ -0.53
ATXN3-205ENST00000454964 CRBNQ96SW2 442 aa11.71□□□□□ -0.53
ATXN3-205ENST00000454964 COA1Q9GZY4 146 aa11.71□□□□□ -0.53
ATXN3-205ENST00000454964 SPEF2Q9C093 1822 aa11.71□□□□□ -0.54
ATXN3-205ENST00000454964 MED23Q9ULK4 1368 aa11.7□□□□□ -0.54
ATXN3-205ENST00000454964 PPIP5K2O43314 1243 aa11.7□□□□□ -0.54
ATXN3-205ENST00000454964 EIF6P56537 245 aaKnown RBP11.7□□□□□ -0.54
ATXN3-205ENST00000454964 GPSM2P81274 684 aa11.7□□□□□ -0.54
ATXN3-205ENST00000454964 HDAC1Q13547 482 aaPredicted RBP11.7□□□□□ -0.54
ATXN3-205ENST00000454964 VPS37DQ86XT2 251 aa11.7□□□□□ -0.54
ATXN3-205ENST00000454964 CLASRPQ8N2M8 674 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms