RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 LARGE2Q8N3Y3 721 aa19.73■□□□□ 0.75
VCX3B-204ENST00000453306 SNED1Q8TER0 1413 aa19.73■□□□□ 0.75
VCX3B-204ENST00000453306 CDHR2Q9BYE9 1310 aa19.73■□□□□ 0.75
VCX3B-204ENST00000453306 ANKRD36CQ5JPF3 1778 aa19.72■□□□□ 0.75
VCX3B-204ENST00000453306 MVPQ14764 893 aaKnown RBP19.72■□□□□ 0.75
VCX3B-204ENST00000453306 ITPRIPQ8IWB1 547 aa19.72■□□□□ 0.75
VCX3B-204ENST00000453306 CNTROBQ8N137 903 aa19.72■□□□□ 0.75
VCX3B-204ENST00000453306 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.72■□□□□ 0.75
VCX3B-204ENST00000453306 VPS33BQ9H267 617 aa19.72■□□□□ 0.75
VCX3B-204ENST00000453306 C9orf78Q9NZ63 289 aaPredicted RBP19.72■□□□□ 0.75
VCX3B-204ENST00000453306 GJA3Q9Y6H8 435 aa19.72■□□□□ 0.75
VCX3B-204ENST00000453306 NIM1KQ8IY84 436 aa19.71■□□□□ 0.75
VCX3B-204ENST00000453306 PLA2G12BQ9BX93 195 aa19.71■□□□□ 0.75
VCX3B-204ENST00000453306 ANKRD44Q8N8A2 993 aa19.7■□□□□ 0.74
VCX3B-204ENST00000453306 SUPT20HQ8NEM7 779 aa19.7■□□□□ 0.74
VCX3B-204ENST00000453306 AIDAQ96BJ3 306 aa19.7■□□□□ 0.74
VCX3B-204ENST00000453306 CRBNQ96SW2 442 aa19.7■□□□□ 0.74
VCX3B-204ENST00000453306 IRX6P78412 446 aaPredicted RBP19.69■□□□□ 0.74
VCX3B-204ENST00000453306 MAP1SQ66K74 1059 aaPredicted RBP19.69■□□□□ 0.74
VCX3B-204ENST00000453306 SLC51AQ86UW1 340 aa19.69■□□□□ 0.74
VCX3B-204ENST00000453306 TTLL11Q8NHH1 800 aa19.69■□□□□ 0.74
VCX3B-204ENST00000453306 ATP6V0A2Q9Y487 856 aa19.69■□□□□ 0.74
VCX3B-204ENST00000453306 PPIP5K2O43314 1243 aa19.68■□□□□ 0.74
VCX3B-204ENST00000453306 PDE8AO60658 829 aa19.68■□□□□ 0.74
VCX3B-204ENST00000453306 CSF1RP07333 972 aa19.68■□□□□ 0.74
VCX3B-204ENST00000453306 MS4A1P11836 297 aa19.68■□□□□ 0.74
VCX3B-204ENST00000453306 SF3B3Q15393 1217 aaKnown RBP19.68■□□□□ 0.74
VCX3B-204ENST00000453306 CCDC85AQ96PX6 553 aaPredicted RBP19.68■□□□□ 0.74
VCX3B-204ENST00000453306 ZBTB40Q9NUA8 1239 aa19.68■□□□□ 0.74
VCX3B-204ENST00000453306 ADAMTSL1Q8N6G6 1762 aa19.67■□□□□ 0.74
VCX3B-204ENST00000453306 BBOX1O75936 387 aa19.67■□□□□ 0.74
VCX3B-204ENST00000453306 CENPBP07199 599 aaPredicted RBP19.67■□□□□ 0.74
VCX3B-204ENST00000453306 VEGFBP49765 207 aa19.67■□□□□ 0.74
VCX3B-204ENST00000453306 USP50Q70EL3 339 aaPredicted RBP19.67■□□□□ 0.74
VCX3B-204ENST00000453306 BICC1Q9H694 974 aaKnown RBP19.67■□□□□ 0.74
VCX3B-204ENST00000453306 C1orf115Q9H7X2 142 aa19.67■□□□□ 0.74
VCX3B-204ENST00000453306 LRRFIP2Q9Y608 721 aaKnown RBP19.67■□□□□ 0.74
VCX3B-204ENST00000453306 COL4A1P02462 1669 aa19.66■□□□□ 0.74
VCX3B-204ENST00000453306 UBTFL1P0CB47 393 aaPredicted RBP19.66■□□□□ 0.74
VCX3B-204ENST00000453306 CTSWP56202 376 aa19.66■□□□□ 0.74
VCX3B-204ENST00000453306 DEFB115Q30KQ5 88 aa19.66■□□□□ 0.74
VCX3B-204ENST00000453306 SEC31BQ9NQW1 1179 aa19.66■□□□□ 0.74
VCX3B-204ENST00000453306 RASSF10A6NK89 507 aa19.65■□□□□ 0.74
VCX3B-204ENST00000453306 CTCFP49711 727 aaPredicted RBP19.65■□□□□ 0.74
VCX3B-204ENST00000453306 SCNN1DP51172 638 aa19.65■□□□□ 0.74
VCX3B-204ENST00000453306 RABL6Q3YEC7 729 aaPredicted RBP19.65■□□□□ 0.74
VCX3B-204ENST00000453306 LMBR1LQ6UX01 489 aa19.65■□□□□ 0.74
VCX3B-204ENST00000453306 DPP8Q6V1X1 898 aaPredicted RBP19.65■□□□□ 0.74
VCX3B-204ENST00000453306 DDX46Q7L014 1031 aaKnown RBP19.65■□□□□ 0.74
VCX3B-204ENST00000453306 EXOC6Q8TAG9 804 aa19.65■□□□□ 0.74
VCX3B-204ENST00000453306 GREM2Q9H772 168 aa19.65■□□□□ 0.74
VCX3B-204ENST00000453306 ABT1Q9ULW3 272 aaKnown RBP19.65■□□□□ 0.74
VCX3B-204ENST00000453306 FOXN1O15353 648 aa19.64■□□□□ 0.73
VCX3B-204ENST00000453306 GNAI3P08754 354 aa19.64■□□□□ 0.73
VCX3B-204ENST00000453306 AOC3Q16853 763 aa19.64■□□□□ 0.73
VCX3B-204ENST00000453306 SP8Q8IXZ3 490 aa19.64■□□□□ 0.73
VCX3B-204ENST00000453306 RTFDC1Q9BY42 306 aaPredicted RBP19.64■□□□□ 0.73
VCX3B-204ENST00000453306 PRDM10Q9NQV6 1147 aa19.64■□□□□ 0.73
VCX3B-204ENST00000453306 ZNRF3Q9ULT6 936 aa19.64■□□□□ 0.73
VCX3B-204ENST00000453306 DDX19BQ9UMR2 479 aa19.64■□□□□ 0.73
VCX3B-204ENST00000453306 DDX60Q8IY21 1712 aaKnown RBP19.63■□□□□ 0.73
VCX3B-204ENST00000453306 COL4A5P29400 1685 aa19.63■□□□□ 0.73
VCX3B-204ENST00000453306 EPS15P42566 896 aa19.63■□□□□ 0.73
VCX3B-204ENST00000453306 FAM161AQ3B820 660 aa19.63■□□□□ 0.73
VCX3B-204ENST00000453306 TMC4Q7Z404 712 aa19.63■□□□□ 0.73
VCX3B-204ENST00000453306 MPNDQ8N594 471 aa19.63■□□□□ 0.73
VCX3B-204ENST00000453306 GNAI2P04899 355 aa19.62■□□□□ 0.73
VCX3B-204ENST00000453306 CELF1Q92879 486 aaKnown RBP19.62■□□□□ 0.73
VCX3B-204ENST00000453306 ADARB2Q9NS39 739 aaKnown RBP19.62■□□□□ 0.73
VCX3B-204ENST00000453306 RFX5P48382 616 aaPredicted RBP19.61■□□□□ 0.73
VCX3B-204ENST00000453306 MAP2K1Q02750 393 aaPredicted RBP19.61■□□□□ 0.73
VCX3B-204ENST00000453306 GRAPQ13588 217 aa19.61■□□□□ 0.73
VCX3B-204ENST00000453306 SIRT2Q8IXJ6 389 aa19.61■□□□□ 0.73
VCX3B-204ENST00000453306 GRAPLQ8TC17 118 aaPredicted RBP19.61■□□□□ 0.73
VCX3B-204ENST00000453306 WBP1LQ9NX94 342 aa19.61■□□□□ 0.73
VCX3B-204ENST00000453306 WDR33Q9C0J8 1336 aaKnown RBP19.6■□□□□ 0.73
VCX3B-204ENST00000453306 PNMA6EA0A0J9YXQ4 647 aa19.6■□□□□ 0.73
VCX3B-204ENST00000453306 TNIP1Q15025 636 aa19.6■□□□□ 0.73
VCX3B-204ENST00000453306 GPRC5DQ9NZD1 345 aa19.6■□□□□ 0.73
VCX3B-204ENST00000453306 PCDHB15Q9Y5E8 787 aa19.6■□□□□ 0.73
VCX3B-204ENST00000453306 ECE1P42892 770 aa19.59■□□□□ 0.73
VCX3B-204ENST00000453306 CXCL9Q07325 125 aa19.59■□□□□ 0.73
VCX3B-204ENST00000453306 KIAA2012Q0VF49 1180 aa19.59■□□□□ 0.73
VCX3B-204ENST00000453306 MTX1Q13505 466 aa19.59■□□□□ 0.73
VCX3B-204ENST00000453306 CIAPIN1Q6FI81 312 aa19.59■□□□□ 0.73
VCX3B-204ENST00000453306 ZNF594Q96JF6 807 aaPredicted RBP19.59■□□□□ 0.73
VCX3B-204ENST00000453306 RTL9Q8NET4 1388 aa19.58■□□□□ 0.73
VCX3B-204ENST00000453306 ITGA6P23229 1130 aa19.58■□□□□ 0.72
VCX3B-204ENST00000453306 CCDC152Q4G0S7 254 aa19.58■□□□□ 0.72
VCX3B-204ENST00000453306 CEP85Q6P2H3 762 aa19.58■□□□□ 0.72
VCX3B-204ENST00000453306 KLHDC4Q8TBB5 520 aa19.58■□□□□ 0.72
VCX3B-204ENST00000453306 LTBP1Q14766 1721 aa19.58■□□□□ 0.72
VCX3B-204ENST00000453306 HSP90B1P14625 803 aaKnown RBP19.57■□□□□ 0.72
VCX3B-204ENST00000453306 ATP8B2P98198 1209 aa19.57■□□□□ 0.72
VCX3B-204ENST00000453306 PAXIP1Q6ZW49 1069 aaPredicted RBP19.57■□□□□ 0.72
VCX3B-204ENST00000453306 GMPSP49915 693 aaPredicted RBP19.56■□□□□ 0.72
VCX3B-204ENST00000453306 BEGAINQ9BUH8 593 aa19.56■□□□□ 0.72
VCX3B-204ENST00000453306 PUS3Q9BZE2 481 aaKnown RBP19.56■□□□□ 0.72
VCX3B-204ENST00000453306 CHMP3Q9Y3E7 222 aa19.56■□□□□ 0.72
VCX3B-204ENST00000453306 RPS8P62241 208 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 206.1 ms