RNA–Protein interactions for RNA: ENST00000454043.1

LINC00299-204, long intergenic non-protein coding RNA 299, humanhuman

TSL 4

Gene LINC00299, Length 591 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-204ENST00000454043 AGBL1Q96MI9 1066 aa9.91□□□□□ -0.82
LINC00299-204ENST00000454043 RCAN3Q9UKA8 241 aa9.91□□□□□ -0.82
LINC00299-204ENST00000454043 TBC1D2BQ9UPU7 963 aa9.91□□□□□ -0.82
LINC00299-204ENST00000454043 ZNF330Q9Y3S2 320 aaPredicted RBP9.91□□□□□ -0.82
LINC00299-204ENST00000454043 ZBTB7CA1YPR0 619 aa9.9□□□□□ -0.82
LINC00299-204ENST00000454043 TRMT2AQ8IZ69 625 aaKnown RBP9.9□□□□□ -0.82
LINC00299-204ENST00000454043 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.9□□□□□ -0.82
LINC00299-204ENST00000454043 KDF1Q8NAX2 398 aaPredicted RBP9.9□□□□□ -0.82
LINC00299-204ENST00000454043 GAS2L2Q8NHY3 880 aa9.9□□□□□ -0.82
LINC00299-204ENST00000454043 LRRC59Q96AG4 307 aaKnown RBP9.9□□□□□ -0.82
LINC00299-204ENST00000454043 PRM3Q9NNZ6 103 aa9.9□□□□□ -0.82
LINC00299-204ENST00000454043 DNMT3LQ9UJW3 386 aa9.9□□□□□ -0.82
LINC00299-204ENST00000454043 RRP7AQ9Y3A4 280 aaKnown RBP9.9□□□□□ -0.82
LINC00299-204ENST00000454043 IGSF1Q8N6C5 1336 aa9.89□□□□□ -0.83
LINC00299-204ENST00000454043 SLIT3O75094 1523 aa9.89□□□□□ -0.83
LINC00299-204ENST00000454043 TTLL8A6PVC2 850 aa9.89□□□□□ -0.83
LINC00299-204ENST00000454043 WIPF1O43516 503 aa9.89□□□□□ -0.83
LINC00299-204ENST00000454043 CT47B1P0C2W7 299 aaPredicted RBP9.89□□□□□ -0.83
LINC00299-204ENST00000454043 RELBQ01201 579 aa9.89□□□□□ -0.83
LINC00299-204ENST00000454043 RNF20Q5VTR2 975 aa9.89□□□□□ -0.83
LINC00299-204ENST00000454043 DUSP27Q5VZP5 1158 aa9.89□□□□□ -0.83
LINC00299-204ENST00000454043 ZNF592Q92610 1267 aa9.89□□□□□ -0.83
LINC00299-204ENST00000454043 IQSEC2Q5JU85 1478 aa9.89□□□□□ -0.83
LINC00299-204ENST00000454043 PXDNQ92626 1479 aa9.89□□□□□ -0.83
LINC00299-204ENST00000454043 H3BM21 787 aa9.88□□□□□ -0.83
LINC00299-204ENST00000454043 HTATSF1O43719 755 aaKnown RBP9.88□□□□□ -0.83
LINC00299-204ENST00000454043 VEGFBP49765 207 aa9.88□□□□□ -0.83
LINC00299-204ENST00000454043 IRF5Q13568 498 aa9.88□□□□□ -0.83
LINC00299-204ENST00000454043 RTF1Q92541 710 aaKnown RBP9.88□□□□□ -0.83
LINC00299-204ENST00000454043 DDX17Q92841 729 aaKnown RBP9.88□□□□□ -0.83
LINC00299-204ENST00000454043 LTV1Q96GA3 475 aaPredicted RBP9.88□□□□□ -0.83
LINC00299-204ENST00000454043 XIRP1Q702N8 1843 aaKnown RBP9.88□□□□□ -0.83
LINC00299-204ENST00000454043 KDRP35968 1356 aa9.88□□□□□ -0.83
LINC00299-204ENST00000454043 TRPM3Q9HCF6 1732 aaPredicted RBP9.87□□□□□ -0.83
LINC00299-204ENST00000454043 NFAT5O94916 1531 aa9.87□□□□□ -0.83
LINC00299-204ENST00000454043 FIGNL2A6NMB9 653 aa9.87□□□□□ -0.83
LINC00299-204ENST00000454043 ADH1AP07327 375 aa9.87□□□□□ -0.83
LINC00299-204ENST00000454043 PTGIRP43119 386 aa9.87□□□□□ -0.83
LINC00299-204ENST00000454043 ZC3H6P61129 1189 aaKnown RBP9.87□□□□□ -0.83
LINC00299-204ENST00000454043 GNAI1P63096 354 aa9.87□□□□□ -0.83
LINC00299-204ENST00000454043 PHACTR3Q96KR7 559 aa9.87□□□□□ -0.83
LINC00299-204ENST00000454043 ZNF395Q9H8N7 513 aaPredicted RBP9.87□□□□□ -0.83
LINC00299-204ENST00000454043 CPDO75976 1380 aa9.87□□□□□ -0.83
LINC00299-204ENST00000454043 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.86□□□□□ -0.83
LINC00299-204ENST00000454043 AMOTQ4VCS5 1084 aa9.86□□□□□ -0.83
LINC00299-204ENST00000454043 ANKRD24Q8TF21 1146 aa9.86□□□□□ -0.83
LINC00299-204ENST00000454043 CYLDQ9NQC7 956 aa9.86□□□□□ -0.83
LINC00299-204ENST00000454043 CEP126Q9P2H0 1117 aa9.86□□□□□ -0.83
LINC00299-204ENST00000454043 LTBP4Q8N2S1 1624 aa9.85□□□□□ -0.83
LINC00299-204ENST00000454043 RNF123Q5XPI4 1314 aa9.85□□□□□ -0.83
LINC00299-204ENST00000454043 CTSOP43234 321 aaPredicted RBP9.85□□□□□ -0.83
LINC00299-204ENST00000454043 PLEKHO1Q53GL0 409 aaPredicted RBP9.85□□□□□ -0.83
LINC00299-204ENST00000454043 AEBP1Q8IUX7 1158 aa9.85□□□□□ -0.83
LINC00299-204ENST00000454043 ZNF428Q96B54 188 aa9.85□□□□□ -0.83
LINC00299-204ENST00000454043 INSM2Q96T92 566 aaPredicted RBP9.85□□□□□ -0.83
LINC00299-204ENST00000454043 IFT57Q9NWB7 429 aa9.85□□□□□ -0.83
LINC00299-204ENST00000454043 ALS2Q96Q42 1657 aa9.85□□□□□ -0.83
LINC00299-204ENST00000454043 PHRF1Q9P1Y6 1649 aaKnown RBP9.85□□□□□ -0.83
LINC00299-204ENST00000454043 PEAK1Q9H792 1746 aa9.85□□□□□ -0.83
LINC00299-204ENST00000454043 ABCC6O95255 1503 aa9.84□□□□□ -0.83
LINC00299-204ENST00000454043 PPFIA3O75145 1194 aa9.84□□□□□ -0.83
LINC00299-204ENST00000454043 CSB-PGBD3P0DP91 1061 aa9.84□□□□□ -0.83
LINC00299-204ENST00000454043 IRF7Q92985 503 aa9.84□□□□□ -0.83
LINC00299-204ENST00000454043 GDPD2Q9HCC8 539 aa9.84□□□□□ -0.83
LINC00299-204ENST00000454043 PRDM11Q9NQV5 511 aa9.84□□□□□ -0.83
LINC00299-204ENST00000454043 MARF1Q9Y4F3 1742 aaKnown RBP9.83□□□□□ -0.84
LINC00299-204ENST00000454043 GNAT3A8MTJ3 354 aa9.83□□□□□ -0.84
LINC00299-204ENST00000454043 RRP1P56182 461 aaKnown RBP9.83□□□□□ -0.84
LINC00299-204ENST00000454043 ERVK-9P63128 1117 aa9.83□□□□□ -0.84
LINC00299-204ENST00000454043 NBPF6Q5VWK0 638 aa9.83□□□□□ -0.84
LINC00299-204ENST00000454043 RAPGEF4Q8WZA2 1011 aa9.83□□□□□ -0.84
LINC00299-204ENST00000454043 NBPF4Q96M43 638 aa9.83□□□□□ -0.84
LINC00299-204ENST00000454043 PLEKHG2Q9H7P9 1386 aa9.83□□□□□ -0.84
LINC00299-204ENST00000454043 MED1Q15648 1581 aaPredicted RBP9.83□□□□□ -0.84
LINC00299-204ENST00000454043 ERBB4Q15303 1308 aa9.82□□□□□ -0.84
LINC00299-204ENST00000454043 EVA1CP58658 441 aa9.82□□□□□ -0.84
LINC00299-204ENST00000454043 MCM6Q14566 821 aa9.82□□□□□ -0.84
LINC00299-204ENST00000454043 MTHFSDQ2M296 383 aaKnown RBP9.82□□□□□ -0.84
LINC00299-204ENST00000454043 CC2D2BQ6DHV5 1058 aa9.82□□□□□ -0.84
LINC00299-204ENST00000454043 CHMP4AQ9BY43 222 aa9.82□□□□□ -0.84
LINC00299-204ENST00000454043 BABAM1Q9NWV8 329 aa9.82□□□□□ -0.84
LINC00299-204ENST00000454043 NLRP2Q9NX02 1062 aa9.82□□□□□ -0.84
LINC00299-204ENST00000454043 LAS1LQ9Y4W2 734 aaKnown RBP9.82□□□□□ -0.84
LINC00299-204ENST00000454043 KIAA0232Q92628 1395 aa9.82□□□□□ -0.84
LINC00299-204ENST00000454043 RGPD1P0DJD0 1748 aa9.82□□□□□ -0.84
LINC00299-204ENST00000454043 LTN1O94822 1766 aa9.81□□□□□ -0.84
LINC00299-204ENST00000454043 UBAP1LF5GYI3 381 aa9.81□□□□□ -0.84
LINC00299-204ENST00000454043 TATP17735 454 aaPredicted RBP9.81□□□□□ -0.84
LINC00299-204ENST00000454043 PTSQ03393 145 aa9.81□□□□□ -0.84
LINC00299-204ENST00000454043 C1orf141Q5JVX7 400 aa9.81□□□□□ -0.84
LINC00299-204ENST00000454043 PHTF2Q8N3S3 785 aa9.81□□□□□ -0.84
LINC00299-204ENST00000454043 PPP4R2Q9NY27 417 aa9.81□□□□□ -0.84
LINC00299-204ENST00000454043 SPG7Q9UQ90 795 aa9.81□□□□□ -0.84
LINC00299-204ENST00000454043 FANCIQ9NVI1 1328 aa9.81□□□□□ -0.84
LINC00299-204ENST00000454043 CANXP27824 592 aaKnown RBP9.8□□□□□ -0.84
LINC00299-204ENST00000454043 GMPRP36959 345 aa9.8□□□□□ -0.84
LINC00299-204ENST00000454043 AKAP4Q5JQC9 854 aa9.8□□□□□ -0.84
LINC00299-204ENST00000454043 POLMQ9NP87 494 aaPredicted RBP9.8□□□□□ -0.84
LINC00299-204ENST00000454043 PCDHB11Q9Y5F2 797 aa9.8□□□□□ -0.84
LINC00299-204ENST00000454043 NHSL1Q5SYE7 1610 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms