RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 EGFRP00533 1210 aa8.1□□□□□ -1.11
CDH19-202ENST00000454642 PTPN12Q05209 780 aaKnown RBP8.1□□□□□ -1.11
CDH19-202ENST00000454642 SFSWAPQ12872 951 aaKnown RBP8.1□□□□□ -1.11
CDH19-202ENST00000454642 RIPOR1Q6ZS17 1223 aa8.1□□□□□ -1.11
CDH19-202ENST00000454642 DPH6Q7L8W6 267 aa8.1□□□□□ -1.11
CDH19-202ENST00000454642 SRCIN1Q9C0H9 1055 aa8.1□□□□□ -1.11
CDH19-202ENST00000454642 TTF2Q9UNY4 1162 aaKnown RBP8.1□□□□□ -1.11
CDH19-202ENST00000454642 WFS1O76024 890 aa8.09□□□□□ -1.11
CDH19-202ENST00000454642 EFHC2Q5JST6 749 aa8.09□□□□□ -1.11
CDH19-202ENST00000454642 NLRP8Q86W28 1048 aa8.09□□□□□ -1.11
CDH19-202ENST00000454642 SUV39H2Q9H5I1 410 aa8.09□□□□□ -1.11
CDH19-202ENST00000454642 SENP2Q9HC62 589 aa8.09□□□□□ -1.11
CDH19-202ENST00000454642 KCNH4Q9UQ05 1017 aa8.09□□□□□ -1.11
CDH19-202ENST00000454642 LAMC3Q9Y6N6 1575 aa8.09□□□□□ -1.11
CDH19-202ENST00000454642 PEG3Q9GZU2 1588 aa8.08□□□□□ -1.12
CDH19-202ENST00000454642 KHNYNO15037 678 aaKnown RBP8.08□□□□□ -1.12
CDH19-202ENST00000454642 MMP20O60882 483 aa8.08□□□□□ -1.12
CDH19-202ENST00000454642 FCGRTP55899 365 aa8.08□□□□□ -1.12
CDH19-202ENST00000454642 ARID5AQ03989 594 aa8.08□□□□□ -1.12
CDH19-202ENST00000454642 GRIN2CQ14957 1233 aa8.08□□□□□ -1.12
CDH19-202ENST00000454642 PMEPA1Q969W9 287 aa8.08□□□□□ -1.12
CDH19-202ENST00000454642 SMARCA4P51532 1647 aa8.08□□□□□ -1.12
CDH19-202ENST00000454642 SENP3-EIF4A1A0A087X0R7 540 aa8.08□□□□□ -1.12
CDH19-202ENST00000454642 A0A1W2PP55 124 aa8.08□□□□□ -1.12
CDH19-202ENST00000454642 RARAP10276 462 aa8.08□□□□□ -1.12
CDH19-202ENST00000454642 SNRPBP14678 240 aaKnown RBP8.08□□□□□ -1.12
CDH19-202ENST00000454642 GSTT1P30711 240 aa8.08□□□□□ -1.12
CDH19-202ENST00000454642 ST13P50502 369 aaKnown RBP8.08□□□□□ -1.12
CDH19-202ENST00000454642 PEAR1Q5VY43 1037 aaPredicted RBP8.08□□□□□ -1.12
CDH19-202ENST00000454642 KBTBD4Q9NVX7 518 aa8.08□□□□□ -1.12
CDH19-202ENST00000454642 SOBPA7XYQ1 873 aa8.07□□□□□ -1.12
CDH19-202ENST00000454642 PHF20L1A8MW92 1017 aa8.07□□□□□ -1.12
CDH19-202ENST00000454642 ATXN7O15265 892 aaPredicted RBP8.07□□□□□ -1.12
CDH19-202ENST00000454642 MAN1A2O60476 641 aa8.07□□□□□ -1.12
CDH19-202ENST00000454642 FBXO24O75426 580 aa8.07□□□□□ -1.12
CDH19-202ENST00000454642 CCINQ13939 588 aa8.07□□□□□ -1.12
CDH19-202ENST00000454642 SAMD5Q5TGI4 173 aa8.07□□□□□ -1.12
CDH19-202ENST00000454642 GSX2Q9BZM3 304 aa8.07□□□□□ -1.12
CDH19-202ENST00000454642 PPP4R2Q9NY27 417 aa8.07□□□□□ -1.12
CDH19-202ENST00000454642 ZFATQ9P243 1243 aa8.07□□□□□ -1.12
CDH19-202ENST00000454642 EDN3P14138 238 aa8.06□□□□□ -1.12
CDH19-202ENST00000454642 PAK2Q13177 524 aa8.06□□□□□ -1.12
CDH19-202ENST00000454642 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.06□□□□□ -1.12
CDH19-202ENST00000454642 ERMP1Q7Z2K6 904 aa8.06□□□□□ -1.12
CDH19-202ENST00000454642 RAB44Q7Z6P3 723 aaPredicted RBP8.06□□□□□ -1.12
CDH19-202ENST00000454642 GLIS3Q8NEA6 775 aa8.06□□□□□ -1.12
CDH19-202ENST00000454642 PMFBP1Q8TBY8 1022 aa8.06□□□□□ -1.12
CDH19-202ENST00000454642 KIFC2Q96AC6 838 aa8.06□□□□□ -1.12
CDH19-202ENST00000454642 PNMA5Q96PV4 448 aa8.06□□□□□ -1.12
CDH19-202ENST00000454642 TRIM56Q9BRZ2 755 aaKnown RBP8.06□□□□□ -1.12
CDH19-202ENST00000454642 AKAP2Q9Y2D5 859 aa8.06□□□□□ -1.12
CDH19-202ENST00000454642 WIPF1O43516 503 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 THBS1P07996 1170 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 VEGFBP49765 207 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 CCDC85BQ15834 202 aaPredicted RBP8.05□□□□□ -1.12
CDH19-202ENST00000454642 KIAA0319Q5VV43 1072 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 C3orf58Q8NDZ4 430 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 GMLQ99445 158 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 LNPKQ9C0E8 428 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 STRN4Q9NRL3 753 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 MINDY4BA8MYZ0 360 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 TRPA1O75762 1119 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 ACPPP15309 386 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 NFKB1P19838 968 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 KCNQ4P56696 695 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 MAP3K11Q16584 847 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 NCAPG2Q86XI2 1143 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 VPS37DQ86XT2 251 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 OR13H1Q8NG92 308 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 OXCT2Q9BYC2 517 aaPredicted RBP8.05□□□□□ -1.12
CDH19-202ENST00000454642 TRAK1Q9UPV9 953 aa8.05□□□□□ -1.12
CDH19-202ENST00000454642 BAZ1AQ9NRL2 1556 aaPredicted RBP8.04□□□□□ -1.12
CDH19-202ENST00000454642 EFSO43281 561 aa8.04□□□□□ -1.12
CDH19-202ENST00000454642 LCE2CQ5TA81 110 aa8.04□□□□□ -1.12
CDH19-202ENST00000454642 COL13A1Q5TAT6 717 aaPredicted RBP8.04□□□□□ -1.12
CDH19-202ENST00000454642 FIGNL1Q6PIW4 674 aa8.04□□□□□ -1.12
CDH19-202ENST00000454642 DTHD1Q6ZMT9 781 aa8.04□□□□□ -1.12
CDH19-202ENST00000454642 LIN7BQ9HAP6 207 aa8.04□□□□□ -1.12
CDH19-202ENST00000454642 SALL4Q9UJQ4 1053 aa8.04□□□□□ -1.12
CDH19-202ENST00000454642 PCDHGC4Q9Y5F7 938 aa8.04□□□□□ -1.12
CDH19-202ENST00000454642 FAM157BP0CG42 384 aa8.03□□□□□ -1.12
CDH19-202ENST00000454642 MAPTP10636 758 aaKnown RBP8.03□□□□□ -1.12
CDH19-202ENST00000454642 GIMAP6Q6P9H5 292 aa8.03□□□□□ -1.12
CDH19-202ENST00000454642 MCF2L2Q86YR7 1114 aa8.03□□□□□ -1.12
CDH19-202ENST00000454642 GPRASP2Q96D09 838 aa8.03□□□□□ -1.12
CDH19-202ENST00000454642 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDH19-202ENST00000454642 NUCKS1Q9H1E3 243 aaKnown RBP8.03□□□□□ -1.12
CDH19-202ENST00000454642 C11orf16Q9NQ32 467 aa8.03□□□□□ -1.12
CDH19-202ENST00000454642 BAZ1BQ9UIG0 1483 aaKnown RBP8.03□□□□□ -1.12
CDH19-202ENST00000454642 TERTO14746 1132 aaKnown RBP8.02□□□□□ -1.13
CDH19-202ENST00000454642 TPTE2Q6XPS3 522 aa8.02□□□□□ -1.13
CDH19-202ENST00000454642 BHMTQ93088 406 aa8.02□□□□□ -1.13
CDH19-202ENST00000454642 SPATA32Q96LK8 384 aa8.02□□□□□ -1.13
CDH19-202ENST00000454642 NSUN5Q96P11 429 aaKnown RBP8.02□□□□□ -1.13
CDH19-202ENST00000454642 OSMRQ99650 979 aa8.02□□□□□ -1.13
CDH19-202ENST00000454642 ZKSCAN3Q9BRR0 538 aa8.02□□□□□ -1.13
CDH19-202ENST00000454642 SPON2Q9BUD6 331 aa8.02□□□□□ -1.13
CDH19-202ENST00000454642 ABCB6Q9NP58 842 aa8.02□□□□□ -1.13
CDH19-202ENST00000454642 HCN2Q9UL51 889 aa8.02□□□□□ -1.13
CDH19-202ENST00000454642 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms