RNA–Protein interactions for RNA: ENST00000454141.5

SEC22C-212, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-212ENST00000454141 ZBTB12Q9Y330 459 aaPredicted RBP23.46■■□□□ 1.35
SEC22C-212ENST00000454141 NEURL1BA8MQ27 555 aa23.45■■□□□ 1.34
SEC22C-212ENST00000454141 H7C1D1 291 aa23.45■■□□□ 1.34
SEC22C-212ENST00000454141 FLIIQ13045 1269 aa23.45■■□□□ 1.34
SEC22C-212ENST00000454141 DOK7Q18PE1 504 aa23.45■■□□□ 1.34
SEC22C-212ENST00000454141 ANKRD18AQ8IVF6 992 aa23.45■■□□□ 1.34
SEC22C-212ENST00000454141 MICALL2Q8IY33 904 aa23.45■■□□□ 1.34
SEC22C-212ENST00000454141 ZC3H15Q8WU90 426 aaKnown RBP23.45■■□□□ 1.34
SEC22C-212ENST00000454141 DPF2Q92785 391 aa23.45■■□□□ 1.34
SEC22C-212ENST00000454141 ZC3H12CQ9C0D7 883 aaKnown RBP23.45■■□□□ 1.34
SEC22C-212ENST00000454141 PGAP2Q9UHJ9 254 aa23.45■■□□□ 1.34
SEC22C-212ENST00000454141 GGA1Q9UJY5 639 aa23.45■■□□□ 1.34
SEC22C-212ENST00000454141 RTL9Q8NET4 1388 aa23.44■■□□□ 1.34
SEC22C-212ENST00000454141 SHTN1A0MZ66 631 aa23.44■■□□□ 1.34
SEC22C-212ENST00000454141 HIRAP54198 1017 aaPredicted RBP23.44■■□□□ 1.34
SEC22C-212ENST00000454141 RPS12P25398 132 aaKnown RBP23.43■■□□□ 1.34
SEC22C-212ENST00000454141 CST9Q5W186 159 aa23.43■■□□□ 1.34
SEC22C-212ENST00000454141 TNS4Q8IZW8 715 aa23.43■■□□□ 1.34
SEC22C-212ENST00000454141 CDC5LQ99459 802 aaKnown RBP23.43■■□□□ 1.34
SEC22C-212ENST00000454141 XDHP47989 1333 aa23.42■■□□□ 1.34
SEC22C-212ENST00000454141 FOXN1O15353 648 aa23.42■■□□□ 1.34
SEC22C-212ENST00000454141 FKBP5Q13451 457 aaPredicted RBP23.42■■□□□ 1.34
SEC22C-212ENST00000454141 TTLL11Q8NHH1 800 aa23.42■■□□□ 1.34
SEC22C-212ENST00000454141 GLIS2Q9BZE0 524 aaPredicted RBP23.42■■□□□ 1.34
SEC22C-212ENST00000454141 KCNQ5Q9NR82 932 aa23.42■■□□□ 1.34
SEC22C-212ENST00000454141 WDR33Q9C0J8 1336 aaKnown RBP23.41■■□□□ 1.34
SEC22C-212ENST00000454141 UBE3BQ7Z3V4 1068 aa23.41■■□□□ 1.34
SEC22C-212ENST00000454141 AIDAQ96BJ3 306 aa23.41■■□□□ 1.34
SEC22C-212ENST00000454141 GREM2Q9H772 168 aa23.41■■□□□ 1.34
SEC22C-212ENST00000454141 G3V3G9 751 aa23.4■■□□□ 1.34
SEC22C-212ENST00000454141 H7C1W4 665 aa23.4■■□□□ 1.34
SEC22C-212ENST00000454141 VAMP4O75379 141 aa23.4■■□□□ 1.34
SEC22C-212ENST00000454141 EXOSC9Q06265 439 aaKnown RBP23.4■■□□□ 1.34
SEC22C-212ENST00000454141 DCAF8Q5TAQ9 597 aa23.4■■□□□ 1.34
SEC22C-212ENST00000454141 TLL2Q9Y6L7 1015 aa23.4■■□□□ 1.34
SEC22C-212ENST00000454141 CELF2O95319 508 aaKnown RBP23.39■■□□□ 1.33
SEC22C-212ENST00000454141 GCKRQ14397 625 aa23.39■■□□□ 1.33
SEC22C-212ENST00000454141 PAXIP1Q6ZW49 1069 aaPredicted RBP23.39■■□□□ 1.33
SEC22C-212ENST00000454141 CDC37L1Q7L3B6 337 aa23.39■■□□□ 1.33
SEC22C-212ENST00000454141 SAMD7Q7Z3H4 446 aa23.39■■□□□ 1.33
SEC22C-212ENST00000454141 FAM9BQ8IZU0 186 aa23.39■■□□□ 1.33
SEC22C-212ENST00000454141 DNAAF4Q8WXU2 420 aa23.39■■□□□ 1.33
SEC22C-212ENST00000454141 MYH16Q9H6N6 1097 aa23.39■■□□□ 1.33
SEC22C-212ENST00000454141 WBP1LQ9NX94 342 aa23.39■■□□□ 1.33
SEC22C-212ENST00000454141 VIL1P09327 827 aaKnown RBP23.38■■□□□ 1.33
SEC22C-212ENST00000454141 ATP2B4P23634 1241 aa23.38■■□□□ 1.33
SEC22C-212ENST00000454141 TBC1D10BQ4KMP7 808 aaPredicted RBP23.38■■□□□ 1.33
SEC22C-212ENST00000454141 CAPNS2Q96L46 248 aa23.38■■□□□ 1.33
SEC22C-212ENST00000454141 BSDC1Q9NW68 430 aaPredicted RBP23.38■■□□□ 1.33
SEC22C-212ENST00000454141 TRPM7Q96QT4 1865 aa23.38■■□□□ 1.33
SEC22C-212ENST00000454141 ECE1P42892 770 aa23.37■■□□□ 1.33
SEC22C-212ENST00000454141 LINS1Q8NG48 757 aa23.37■■□□□ 1.33
SEC22C-212ENST00000454141 SPINK5Q9NQ38 1064 aaPredicted RBP23.37■■□□□ 1.33
SEC22C-212ENST00000454141 THSD7BQ9C0I4 1608 aa23.37■■□□□ 1.33
SEC22C-212ENST00000454141 ZNF609O15014 1411 aa23.36■■□□□ 1.33
SEC22C-212ENST00000454141 EGFRP00533 1210 aa23.36■■□□□ 1.33
SEC22C-212ENST00000454141 CTCFP49711 727 aaPredicted RBP23.36■■□□□ 1.33
SEC22C-212ENST00000454141 CYP4F22Q6NT55 531 aa23.36■■□□□ 1.33
SEC22C-212ENST00000454141 PLA2G12BQ9BX93 195 aa23.36■■□□□ 1.33
SEC22C-212ENST00000454141 ZNF408Q9H9D4 720 aa23.36■■□□□ 1.33
SEC22C-212ENST00000454141 MINPP1Q9UNW1 487 aa23.36■■□□□ 1.33
SEC22C-212ENST00000454141 MYH3P11055 1940 aa23.35■■□□□ 1.33
SEC22C-212ENST00000454141 CASP7P55210 303 aa23.35■■□□□ 1.33
SEC22C-212ENST00000454141 MAP2K1Q02750 393 aaPredicted RBP23.35■■□□□ 1.33
SEC22C-212ENST00000454141 SAPCD2Q86UD0 394 aa23.35■■□□□ 1.33
SEC22C-212ENST00000454141 MED23Q9ULK4 1368 aa23.35■■□□□ 1.33
SEC22C-212ENST00000454141 SCN9AQ15858 1988 aa23.34■■□□□ 1.33
SEC22C-212ENST00000454141 GRM1Q13255 1194 aa23.34■■□□□ 1.33
SEC22C-212ENST00000454141 RBM26Q5T8P6 1007 aaKnown RBP23.34■■□□□ 1.33
SEC22C-212ENST00000454141 USP48Q86UV5 1035 aa23.34■■□□□ 1.33
SEC22C-212ENST00000454141 PRDM10Q9NQV6 1147 aa23.34■■□□□ 1.33
SEC22C-212ENST00000454141 ITGA6P23229 1130 aa23.33■■□□□ 1.33
SEC22C-212ENST00000454141 IGHMBP2P38935 993 aaKnown RBP23.33■■□□□ 1.33
SEC22C-212ENST00000454141 KIF4BQ2VIQ3 1234 aa23.33■■□□□ 1.33
SEC22C-212ENST00000454141 FAM161AQ3B820 660 aa23.33■■□□□ 1.33
SEC22C-212ENST00000454141 RSBN1LQ6PCB5 846 aaPredicted RBP23.33■■□□□ 1.33
SEC22C-212ENST00000454141 WTIPA6NIX2 430 aaPredicted RBP23.32■■□□□ 1.32
SEC22C-212ENST00000454141 CCT4P50991 539 aaKnown RBP23.32■■□□□ 1.32
SEC22C-212ENST00000454141 KRT26Q7Z3Y9 468 aa23.32■■□□□ 1.32
SEC22C-212ENST00000454141 PODNQ7Z5L7 613 aa23.32■■□□□ 1.32
SEC22C-212ENST00000454141 AGBL3Q8NEM8 1001 aa23.32■■□□□ 1.32
SEC22C-212ENST00000454141 HHIPL1Q96JK4 782 aa23.32■■□□□ 1.32
SEC22C-212ENST00000454141 SPEF2Q9C093 1822 aa23.31■■□□□ 1.32
SEC22C-212ENST00000454141 CSF1RP07333 972 aa23.31■■□□□ 1.32
SEC22C-212ENST00000454141 DCPSQ96C86 337 aaKnown RBP23.31■■□□□ 1.32
SEC22C-212ENST00000454141 USP17L3A6NCW0 530 aa23.3■■□□□ 1.32
SEC22C-212ENST00000454141 USP17L4A6NCW7 530 aa23.3■■□□□ 1.32
SEC22C-212ENST00000454141 F6X3S4 739 aa23.3■■□□□ 1.32
SEC22C-212ENST00000454141 USP17L1Q7RTZ2 530 aa23.3■■□□□ 1.32
SEC22C-212ENST00000454141 CACNA1FO60840 1977 aa23.29■■□□□ 1.32
SEC22C-212ENST00000454141 CAPN15O75808 1086 aa23.29■■□□□ 1.32
SEC22C-212ENST00000454141 LBX1P52954 281 aa23.29■■□□□ 1.32
SEC22C-212ENST00000454141 ZNF280AP59817 542 aaPredicted RBP23.29■■□□□ 1.32
SEC22C-212ENST00000454141 BEND3Q5T5X7 828 aa23.29■■□□□ 1.32
SEC22C-212ENST00000454141 DLK2Q6UY11 383 aa23.29■■□□□ 1.32
SEC22C-212ENST00000454141 GMLQ99445 158 aa23.29■■□□□ 1.32
SEC22C-212ENST00000454141 MPHOSPH8Q99549 860 aa23.29■■□□□ 1.32
SEC22C-212ENST00000454141 GGA3Q9NZ52 723 aa23.29■■□□□ 1.32
SEC22C-212ENST00000454141 ADM5C9JUS6 153 aa23.28■■□□□ 1.32
SEC22C-212ENST00000454141 HSPA8P11142 646 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms