RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 ZNF500O60304 480 aaPredicted RBP18.29■□□□□ 0.52
CCHCR1-208ENST00000451521 CASTP20810 708 aaKnown RBP18.29■□□□□ 0.52
CCHCR1-208ENST00000451521 ADCK5Q3MIX3 580 aa18.29■□□□□ 0.52
CCHCR1-208ENST00000451521 KBTBD3Q8NAB2 608 aa18.29■□□□□ 0.52
CCHCR1-208ENST00000451521 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.29■□□□□ 0.52
CCHCR1-208ENST00000451521 NEUROD6Q96NK8 337 aa18.29■□□□□ 0.52
CCHCR1-208ENST00000451521 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.29■□□□□ 0.52
CCHCR1-208ENST00000451521 RPAP1Q9BWH6 1393 aaPredicted RBP18.29■□□□□ 0.52
CCHCR1-208ENST00000451521 TAF5LO75529 589 aa18.29■□□□□ 0.52
CCHCR1-208ENST00000451521 ZKSCAN1P17029 563 aaPredicted RBP18.29■□□□□ 0.52
CCHCR1-208ENST00000451521 VPS53Q5VIR6 699 aa18.29■□□□□ 0.52
CCHCR1-208ENST00000451521 NOL8Q76FK4 1167 aaKnown RBP18.29■□□□□ 0.52
CCHCR1-208ENST00000451521 ZNF589Q86UQ0 364 aaPredicted RBP18.29■□□□□ 0.52
CCHCR1-208ENST00000451521 A0A1B0GUL7 405 aa18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 SLC27A2O14975 620 aa18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 EIF5P55010 431 aaKnown RBP18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 ZSCAN23Q3MJ62 389 aa18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 MEX3CQ5U5Q3 659 aaKnown RBP18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 USPL1Q5W0Q7 1092 aa18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 RUFY3Q7L099 469 aa18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 DZIP3Q86Y13 1208 aaKnown RBP18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 PDLIM2Q96JY6 352 aa18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 DNAJC2Q99543 621 aaKnown RBP18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 CEP126Q9P2H0 1117 aa18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 ZHX1Q9UKY1 873 aaPredicted RBP18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 LIMCH1Q9UPQ0 1083 aa18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 TSGA10IPQ3SY00 556 aa18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 INTS5Q6P9B9 1019 aaKnown RBP18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 ZNF34Q8IZ26 560 aa18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 JAKMIP1Q96N16 626 aaKnown RBP18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 NDUFB9Q9Y6M9 179 aa18.28■□□□□ 0.52
CCHCR1-208ENST00000451521 BRD1O95696 1058 aa18.27■□□□□ 0.52
CCHCR1-208ENST00000451521 GPTP24298 496 aa18.27■□□□□ 0.52
CCHCR1-208ENST00000451521 IFIT5Q13325 482 aaKnown RBP18.27■□□□□ 0.52
CCHCR1-208ENST00000451521 CAVIN1Q6NZI2 390 aaKnown RBP18.27■□□□□ 0.52
CCHCR1-208ENST00000451521 TTLL11Q8NHH1 800 aa18.27■□□□□ 0.52
CCHCR1-208ENST00000451521 RBSNQ9H1K0 784 aa18.27■□□□□ 0.52
CCHCR1-208ENST00000451521 CYP46A1Q9Y6A2 500 aa18.27■□□□□ 0.52
CCHCR1-208ENST00000451521 MCTP1Q6DN14 999 aa18.27■□□□□ 0.51
CCHCR1-208ENST00000451521 SYNE4Q8N205 404 aa18.27■□□□□ 0.51
CCHCR1-208ENST00000451521 CCDC85AQ96PX6 553 aaPredicted RBP18.27■□□□□ 0.51
CCHCR1-208ENST00000451521 AKAP2Q9Y2D5 859 aa18.27■□□□□ 0.51
CCHCR1-208ENST00000451521 SH3TC1Q8TE82 1336 aa18.26■□□□□ 0.51
CCHCR1-208ENST00000451521 UQCRHLA0A096LP55 91 aa18.26■□□□□ 0.51
CCHCR1-208ENST00000451521 UQCRHP07919 91 aa18.26■□□□□ 0.51
CCHCR1-208ENST00000451521 RNF20Q5VTR2 975 aa18.26■□□□□ 0.51
CCHCR1-208ENST00000451521 CCDC87Q9NVE4 849 aa18.26■□□□□ 0.51
CCHCR1-208ENST00000451521 PAG1Q9NWQ8 432 aa18.26■□□□□ 0.51
CCHCR1-208ENST00000451521 HMG20BQ9P0W2 317 aa18.26■□□□□ 0.51
CCHCR1-208ENST00000451521 ZNF831Q5JPB2 1677 aa18.26■□□□□ 0.51
CCHCR1-208ENST00000451521 KCNJ4P48050 445 aa18.26■□□□□ 0.51
CCHCR1-208ENST00000451521 CTSWP56202 376 aa18.26■□□□□ 0.51
CCHCR1-208ENST00000451521 DDX46Q7L014 1031 aaKnown RBP18.26■□□□□ 0.51
CCHCR1-208ENST00000451521 PDRG1Q9NUG6 133 aa18.26■□□□□ 0.51
CCHCR1-208ENST00000451521 CPA1P15085 419 aa18.25■□□□□ 0.51
CCHCR1-208ENST00000451521 MCMDC2Q4G0Z9 681 aa18.25■□□□□ 0.51
CCHCR1-208ENST00000451521 TBC1D2BQ9UPU7 963 aa18.25■□□□□ 0.51
CCHCR1-208ENST00000451521 UBN2Q6ZU65 1347 aa18.25■□□□□ 0.51
CCHCR1-208ENST00000451521 LOC102724428A0A0B4J2F2 783 aa18.25■□□□□ 0.51
CCHCR1-208ENST00000451521 NCLP19338 710 aaKnown RBP18.25■□□□□ 0.51
CCHCR1-208ENST00000451521 PSMA5P28066 241 aa18.25■□□□□ 0.51
CCHCR1-208ENST00000451521 SIK1P57059 783 aa18.25■□□□□ 0.51
CCHCR1-208ENST00000451521 PRDM10Q9NQV6 1147 aa18.25■□□□□ 0.51
CCHCR1-208ENST00000451521 LMBRD1Q9NUN5 540 aa18.25■□□□□ 0.51
CCHCR1-208ENST00000451521 RIC1Q4ADV7 1423 aa18.24■□□□□ 0.51
CCHCR1-208ENST00000451521 IRS4O14654 1257 aaPredicted RBP18.24■□□□□ 0.51
CCHCR1-208ENST00000451521 ATP6V1AP38606 617 aa18.24■□□□□ 0.51
CCHCR1-208ENST00000451521 ALDH8A1Q9H2A2 487 aaPredicted RBP18.24■□□□□ 0.51
CCHCR1-208ENST00000451521 TRMT112Q9UI30 125 aaKnown RBP18.24■□□□□ 0.51
CCHCR1-208ENST00000451521 RIPOR2Q9Y4F9 1068 aa18.24■□□□□ 0.51
CCHCR1-208ENST00000451521 MYH14Q7Z406 1995 aaKnown RBP18.24■□□□□ 0.51
CCHCR1-208ENST00000451521 COL5A3P25940 1745 aaPredicted RBP18.24■□□□□ 0.51
CCHCR1-208ENST00000451521 PDE8AO60658 829 aa18.24■□□□□ 0.51
CCHCR1-208ENST00000451521 CRKLP46109 303 aaKnown RBP18.24■□□□□ 0.51
CCHCR1-208ENST00000451521 ZSCAN31Q96LW9 406 aaPredicted RBP18.24■□□□□ 0.51
CCHCR1-208ENST00000451521 HELLSQ9NRZ9 838 aa18.24■□□□□ 0.51
CCHCR1-208ENST00000451521 GOLIM4O00461 696 aa18.23■□□□□ 0.51
CCHCR1-208ENST00000451521 IFIT1P09914 478 aaKnown RBP18.23■□□□□ 0.51
CCHCR1-208ENST00000451521 ITGA6P23229 1130 aa18.23■□□□□ 0.51
CCHCR1-208ENST00000451521 TAF7LQ5H9L4 462 aa18.23■□□□□ 0.51
CCHCR1-208ENST00000451521 AK7Q96M32 723 aa18.23■□□□□ 0.51
CCHCR1-208ENST00000451521 GREM2Q9H772 168 aa18.23■□□□□ 0.51
CCHCR1-208ENST00000451521 SH2B1Q9NRF2 756 aaPredicted RBP18.23■□□□□ 0.51
CCHCR1-208ENST00000451521 ZKSCAN5Q9Y2L8 839 aa18.23■□□□□ 0.51
CCHCR1-208ENST00000451521 ITPK1Q13572 414 aa18.22■□□□□ 0.51
CCHCR1-208ENST00000451521 SMAP1Q8IYB5 467 aaPredicted RBP18.22■□□□□ 0.51
CCHCR1-208ENST00000451521 SMARCC1Q92922 1105 aaPredicted RBP18.22■□□□□ 0.51
CCHCR1-208ENST00000451521 XAGE2Q96GT9 111 aa18.22■□□□□ 0.51
CCHCR1-208ENST00000451521 LRP5O75197 1615 aa18.22■□□□□ 0.51
CCHCR1-208ENST00000451521 ANKRD18BA2A2Z9 1011 aa18.22■□□□□ 0.51
CCHCR1-208ENST00000451521 CHGBP05060 677 aa18.22■□□□□ 0.51
CCHCR1-208ENST00000451521 VPS72Q15906 364 aa18.22■□□□□ 0.51
CCHCR1-208ENST00000451521 ZMYM1Q5SVZ6 1142 aa18.22■□□□□ 0.51
CCHCR1-208ENST00000451521 SEC62Q99442 399 aaKnown RBP18.22■□□□□ 0.51
CCHCR1-208ENST00000451521 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.22■□□□□ 0.51
CCHCR1-208ENST00000451521 U3KPZ7 1027 aaPredicted RBP18.22■□□□□ 0.51
CCHCR1-208ENST00000451521 ABCC12Q96J65 1359 aa18.21■□□□□ 0.51
CCHCR1-208ENST00000451521 FAM177BA6PVY3 158 aa18.21■□□□□ 0.51
CCHCR1-208ENST00000451521 CCDC158Q5M9N0 1113 aa18.21■□□□□ 0.51
CCHCR1-208ENST00000451521 FNBP4Q8N3X1 1017 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms