RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 ATP5JP18859 108 aa14.14□□□□□ -0.15
SMPD4-213ENST00000454468 CCDC183Q5T5S1 534 aa14.14□□□□□ -0.15
SMPD4-213ENST00000454468 TNMDQ9H2S6 317 aa14.14□□□□□ -0.15
SMPD4-213ENST00000454468 CYP21A2P08686 494 aa14.14□□□□□ -0.15
SMPD4-213ENST00000454468 ABCF2Q9UG63 623 aa14.14□□□□□ -0.15
SMPD4-213ENST00000454468 MTMR6Q9Y217 621 aa14.14□□□□□ -0.15
SMPD4-213ENST00000454468 WDR17Q8IZU2 1322 aa14.14□□□□□ -0.15
SMPD4-213ENST00000454468 ME1P48163 572 aa14.14□□□□□ -0.15
SMPD4-213ENST00000454468 UBE2HP62256 183 aa14.14□□□□□ -0.15
SMPD4-213ENST00000454468 KRT32Q14532 448 aa14.14□□□□□ -0.15
SMPD4-213ENST00000454468 CCDC24Q8N4L8 307 aa14.14□□□□□ -0.15
SMPD4-213ENST00000454468 TTC14Q96N46 770 aa14.14□□□□□ -0.15
SMPD4-213ENST00000454468 GPHNQ9NQX3 736 aaPredicted RBP14.14□□□□□ -0.15
SMPD4-213ENST00000454468 ZNF445P59923 1031 aa14.13□□□□□ -0.15
SMPD4-213ENST00000454468 PIGBQ92521 554 aa14.13□□□□□ -0.15
SMPD4-213ENST00000454468 XAGE2Q96GT9 111 aa14.13□□□□□ -0.15
SMPD4-213ENST00000454468 ZAP70P43403 619 aa14.13□□□□□ -0.15
SMPD4-213ENST00000454468 ATP2B3Q16720 1220 aa14.13□□□□□ -0.15
SMPD4-213ENST00000454468 KBTBD3Q8NAB2 608 aa14.13□□□□□ -0.15
SMPD4-213ENST00000454468 DACT1Q9NYF0 836 aa14.13□□□□□ -0.15
SMPD4-213ENST00000454468 KDM6AO15550 1401 aaPredicted RBP14.13□□□□□ -0.15
SMPD4-213ENST00000454468 HLFQ16534 295 aa14.13□□□□□ -0.15
SMPD4-213ENST00000454468 ERCC4Q92889 916 aaPredicted RBP14.13□□□□□ -0.15
SMPD4-213ENST00000454468 NUP62CLQ9H1M0 184 aa14.13□□□□□ -0.15
SMPD4-213ENST00000454468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.13□□□□□ -0.15
SMPD4-213ENST00000454468 SLC4A8Q2Y0W8 1093 aa14.12□□□□□ -0.15
SMPD4-213ENST00000454468 SASS6Q6UVJ0 657 aa14.12□□□□□ -0.15
SMPD4-213ENST00000454468 TTC12Q9H892 705 aaPredicted RBP14.12□□□□□ -0.15
SMPD4-213ENST00000454468 MTMR7Q9Y216 660 aa14.12□□□□□ -0.15
SMPD4-213ENST00000454468 IRS4O14654 1257 aaPredicted RBP14.12□□□□□ -0.15
SMPD4-213ENST00000454468 ITGA6P23229 1130 aa14.12□□□□□ -0.15
SMPD4-213ENST00000454468 SLC9C2Q5TAH2 1124 aa14.12□□□□□ -0.15
SMPD4-213ENST00000454468 C17orf53Q8N3J3 647 aaPredicted RBP14.12□□□□□ -0.15
SMPD4-213ENST00000454468 CCDC191Q8NCU4 936 aa14.12□□□□□ -0.15
SMPD4-213ENST00000454468 FAM13BQ9NYF5 915 aa14.12□□□□□ -0.15
SMPD4-213ENST00000454468 ZBTB1Q9Y2K1 713 aa14.12□□□□□ -0.15
SMPD4-213ENST00000454468 ANKRD18BA2A2Z9 1011 aa14.11□□□□□ -0.15
SMPD4-213ENST00000454468 ADCY5O95622 1261 aa14.11□□□□□ -0.15
SMPD4-213ENST00000454468 SMIM5Q71RC9 77 aa14.11□□□□□ -0.15
SMPD4-213ENST00000454468 VPS37DQ86XT2 251 aa14.11□□□□□ -0.15
SMPD4-213ENST00000454468 DZIP3Q86Y13 1208 aaKnown RBP14.11□□□□□ -0.15
SMPD4-213ENST00000454468 FTOQ9C0B1 505 aaKnown RBP eCLIP14.11□□□□□ -0.15
SMPD4-213ENST00000454468 HEG1Q9ULI3 1381 aa14.11□□□□□ -0.15
SMPD4-213ENST00000454468 A0A087WWV3 80 aa14.11□□□□□ -0.15
SMPD4-213ENST00000454468 CLCN1P35523 988 aa14.11□□□□□ -0.15
SMPD4-213ENST00000454468 IMMTQ16891 758 aaKnown RBP14.11□□□□□ -0.15
SMPD4-213ENST00000454468 SDF4Q9BRK5 362 aa14.11□□□□□ -0.15
SMPD4-213ENST00000454468 TRIM5Q9C035 493 aa14.11□□□□□ -0.15
SMPD4-213ENST00000454468 GREM2Q9H772 168 aa14.11□□□□□ -0.15
SMPD4-213ENST00000454468 TCIRG1Q13488 830 aa14.1□□□□□ -0.15
SMPD4-213ENST00000454468 AKAP2Q9Y2D5 859 aa14.1□□□□□ -0.15
SMPD4-213ENST00000454468 KIF3AQ9Y496 699 aa14.1□□□□□ -0.15
SMPD4-213ENST00000454468 GOLGA8BA8MQT2 603 aa14.1□□□□□ -0.15
SMPD4-213ENST00000454468 BECN2A8MW95 431 aa14.1□□□□□ -0.15
SMPD4-213ENST00000454468 RNF113AO15541 343 aaKnown RBP14.1□□□□□ -0.15
SMPD4-213ENST00000454468 LIG1P18858 919 aa14.1□□□□□ -0.15
SMPD4-213ENST00000454468 ATP6V1AP38606 617 aa14.1□□□□□ -0.15
SMPD4-213ENST00000454468 LRRFIP1Q32MZ4 808 aaKnown RBP14.1□□□□□ -0.15
SMPD4-213ENST00000454468 ISM2Q6H9L7 571 aa14.1□□□□□ -0.15
SMPD4-213ENST00000454468 TTC6Q86TZ1 520 aa14.1□□□□□ -0.15
SMPD4-213ENST00000454468 HAUS7Q99871 368 aa14.1□□□□□ -0.15
SMPD4-213ENST00000454468 HMG20BQ9P0W2 317 aa14.1□□□□□ -0.15
SMPD4-213ENST00000454468 NWD1Q149M9 1564 aa14.09□□□□□ -0.15
SMPD4-213ENST00000454468 ZNF213O14771 459 aa14.09□□□□□ -0.15
SMPD4-213ENST00000454468 CCDC192P0DO97 292 aa14.09□□□□□ -0.15
SMPD4-213ENST00000454468 PIBF1Q8WXW3 757 aa14.09□□□□□ -0.15
SMPD4-213ENST00000454468 CCDC39Q9UFE4 941 aa14.09□□□□□ -0.15
SMPD4-213ENST00000454468 ERVV-2B6SEH9 535 aa14.09□□□□□ -0.15
SMPD4-213ENST00000454468 FOXO4P98177 505 aa14.09□□□□□ -0.15
SMPD4-213ENST00000454468 CCDC73Q6ZRK6 1079 aa14.09□□□□□ -0.15
SMPD4-213ENST00000454468 MICU3Q86XE3 530 aa14.09□□□□□ -0.15
SMPD4-213ENST00000454468 KLF18A0A0U1RQI7 1052 aa14.09□□□□□ -0.15
SMPD4-213ENST00000454468 SCARF1Q14162 830 aa14.09□□□□□ -0.15
SMPD4-213ENST00000454468 MAP3K11Q16584 847 aa14.09□□□□□ -0.15
SMPD4-213ENST00000454468 AIDAQ96BJ3 306 aa14.09□□□□□ -0.15
SMPD4-213ENST00000454468 JAG2Q9Y219 1238 aa14.09□□□□□ -0.15
SMPD4-213ENST00000454468 PTPDC1A2A3K4 754 aa14.08□□□□□ -0.15
SMPD4-213ENST00000454468 GOLGA6L19H0YKK7 550 aa14.08□□□□□ -0.15
SMPD4-213ENST00000454468 HSPD1P10809 573 aaKnown RBP14.08□□□□□ -0.15
SMPD4-213ENST00000454468 H7C1W4 665 aa14.08□□□□□ -0.16
SMPD4-213ENST00000454468 RFX5P48382 616 aaPredicted RBP14.08□□□□□ -0.16
SMPD4-213ENST00000454468 TOB2Q14106 344 aaPredicted RBP14.08□□□□□ -0.16
SMPD4-213ENST00000454468 DHX32Q7L7V1 743 aaKnown RBP14.08□□□□□ -0.16
SMPD4-213ENST00000454468 NCAPD2Q15021 1401 aa14.08□□□□□ -0.16
SMPD4-213ENST00000454468 FAM182BQ5T319 152 aa14.08□□□□□ -0.16
SMPD4-213ENST00000454468 SYNE3Q6ZMZ3 975 aa14.08□□□□□ -0.16
SMPD4-213ENST00000454468 MIGA1Q8NAN2 632 aa14.08□□□□□ -0.16
SMPD4-213ENST00000454468 NUP133Q8WUM0 1156 aa14.08□□□□□ -0.16
SMPD4-213ENST00000454468 CARD10Q9BWT7 1032 aa14.08□□□□□ -0.16
SMPD4-213ENST00000454468 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.08□□□□□ -0.161e-6■■■□□ 17.9
SMPD4-213ENST00000454468 GJB4Q9NTQ9 266 aa14.08□□□□□ -0.16
SMPD4-213ENST00000454468 LRP2BPQ9P2M1 347 aa14.08□□□□□ -0.16
SMPD4-213ENST00000454468 TOPAZ1Q8N9V7 1692 aa14.07□□□□□ -0.16
SMPD4-213ENST00000454468 MINDY4BA8MYZ0 360 aa14.07□□□□□ -0.16
SMPD4-213ENST00000454468 STK38Q15208 465 aa14.07□□□□□ -0.16
SMPD4-213ENST00000454468 LUZP1Q86V48 1076 aa14.07□□□□□ -0.16
SMPD4-213ENST00000454468 OSBP2Q969R2 916 aa14.07□□□□□ -0.16
SMPD4-213ENST00000454468 TM6SF1Q9BZW5 370 aa14.07□□□□□ -0.16
SMPD4-213ENST00000454468 E7EWF7 191 aa14.07□□□□□ -0.16
SMPD4-213ENST00000454468 M0R2C6 588 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms