RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ATG9AQ7Z3C6 839 aa19.29■□□□□ 0.68
SNX17-204ENST00000453453 PLEKHM2Q8IWE5 1019 aa19.29■□□□□ 0.68
SNX17-204ENST00000453453 C16orf71Q8IYS4 520 aaPredicted RBP19.29■□□□□ 0.68
SNX17-204ENST00000453453 GPATCH3Q96I76 525 aa19.29■□□□□ 0.68
SNX17-204ENST00000453453 CEP126Q9P2H0 1117 aa19.29■□□□□ 0.68
SNX17-204ENST00000453453 MX1P20591 662 aa19.29■□□□□ 0.68
SNX17-204ENST00000453453 PTMSP20962 102 aa19.29■□□□□ 0.68
SNX17-204ENST00000453453 C3orf67Q6ZVT6 689 aa19.29■□□□□ 0.68
SNX17-204ENST00000453453 AACSQ86V21 672 aa19.29■□□□□ 0.68
SNX17-204ENST00000453453 ANKRD18AQ8IVF6 992 aa19.29■□□□□ 0.68
SNX17-204ENST00000453453 SEC31BQ9NQW1 1179 aa19.29■□□□□ 0.68
SNX17-204ENST00000453453 RPGRQ92834 1020 aaKnown RBP19.28■□□□□ 0.68
SNX17-204ENST00000453453 PUS3Q9BZE2 481 aaKnown RBP19.28■□□□□ 0.68
SNX17-204ENST00000453453 GPR108Q9NPR9 543 aa19.28■□□□□ 0.68
SNX17-204ENST00000453453 DDX11L8A8MPP1 907 aa19.27■□□□□ 0.68
SNX17-204ENST00000453453 METTL24Q5JXM2 366 aa19.27■□□□□ 0.68
SNX17-204ENST00000453453 OTUD7AQ8TE49 926 aaPredicted RBP19.27■□□□□ 0.68
SNX17-204ENST00000453453 SLKQ9H2G2 1235 aaPredicted RBP19.27■□□□□ 0.68
SNX17-204ENST00000453453 AKAP2Q9Y2D5 859 aa19.27■□□□□ 0.68
SNX17-204ENST00000453453 AOX1Q06278 1338 aa19.27■□□□□ 0.68
SNX17-204ENST00000453453 MROH5Q6ZUA9 1318 aa19.27■□□□□ 0.68
SNX17-204ENST00000453453 CLCN1P35523 988 aa19.26■□□□□ 0.67
SNX17-204ENST00000453453 PDE1AP54750 535 aa19.26■□□□□ 0.67
SNX17-204ENST00000453453 TNNI3KQ59H18 835 aa19.26■□□□□ 0.67
SNX17-204ENST00000453453 FPGT-TNNI3KV9GXZ4 949 aa19.26■□□□□ 0.67
SNX17-204ENST00000453453 ANKRD31Q8N7Z5 1873 aa19.26■□□□□ 0.67
SNX17-204ENST00000453453 MRE11P49959 708 aa19.25■□□□□ 0.67
SNX17-204ENST00000453453 BRIP1Q9BX63 1249 aa19.25■□□□□ 0.67
SNX17-204ENST00000453453 OSBPL3Q9H4L5 887 aa19.25■□□□□ 0.67
SNX17-204ENST00000453453 STAP2Q9UGK3 403 aa19.25■□□□□ 0.67
SNX17-204ENST00000453453 RIPOR2Q9Y4F9 1068 aa19.25■□□□□ 0.67
SNX17-204ENST00000453453 EIF5BO60841 1220 aaKnown RBP19.25■□□□□ 0.67
SNX17-204ENST00000453453 PDE6BP35913 854 aa19.25■□□□□ 0.67
SNX17-204ENST00000453453 RBM17Q96I25 401 aaKnown RBP19.25■□□□□ 0.67
SNX17-204ENST00000453453 RRAGDQ9NQL2 400 aaPredicted RBP19.25■□□□□ 0.67
SNX17-204ENST00000453453 TTC41PQ6P2S7 1318 aa19.25■□□□□ 0.67
SNX17-204ENST00000453453 SALL3Q9BXA9 1300 aa19.25■□□□□ 0.67
SNX17-204ENST00000453453 TAF1P21675 1872 aa19.24■□□□□ 0.67
SNX17-204ENST00000453453 BMP2KLQ5H9B9 411 aa19.24■□□□□ 0.67
SNX17-204ENST00000453453 EAF2Q96CJ1 260 aaPredicted RBP19.24■□□□□ 0.67
SNX17-204ENST00000453453 CIZ1Q9ULV3 898 aaPredicted RBP19.24■□□□□ 0.67
SNX17-204ENST00000453453 ZNF609O15014 1411 aa19.24■□□□□ 0.67
SNX17-204ENST00000453453 ERC2O15083 957 aa19.23■□□□□ 0.67
SNX17-204ENST00000453453 RPS8P62241 208 aaKnown RBP19.23■□□□□ 0.67
SNX17-204ENST00000453453 CRY2Q49AN0 593 aa19.23■□□□□ 0.67
SNX17-204ENST00000453453 TTC22Q5TAA0 569 aa19.23■□□□□ 0.67
SNX17-204ENST00000453453 CCDC8Q9H0W5 538 aaPredicted RBP19.23■□□□□ 0.67
SNX17-204ENST00000453453 BSDC1Q9NW68 430 aaPredicted RBP19.23■□□□□ 0.67
SNX17-204ENST00000453453 NEUROD6Q96NK8 337 aa19.22■□□□□ 0.67
SNX17-204ENST00000453453 ECHDC1Q9NTX5 307 aa19.22■□□□□ 0.67
SNX17-204ENST00000453453 KLRG2A4D1S0 409 aaPredicted RBP19.22■□□□□ 0.67
SNX17-204ENST00000453453 XRCC6P12956 609 aaKnown RBP eCLIP19.22■□□□□ 0.67
SNX17-204ENST00000453453 GRAPQ13588 217 aa19.22■□□□□ 0.67
SNX17-204ENST00000453453 GRAPLQ8TC17 118 aaPredicted RBP19.22■□□□□ 0.67
SNX17-204ENST00000453453 CELF1Q92879 486 aaKnown RBP19.22■□□□□ 0.67
SNX17-204ENST00000453453 C22orf23Q9BZE7 217 aa19.22■□□□□ 0.67
SNX17-204ENST00000453453 PDGFDQ9GZP0 370 aaPredicted RBP19.22■□□□□ 0.67
SNX17-204ENST00000453453 A0A1B0GUL6 1792 aa19.21■□□□□ 0.67
SNX17-204ENST00000453453 PDE8BO95263 885 aa19.21■□□□□ 0.67
SNX17-204ENST00000453453 R3HDM1Q15032 1099 aaKnown RBP19.21■□□□□ 0.67
SNX17-204ENST00000453453 ATP2B3Q16720 1220 aa19.21■□□□□ 0.67
SNX17-204ENST00000453453 SNX21Q969T3 373 aa19.21■□□□□ 0.67
SNX17-204ENST00000453453 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.21■□□□□ 0.67
SNX17-204ENST00000453453 A0A1B0GUL7 405 aa19.2■□□□□ 0.66
SNX17-204ENST00000453453 GLRX3O76003 335 aaKnown RBP19.2■□□□□ 0.66
SNX17-204ENST00000453453 PUM3Q15397 648 aaKnown RBP19.2■□□□□ 0.66
SNX17-204ENST00000453453 AK9Q5TCS8 1911 aa19.2■□□□□ 0.66
SNX17-204ENST00000453453 HOXA10P31260 410 aaPredicted RBP19.19■□□□□ 0.66
SNX17-204ENST00000453453 GLIPR1L2Q4G1C9 344 aa19.19■□□□□ 0.66
SNX17-204ENST00000453453 GORABQ5T7V8 394 aa19.19■□□□□ 0.66
SNX17-204ENST00000453453 HSCBQ8IWL3 235 aa19.19■□□□□ 0.66
SNX17-204ENST00000453453 VGLL2Q8N8G2 317 aa19.19■□□□□ 0.66
SNX17-204ENST00000453453 CRAMP1Q96RY5 1269 aa19.19■□□□□ 0.66
SNX17-204ENST00000453453 MTFR1LQ9H019 292 aa19.19■□□□□ 0.66
SNX17-204ENST00000453453 ARAP2Q8WZ64 1704 aa19.19■□□□□ 0.66
SNX17-204ENST00000453453 COL4A1P02462 1669 aa19.19■□□□□ 0.66
SNX17-204ENST00000453453 NPR1P16066 1061 aa19.18■□□□□ 0.66
SNX17-204ENST00000453453 POLD1P28340 1107 aa19.18■□□□□ 0.66
SNX17-204ENST00000453453 CHRNDQ07001 517 aa19.18■□□□□ 0.66
SNX17-204ENST00000453453 TSHZ3Q63HK5 1081 aa19.18■□□□□ 0.66
SNX17-204ENST00000453453 ANKRD2Q9GZV1 360 aa19.18■□□□□ 0.66
SNX17-204ENST00000453453 TLR7Q9NYK1 1049 aaKnown RBP19.18■□□□□ 0.66
SNX17-204ENST00000453453 DBNLQ9UJU6 430 aaKnown RBP19.18■□□□□ 0.66
SNX17-204ENST00000453453 COL11A2P13942 1736 aaPredicted RBP19.18■□□□□ 0.66
SNX17-204ENST00000453453 TRAK2O60296 914 aa19.18■□□□□ 0.66
SNX17-204ENST00000453453 SLC5A1P13866 664 aa19.18■□□□□ 0.66
SNX17-204ENST00000453453 TIMM10P62072 90 aa19.18■□□□□ 0.66
SNX17-204ENST00000453453 TMC4Q7Z404 712 aa19.18■□□□□ 0.66
SNX17-204ENST00000453453 HELBQ8NG08 1087 aaPredicted RBP19.18■□□□□ 0.66
SNX17-204ENST00000453453 LPIN2Q92539 896 aa19.18■□□□□ 0.66
SNX17-204ENST00000453453 DBNDD2Q9BQY9 259 aa19.18■□□□□ 0.66
SNX17-204ENST00000453453 BBOX1O75936 387 aa19.17■□□□□ 0.66
SNX17-204ENST00000453453 ZBTB7AO95365 584 aa19.17■□□□□ 0.66
SNX17-204ENST00000453453 GSPT1P15170 499 aaKnown RBP19.17■□□□□ 0.66
SNX17-204ENST00000453453 RBM25P49756 843 aaKnown RBP19.17■□□□□ 0.66
SNX17-204ENST00000453453 PI4K2BQ8TCG2 481 aa19.17■□□□□ 0.66
SNX17-204ENST00000453453 MINPP1Q9UNW1 487 aa19.17■□□□□ 0.66
SNX17-204ENST00000453453 H0YIN7 160 aa19.16■□□□□ 0.66
SNX17-204ENST00000453453 IFIT1P09914 478 aaKnown RBP19.16■□□□□ 0.66
SNX17-204ENST00000453453 SRGNP10124 158 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms