RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 TTC6Q86TZ1 520 aa9.69□□□□□ -0.86
SMCO1-202ENST00000452776 ITFG2Q969R8 447 aa9.69□□□□□ -0.86
SMCO1-202ENST00000452776 CD109Q6YHK3 1445 aa9.69□□□□□ -0.86
SMCO1-202ENST00000452776 MAST1Q9Y2H9 1570 aa9.69□□□□□ -0.86
SMCO1-202ENST00000452776 MSH6P52701 1360 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 PES1O00541 588 aaKnown RBP9.68□□□□□ -0.86
SMCO1-202ENST00000452776 HMGB1P09429 215 aaKnown RBP9.68□□□□□ -0.86
SMCO1-202ENST00000452776 ICA1Q05084 483 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 ANKRD1Q15327 319 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 KIF4BQ2VIQ3 1234 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 GORABQ5T7V8 394 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 NOL8Q76FK4 1167 aaKnown RBP9.68□□□□□ -0.86
SMCO1-202ENST00000452776 PALD1Q9ULE6 856 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 CCDC9Q9Y3X0 531 aaKnown RBP9.68□□□□□ -0.86
SMCO1-202ENST00000452776 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.68□□□□□ -0.86
SMCO1-202ENST00000452776 USP16Q9Y5T5 823 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 PARP3Q9Y6F1 533 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 DISP1Q96F81 1524 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 INPP5BP32019 993 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 MRPL12P52815 198 aaKnown RBP9.68□□□□□ -0.86
SMCO1-202ENST00000452776 AK2P54819 239 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 BEND6Q5SZJ8 279 aaPredicted RBP9.68□□□□□ -0.86
SMCO1-202ENST00000452776 TRIM65Q6PJ69 517 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 MICALCLQ6ZW33 695 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMCO1-202ENST00000452776 AMOTL1Q8IY63 956 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 PRPF38AQ8NAV1 312 aaKnown RBP9.68□□□□□ -0.86
SMCO1-202ENST00000452776 AFAP1L1Q8TED9 768 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 SH3GL3Q99963 347 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 THUMPD2Q9BTF0 503 aaKnown RBP9.68□□□□□ -0.86
SMCO1-202ENST00000452776 UPF3BQ9BZI7 483 aaKnown RBP9.68□□□□□ -0.86
SMCO1-202ENST00000452776 PDE11AQ9HCR9 933 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 L1RE1Q9UN81 338 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 SSUH2Q9Y2M2 353 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 MRFAP1Q9Y605 127 aa9.68□□□□□ -0.86
SMCO1-202ENST00000452776 KIAA0556O60303 1618 aa9.67□□□□□ -0.86
SMCO1-202ENST00000452776 SHTN1A0MZ66 631 aa9.67□□□□□ -0.86
SMCO1-202ENST00000452776 VPS37CA5D8V6 355 aaPredicted RBP9.67□□□□□ -0.86
SMCO1-202ENST00000452776 H3BQF6 201 aa9.67□□□□□ -0.86
SMCO1-202ENST00000452776 ARHGAP25P42331 645 aa9.67□□□□□ -0.86
SMCO1-202ENST00000452776 CNNM3Q8NE01 707 aa9.67□□□□□ -0.86
SMCO1-202ENST00000452776 LEO1Q8WVC0 666 aaPredicted RBP9.67□□□□□ -0.86
SMCO1-202ENST00000452776 TRIM6Q9C030 488 aaPredicted RBP9.67□□□□□ -0.86
SMCO1-202ENST00000452776 SH3BP1Q9Y3L3 701 aa9.67□□□□□ -0.86
SMCO1-202ENST00000452776 ARHGAP6O43182 974 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 IPO7O95373 1038 aaKnown RBP9.66□□□□□ -0.86
SMCO1-202ENST00000452776 GPTP24298 496 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 AARSP49588 968 aaKnown RBP eCLIP9.66□□□□□ -0.86
SMCO1-202ENST00000452776 HNRNPMP52272 730 aaKnown RBP eCLIP9.66□□□□□ -0.86
SMCO1-202ENST00000452776 BIRC2Q13490 618 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 ARID5BQ14865 1188 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 PREPLQ4J6C6 727 aaPredicted RBP9.66□□□□□ -0.86
SMCO1-202ENST00000452776 SRGAP1Q7Z6B7 1085 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 KIAA1328Q86T90 577 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 MSANTD4Q8NCY6 345 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 ARMC2Q8NEN0 867 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 MAGEC3Q8TD91 643 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 PRAM1Q96QH2 718 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 BATF3Q9NR55 127 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 MCM8Q9UJA3 840 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 SPHKAPQ2M3C7 1700 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 GNAI3P08754 354 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 TRAF1Q13077 416 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 PLCB4Q15147 1175 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 TWISTNBQ3B726 338 aaPredicted RBP9.66□□□□□ -0.86
SMCO1-202ENST00000452776 AP1ARQ63HQ0 302 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 RUFY3Q7L099 469 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 TCP11Q8WWU5 503 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 RUFY2Q8WXA3 655 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 LRRCC1Q9C099 1032 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 TMX4Q9H1E5 349 aaPredicted RBP9.66□□□□□ -0.86
SMCO1-202ENST00000452776 ALDH8A1Q9H2A2 487 aaPredicted RBP9.66□□□□□ -0.86
SMCO1-202ENST00000452776 SPATS2LQ9NUQ6 558 aaKnown RBP9.66□□□□□ -0.86
SMCO1-202ENST00000452776 HYPKQ9NX55 129 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 AKAP2Q9Y2D5 859 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 FAN1Q9Y2M0 1017 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 SNX14Q9Y5W7 946 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 CYP46A1Q9Y6A2 500 aa9.66□□□□□ -0.86
SMCO1-202ENST00000452776 MYO3AQ8NEV4 1616 aa9.65□□□□□ -0.86
SMCO1-202ENST00000452776 DIAPH1O60610 1272 aaKnown RBP9.65□□□□□ -0.86
SMCO1-202ENST00000452776 SHOX2O60902 331 aaPredicted RBP9.65□□□□□ -0.86
SMCO1-202ENST00000452776 NEBLO76041 1014 aa9.65□□□□□ -0.86
SMCO1-202ENST00000452776 KIAA0754O94854 1291 aa9.65□□□□□ -0.86
SMCO1-202ENST00000452776 PSMA5P28066 241 aa9.65□□□□□ -0.86
SMCO1-202ENST00000452776 ADCY2Q08462 1091 aa9.65□□□□□ -0.86
SMCO1-202ENST00000452776 MCM6Q14566 821 aa9.65□□□□□ -0.86
SMCO1-202ENST00000452776 WLSQ5T9L3 541 aa9.65□□□□□ -0.86
SMCO1-202ENST00000452776 CCDC73Q6ZRK6 1079 aa9.65□□□□□ -0.86
SMCO1-202ENST00000452776 DHX40Q8IX18 779 aaKnown RBP9.65□□□□□ -0.86
SMCO1-202ENST00000452776 LRRN4CLQ8ND94 238 aa9.65□□□□□ -0.86
SMCO1-202ENST00000452776 OTUD7AQ8TE49 926 aaPredicted RBP9.65□□□□□ -0.86
SMCO1-202ENST00000452776 CCDC102AQ96A19 550 aa9.65□□□□□ -0.86
SMCO1-202ENST00000452776 PSMD1Q99460 953 aa9.65□□□□□ -0.86
SMCO1-202ENST00000452776 TEX13AQ9BXU3 409 aaPredicted RBP9.65□□□□□ -0.86
SMCO1-202ENST00000452776 FAM169AQ9Y6X4 670 aa9.65□□□□□ -0.86
SMCO1-202ENST00000452776 KIAA0232Q92628 1395 aa9.65□□□□□ -0.87
SMCO1-202ENST00000452776 EXOC5O00471 708 aa9.64□□□□□ -0.87
SMCO1-202ENST00000452776 MPHOSPH10O00566 681 aaKnown RBP9.64□□□□□ -0.87
SMCO1-202ENST00000452776 KINO60870 393 aaKnown RBP9.64□□□□□ -0.87
SMCO1-202ENST00000452776 NR1I2O75469 434 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms