RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 ECE2O60344 883 aa34.87■■■■□ 3.17
USP42-204ENST00000451154 G2E3Q7L622 706 aa34.87■■■■□ 3.17
USP42-204ENST00000451154 ZC3H12CQ9C0D7 883 aaKnown RBP34.87■■■■□ 3.17
USP42-204ENST00000451154 ANKIB1Q9P2G1 1089 aa34.87■■■■□ 3.17
USP42-204ENST00000451154 ZEB1P37275 1124 aaPredicted RBP34.86■■■■□ 3.17
USP42-204ENST00000451154 PAXIP1Q6ZW49 1069 aaPredicted RBP34.86■■■■□ 3.17
USP42-204ENST00000451154 ZC3H15Q8WU90 426 aaKnown RBP34.86■■■■□ 3.17
USP42-204ENST00000451154 PODXL2Q9NZ53 605 aa34.86■■■■□ 3.17
USP42-204ENST00000451154 SLC4A2P04920 1241 aa34.85■■■■□ 3.17
USP42-204ENST00000451154 DPF2Q92785 391 aa34.85■■■■□ 3.17
USP42-204ENST00000451154 UFL1O94874 794 aa34.84■■■■□ 3.17
USP42-204ENST00000451154 SAMD7Q7Z3H4 446 aa34.84■■■■□ 3.17
USP42-204ENST00000451154 SALL2Q9Y467 1007 aaPredicted RBP34.84■■■■□ 3.17
USP42-204ENST00000451154 CELF2O95319 508 aaKnown RBP34.83■■■■□ 3.17
USP42-204ENST00000451154 CTCFP49711 727 aaPredicted RBP34.83■■■■□ 3.17
USP42-204ENST00000451154 GRM1Q13255 1194 aa34.83■■■■□ 3.17
USP42-204ENST00000451154 CYP4F22Q6NT55 531 aa34.83■■■■□ 3.17
USP42-204ENST00000451154 CAPNS2Q96L46 248 aa34.83■■■■□ 3.17
USP42-204ENST00000451154 GGA1Q9UJY5 639 aa34.83■■■■□ 3.17
USP42-204ENST00000451154 TLL2Q9Y6L7 1015 aa34.83■■■■□ 3.17
USP42-204ENST00000451154 IL16Q14005 1332 aa34.82■■■■□ 3.17
USP42-204ENST00000451154 ANP32CO43423 234 aa34.82■■■■□ 3.16
USP42-204ENST00000451154 NEXNQ0ZGT2 675 aa34.82■■■■□ 3.16
USP42-204ENST00000451154 CWF19L2Q2TBE0 894 aaKnown RBP34.82■■■■□ 3.16
USP42-204ENST00000451154 ANKRD18AQ8IVF6 992 aa34.82■■■■□ 3.16
USP42-204ENST00000451154 RTL9Q8NET4 1388 aa34.82■■■■□ 3.16
USP42-204ENST00000451154 ZNF316A6NFI3 1004 aaPredicted RBP34.81■■■■□ 3.16
USP42-204ENST00000451154 CDC37L1Q7L3B6 337 aa34.81■■■■□ 3.16
USP42-204ENST00000451154 G3V3G9 751 aa34.8■■■■□ 3.16
USP42-204ENST00000451154 TBC1D10BQ4KMP7 808 aaPredicted RBP34.8■■■■□ 3.16
USP42-204ENST00000451154 DCAF8Q5TAQ9 597 aa34.8■■■■□ 3.16
USP42-204ENST00000451154 ZNF408Q9H9D4 720 aa34.8■■■■□ 3.16
USP42-204ENST00000451154 EGFRP00533 1210 aa34.79■■■■□ 3.16
USP42-204ENST00000451154 ECE1P42892 770 aa34.79■■■■□ 3.16
USP42-204ENST00000451154 CTSWP56202 376 aa34.79■■■■□ 3.16
USP42-204ENST00000451154 MAP2K1Q02750 393 aaPredicted RBP34.79■■■■□ 3.16
USP42-204ENST00000451154 NCBP3Q53F19 620 aaKnown RBP34.79■■■■□ 3.16
USP42-204ENST00000451154 RBM26Q5T8P6 1007 aaKnown RBP34.79■■■■□ 3.16
USP42-204ENST00000451154 USP48Q86UV5 1035 aa34.79■■■■□ 3.16
USP42-204ENST00000451154 PRDM10Q9NQV6 1147 aa34.79■■■■□ 3.16
USP42-204ENST00000451154 NEURL1BA8MQ27 555 aa34.78■■■■□ 3.16
USP42-204ENST00000451154 RPS12P25398 132 aaKnown RBP34.78■■■■□ 3.16
USP42-204ENST00000451154 TTLL11Q8NHH1 800 aa34.78■■■■□ 3.16
USP42-204ENST00000451154 POLR2AP24928 1970 aaKnown RBP34.78■■■■□ 3.16
USP42-204ENST00000451154 SCN9AQ15858 1988 aa34.77■■■■□ 3.16
USP42-204ENST00000451154 VIL1P09327 827 aaKnown RBP34.77■■■■□ 3.16
USP42-204ENST00000451154 LBX1P52954 281 aa34.77■■■■□ 3.16
USP42-204ENST00000451154 DLK2Q6UY11 383 aa34.77■■■■□ 3.16
USP42-204ENST00000451154 SAPCD2Q86UD0 394 aa34.77■■■■□ 3.16
USP42-204ENST00000451154 CDC5LQ99459 802 aaKnown RBP34.75■■■■□ 3.15
USP42-204ENST00000451154 GREM2Q9H772 168 aa34.75■■■■□ 3.15
USP42-204ENST00000451154 FANCIQ9NVI1 1328 aa34.75■■■■□ 3.15
USP42-204ENST00000451154 H7C1W4 665 aa34.74■■■■□ 3.15
USP42-204ENST00000451154 XDHP47989 1333 aa34.74■■■■□ 3.15
USP42-204ENST00000451154 WTIPA6NIX2 430 aaPredicted RBP34.73■■■■□ 3.15
USP42-204ENST00000451154 FLIIQ13045 1269 aa34.73■■■■□ 3.15
USP42-204ENST00000451154 UBE3BQ7Z3V4 1068 aa34.73■■■■□ 3.15
USP42-204ENST00000451154 WDR63Q8IWG1 891 aa34.73■■■■□ 3.15
USP42-204ENST00000451154 AOC2O75106 756 aa34.72■■■■□ 3.15
USP42-204ENST00000451154 ATP2B4P23634 1241 aa34.72■■■■□ 3.15
USP42-204ENST00000451154 VAMP4O75379 141 aa34.71■■■■□ 3.15
USP42-204ENST00000451154 HSPA8P11142 646 aaKnown RBP34.71■■■■□ 3.15
USP42-204ENST00000451154 MINPP1Q9UNW1 487 aa34.71■■■■□ 3.15
USP42-204ENST00000451154 MYH3P11055 1940 aa34.71■■■■□ 3.15
USP42-204ENST00000451154 FKBP5Q13451 457 aaPredicted RBP34.7■■■■□ 3.15
USP42-204ENST00000451154 GCKRQ14397 625 aa34.7■■■■□ 3.15
USP42-204ENST00000451154 KRT26Q7Z3Y9 468 aa34.7■■■■□ 3.15
USP42-204ENST00000451154 BSDC1Q9NW68 430 aaPredicted RBP34.7■■■■□ 3.15
USP42-204ENST00000451154 EXOSC9Q06265 439 aaKnown RBP34.69■■■■□ 3.14
USP42-204ENST00000451154 DNAAF4Q8WXU2 420 aa34.68■■■■□ 3.14
USP42-204ENST00000451154 DCPSQ96C86 337 aaKnown RBP34.68■■■■□ 3.14
USP42-204ENST00000451154 MAP2K2P36507 400 aa34.67■■■■□ 3.14
USP42-204ENST00000451154 KIF4BQ2VIQ3 1234 aa34.67■■■■□ 3.14
USP42-204ENST00000451154 RSBN1LQ6PCB5 846 aaPredicted RBP34.67■■■■□ 3.14
USP42-204ENST00000451154 BEGAINQ9BUH8 593 aa34.67■■■■□ 3.14
USP42-204ENST00000451154 CACNA1FO60840 1977 aa34.66■■■■□ 3.14
USP42-204ENST00000451154 HHIPL1Q96JK4 782 aa34.66■■■■□ 3.14
USP42-204ENST00000451154 SPINK5Q9NQ38 1064 aaPredicted RBP34.66■■■■□ 3.14
USP42-204ENST00000451154 SPEF2Q9C093 1822 aa34.65■■■■□ 3.14
USP42-204ENST00000451154 ADM5C9JUS6 153 aa34.65■■■■□ 3.14
USP42-204ENST00000451154 CASP7P55210 303 aa34.64■■■■□ 3.14
USP42-204ENST00000451154 AGBL3Q8NEM8 1001 aa34.64■■■■□ 3.14
USP42-204ENST00000451154 ASTN2O75129 1339 aaPredicted RBP34.63■■■■□ 3.13
USP42-204ENST00000451154 PODNQ7Z5L7 613 aa34.63■■■■□ 3.13
USP42-204ENST00000451154 FAM9BQ8IZU0 186 aa34.63■■■■□ 3.13
USP42-204ENST00000451154 LINS1Q8NG48 757 aa34.63■■■■□ 3.13
USP42-204ENST00000451154 PLA2G12BQ9BX93 195 aa34.63■■■■□ 3.13
USP42-204ENST00000451154 MYH16Q9H6N6 1097 aa34.63■■■■□ 3.13
USP42-204ENST00000451154 THSD7BQ9C0I4 1608 aa34.63■■■■□ 3.13
USP42-204ENST00000451154 USP17L3A6NCW0 530 aa34.62■■■■□ 3.13
USP42-204ENST00000451154 USP17L4A6NCW7 530 aa34.62■■■■□ 3.13
USP42-204ENST00000451154 IGHMBP2P38935 993 aaKnown RBP34.62■■■■□ 3.13
USP42-204ENST00000451154 CCT4P50991 539 aaKnown RBP34.62■■■■□ 3.13
USP42-204ENST00000451154 ZNF280AP59817 542 aaPredicted RBP34.62■■■■□ 3.13
USP42-204ENST00000451154 USP17L1Q7RTZ2 530 aa34.62■■■■□ 3.13
USP42-204ENST00000451154 GMLQ99445 158 aa34.62■■■■□ 3.13
USP42-204ENST00000451154 ITGA6P23229 1130 aa34.61■■■■□ 3.13
USP42-204ENST00000451154 HUNKP57058 714 aa34.61■■■■□ 3.13
USP42-204ENST00000451154 GGA3Q9NZ52 723 aa34.61■■■■□ 3.13
USP42-204ENST00000451154 CSF1RP07333 972 aa34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms