RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 C2orf49Q9BVC5 232 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 ZCCHC2Q9C0B9 1178 aaKnown RBP5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 PHACTR1Q9C0D0 580 aa5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 METTL5Q9NRN9 209 aaKnown RBP5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 DDX56Q9NY93 547 aaKnown RBP5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 PRR12Q9ULL5 1215 aa5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 ATAD2Q6PL18 1390 aa5.82□□□□□ -1.48
HMGB3P21-201ENST00000452483 STK10O94804 968 aaKnown RBP5.82□□□□□ -1.48
HMGB3P21-201ENST00000452483 FAM157BP0CG42 384 aa5.82□□□□□ -1.48
HMGB3P21-201ENST00000452483 IGFBP4P22692 258 aa5.82□□□□□ -1.48
HMGB3P21-201ENST00000452483 MAP2K3P46734 347 aa5.82□□□□□ -1.48
HMGB3P21-201ENST00000452483 TBX4P57082 545 aa5.82□□□□□ -1.48
HMGB3P21-201ENST00000452483 NFE2L2Q16236 605 aa5.82□□□□□ -1.48
HMGB3P21-201ENST00000452483 SAMD5Q5TGI4 173 aa5.82□□□□□ -1.48
HMGB3P21-201ENST00000452483 C1orf53Q5VUE5 145 aa5.82□□□□□ -1.48
HMGB3P21-201ENST00000452483 RGL4Q8IZJ4 473 aa5.82□□□□□ -1.48
HMGB3P21-201ENST00000452483 KLRG1Q96E93 195 aa5.82□□□□□ -1.48
HMGB3P21-201ENST00000452483 SPC25Q9HBM1 224 aa5.82□□□□□ -1.48
HMGB3P21-201ENST00000452483 PPP1R12AO14974 1030 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 KHNYNO15037 678 aaKnown RBP5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 PRC1O43663 620 aa5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 WDHD1O75717 1129 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 P4HBP07237 508 aaKnown RBP5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 CELA2BP08218 269 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 MCCP23508 829 aa5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 ZNF76P36508 570 aa5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 FANCCQ00597 558 aa5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 MAP3K10Q02779 954 aa5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 SWI5Q1ZZU3 235 aa5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 C4orf46Q504U0 113 aa5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 LYPD4Q6UWN0 246 aa5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 LRRC69Q6ZNQ3 347 aa5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 ALDH16A1Q8IZ83 802 aa5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 JDP2Q8WYK2 163 aa5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 HSH2DQ96JZ2 352 aa5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 RPS6KC1Q96S38 1066 aa5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 MAF1Q9H063 256 aa5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 INPP5FQ9Y2H2 1132 aa5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 HCN4Q9Y3Q4 1203 aa5.81□□□□□ -1.48
HMGB3P21-201ENST00000452483 FOXO3O43524 673 aa5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 MAPTP10636 758 aaKnown RBP5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 BMP4P12644 408 aa5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 CD33P20138 364 aa5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 WEE1P30291 646 aa5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 TNP2Q05952 138 aa5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 PDE3BQ13370 1112 aa5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 OS9Q13438 667 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 WDR78Q5VTH9 848 aa5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 KRBA2Q6ZNG9 492 aa5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 RPUSD2Q8IZ73 545 aaKnown RBP5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 PRPF38AQ8NAV1 312 aaKnown RBP5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 PNISRQ8TF01 805 aaKnown RBP5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 C7orf43Q8WVR3 580 aa5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 ACDQ96AP0 544 aa5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 NGLY1Q96IV0 654 aa5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 FAM161BQ96MY7 647 aa5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 OXCT2Q9BYC2 517 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 VTI1BQ9UEU0 232 aa5.8□□□□□ -1.48
HMGB3P21-201ENST00000452483 C2CD2LO14523 706 aa5.79□□□□□ -1.48
HMGB3P21-201ENST00000452483 EFSO43281 561 aa5.79□□□□□ -1.48
HMGB3P21-201ENST00000452483 ARHGEF15O94989 841 aa5.79□□□□□ -1.48
HMGB3P21-201ENST00000452483 XRCC5P13010 732 aaKnown RBP5.79□□□□□ -1.48
HMGB3P21-201ENST00000452483 CTBSQ01459 385 aa5.79□□□□□ -1.48
HMGB3P21-201ENST00000452483 C11orf96Q7Z7L8 435 aa5.79□□□□□ -1.48
HMGB3P21-201ENST00000452483 NEUROD4Q9HD90 331 aa5.79□□□□□ -1.48
HMGB3P21-201ENST00000452483 HCN2Q9UL51 889 aa5.79□□□□□ -1.48
HMGB3P21-201ENST00000452483 WWC3Q9ULE0 1092 aa5.79□□□□□ -1.48
HMGB3P21-201ENST00000452483 SORBS3O60504 671 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 PRMT3O60678 531 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 BCRP11274 1271 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 LAMC2Q13753 1193 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 ENOX2Q16206 610 aaKnown RBP5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 HIF1AQ16665 826 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 RTN1Q16799 776 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 FAM182BQ5T319 152 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 CLEC4GQ6UXB4 293 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 SLCO4C1Q6ZQN7 724 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 VPS37DQ86XT2 251 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 SUSD3Q96L08 255 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 MTA3Q9BTC8 594 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 KRTAP4-8Q9BYQ9 185 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 STRN4Q9NRL3 753 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 GNL3LQ9NVN8 582 aaKnown RBP5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 PARP2Q9UGN5 583 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 TCEAL9Q9UHQ7 104 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 GDF2Q9UK05 429 aaPredicted RBP5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 ADAMTS8Q9UP79 889 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 COMMD10Q9Y6G5 202 aa5.78□□□□□ -1.48
HMGB3P21-201ENST00000452483 KIF4AO95239 1232 aa5.77□□□□□ -1.49
HMGB3P21-201ENST00000452483 TYRO3Q06418 890 aa5.77□□□□□ -1.49
HMGB3P21-201ENST00000452483 FKBP5Q13451 457 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P21-201ENST00000452483 GOLGA6L1Q8N7Z2 621 aa5.77□□□□□ -1.49
HMGB3P21-201ENST00000452483 ZNF280CQ8ND82 737 aa5.77□□□□□ -1.49
HMGB3P21-201ENST00000452483 STAG1Q8WVM7 1258 aa5.77□□□□□ -1.49
HMGB3P21-201ENST00000452483 SLKQ9H2G2 1235 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P21-201ENST00000452483 ENAMQ9NRM1 1142 aa5.77□□□□□ -1.49
HMGB3P21-201ENST00000452483 LRRC4BQ9NT99 713 aa5.77□□□□□ -1.49
HMGB3P21-201ENST00000452483 BSDC1Q9NW68 430 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P21-201ENST00000452483 GEMIN8Q9NWZ8 242 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms