RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 FCGRTP55899 365 aa6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 KCNQ4P56696 695 aa6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 SFSWAPQ12872 951 aaKnown RBP6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 BMS1Q14692 1282 aaKnown RBP6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 GRIN2CQ14957 1233 aa6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 C6orf118Q5T5N4 469 aa6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 COL13A1Q5TAT6 717 aaPredicted RBP6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 PRPF40BQ6NWY9 871 aaKnown RBP6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 FBXL19Q6PCT2 694 aa6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 ZNF296Q8WUU4 475 aaPredicted RBP6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 PMEPA1Q969W9 287 aa6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 TMEM74Q96NL1 305 aa6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 CNTNAP3BQ96NU0 1288 aa6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 CNTNAP3Q9BZ76 1288 aa6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 GSX2Q9BZM3 304 aa6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 EHD4Q9H223 541 aa6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 RUBCNLQ9H714 662 aa6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 ZNF408Q9H9D4 720 aa6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 BRD7Q9NPI1 651 aa6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 GINM1Q9NU53 330 aa6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 ZFATQ9P243 1243 aa6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 TTF2Q9UNY4 1162 aaKnown RBP6.25□□□□□ -1.41
HMGN3P1-201ENST00000453847 TMEM238LA0A1B0GVL6 79 aa6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 FIGNL2A6NMB9 653 aa6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 GREM1O60565 184 aa6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 MMP20O60882 483 aa6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 FBXO24O75426 580 aa6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 BMP2P12643 396 aa6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 ACPPP15309 386 aa6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 EIF4A3P38919 411 aaKnown RBP6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 SAMD5Q5TGI4 173 aa6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 TTC39BQ5VTQ0 682 aaPredicted RBP6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 KIAA0825Q8IV33 1275 aa6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 OR13H1Q8NG92 308 aa6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 SPACA7Q96KW9 195 aa6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 RHOVQ96L33 236 aa6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 GPAMQ9HCL2 828 aa6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 EFR3BQ9Y2G0 817 aa6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 SOS2Q07890 1332 aaPredicted RBP6.24□□□□□ -1.41
HMGN3P1-201ENST00000453847 A0A0G2JS52 829 aa6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 KLF4O43474 513 aa6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 TRPA1O75762 1119 aa6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 SOX9P48436 509 aa6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 NASPP49321 788 aaPredicted RBP6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 PRR20EP86478 221 aa6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 PRR20CP86479 221 aa6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 PRR20DP86480 221 aa6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 PRR20BP86481 221 aa6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 PRR20AP86496 221 aa6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 UBAP2LQ14157 1087 aaKnown RBP6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 CCDC85BQ15834 202 aaPredicted RBP6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 MRPL14Q6P1L8 145 aaKnown RBP6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 RELL1Q8IUW5 271 aa6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 PHC3Q8NDX5 983 aa6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 GPATCH3Q96I76 525 aa6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 OXCT2Q9BYC2 517 aaPredicted RBP6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 STRN4Q9NRL3 753 aa6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 TLR6Q9Y2C9 796 aa6.23□□□□□ -1.41
HMGN3P1-201ENST00000453847 SENP3-EIF4A1A0A087X0R7 540 aa6.22□□□□□ -1.41
HMGN3P1-201ENST00000453847 TTLL8A6PVC2 850 aa6.22□□□□□ -1.41
HMGN3P1-201ENST00000453847 EFSO43281 561 aa6.22□□□□□ -1.41
HMGN3P1-201ENST00000453847 EPB42P16452 691 aa6.22□□□□□ -1.41
HMGN3P1-201ENST00000453847 GBP2P32456 591 aaPredicted RBP6.22□□□□□ -1.41
HMGN3P1-201ENST00000453847 MAP3K11Q16584 847 aa6.22□□□□□ -1.41
HMGN3P1-201ENST00000453847 KRT25Q7Z3Z0 450 aa6.22□□□□□ -1.41
HMGN3P1-201ENST00000453847 NLRP8Q86W28 1048 aa6.22□□□□□ -1.41
HMGN3P1-201ENST00000453847 CCNJLQ8IV13 435 aa6.22□□□□□ -1.41
HMGN3P1-201ENST00000453847 NT5C1AQ9BXI3 368 aa6.22□□□□□ -1.41
HMGN3P1-201ENST00000453847 TRAK1Q9UPV9 953 aa6.22□□□□□ -1.41
HMGN3P1-201ENST00000453847 KCNH4Q9UQ05 1017 aa6.22□□□□□ -1.41
HMGN3P1-201ENST00000453847 MRVI1Q9Y6F6 885 aa6.22□□□□□ -1.41
HMGN3P1-201ENST00000453847 MRPL42Q9Y6G3 142 aaKnown RBP6.22□□□□□ -1.41
HMGN3P1-201ENST00000453847 NFKBIEO00221 500 aa6.21□□□□□ -1.42
HMGN3P1-201ENST00000453847 PF4P02776 101 aa6.21□□□□□ -1.42
HMGN3P1-201ENST00000453847 F11P03951 625 aa6.21□□□□□ -1.42
HMGN3P1-201ENST00000453847 CELA3AP09093 270 aa6.21□□□□□ -1.42
HMGN3P1-201ENST00000453847 EDN3P14138 238 aa6.21□□□□□ -1.42
HMGN3P1-201ENST00000453847 GRIA4P48058 902 aa6.21□□□□□ -1.42
HMGN3P1-201ENST00000453847 FAM160A1Q05DH4 1040 aa6.21□□□□□ -1.42
HMGN3P1-201ENST00000453847 SV2BQ7L1I2 683 aa6.21□□□□□ -1.42
HMGN3P1-201ENST00000453847 HHIPQ96QV1 700 aa6.21□□□□□ -1.42
HMGN3P1-201ENST00000453847 ZKSCAN3Q9BRR0 538 aa6.21□□□□□ -1.42
HMGN3P1-201ENST00000453847 LIN7BQ9HAP6 207 aa6.21□□□□□ -1.42
HMGN3P1-201ENST00000453847 UBP1Q9NZI7 540 aa6.21□□□□□ -1.42
HMGN3P1-201ENST00000453847 AKAP2Q9Y2D5 859 aa6.21□□□□□ -1.42
HMGN3P1-201ENST00000453847 DYRK1BQ9Y463 629 aa6.21□□□□□ -1.42
HMGN3P1-201ENST00000453847 K7ELQ4 463 aaPredicted RBP6.2□□□□□ -1.42
HMGN3P1-201ENST00000453847 UPP2O95045 317 aa6.2□□□□□ -1.42
HMGN3P1-201ENST00000453847 KIF4AO95239 1232 aa6.2□□□□□ -1.42
HMGN3P1-201ENST00000453847 NCLP19338 710 aaKnown RBP6.2□□□□□ -1.42
HMGN3P1-201ENST00000453847 CRKP46108 304 aa6.2□□□□□ -1.42
HMGN3P1-201ENST00000453847 LIG3P49916 1009 aa6.2□□□□□ -1.42
HMGN3P1-201ENST00000453847 NFX1Q12986 1120 aaKnown RBP6.2□□□□□ -1.42
HMGN3P1-201ENST00000453847 CCINQ13939 588 aa6.2□□□□□ -1.42
HMGN3P1-201ENST00000453847 SPRED3Q2MJR0 410 aa6.2□□□□□ -1.42
HMGN3P1-201ENST00000453847 NBPF6Q5VWK0 638 aa6.2□□□□□ -1.42
HMGN3P1-201ENST00000453847 KANK3Q6NY19 840 aa6.2□□□□□ -1.42
HMGN3P1-201ENST00000453847 ANKS3Q6ZW76 656 aa6.2□□□□□ -1.42
HMGN3P1-201ENST00000453847 TRIM46Q7Z4K8 759 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms